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The map label for this gene is yfcN [C]

Identifier: 157371613

GI number: 157371613

Start: 3736267

End: 3736797

Strand: Direct

Name: yfcN [C]

Synonym: Spro_3376

Alternate gene names: 157371613

Gene position: 3736267-3736797 (Clockwise)

Preceding gene: 157371606

Following gene: 157371618

Centisome position: 68.57

GC content: 56.69

Gene sequence:

>531_bases
ATGAAGAACAAGCACCCTCTGAGCAAAGATGAATTGCAGCTCTTCAGAGAGTCGGTAGTAGACGCAAAAAAGCTGCGTCA
GGACACCATTGTCCACCGTAAACCCAAGCCAAAAACCAAACAGATTGCCCCGCAGCGCCTGCTGCAGGAACAGGTGGACG
CCAGTCATTATTTCTCGGATGAATACCAACCGCAGTTGGAAGAGGAAGGCCCGACGCGCTATGTTCGCCCCGGTTACAGT
GCTTTTGAGCTGAAAAAACTGCGCCGCGGTGACTATTCACCGGAGCTGTTTCTCGATTTGCACGGTCTGACCCAAATGCA
GGCCAAGCAGGAACTGGGCGCACTGATCGCCGCTTGCCGCCGCGAACACGTGCACTGTGCCTGTGTGATGCACGGCCACG
GCAAGCATATCCTTAAACAGCAAACACCGCTGTGGCTGGCGCAGCATCCCGACGTACTGGTGTTCCACCAGGCGCCCAAG
GAATGGGGCGGGACCGCGGCCATCTTGCTGCTGGTCGAACTGGCCGAGTAA

Upstream 100 bases:

>100_bases
CGCTAACCCCTTGCGCTTTTCATTTTGGCGCGAATTTTGCGTCGACAGATACCCGCGACACGGTAAACTACCGCGATAAA
TGATTTCCGGTGAATGAAAA

Downstream 100 bases:

>100_bases
ACTGCAGAAATGACAAAAGGGCGATATTTAACATCGCCCTTTTGTTTGGAACCGGCCTGCGGCCCCTACACTTTAGCCAT
CACCTGCGACGGACTGACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKNKHPLSKDELQLFRESVVDAKKLRQDTIVHRKPKPKTKQIAPQRLLQEQVDASHYFSDEYQPQLEEEGPTRYVRPGYS
AFELKKLRRGDYSPELFLDLHGLTQMQAKQELGALIAACRREHVHCACVMHGHGKHILKQQTPLWLAQHPDVLVFHQAPK
EWGGTAAILLLVELAE

Sequences:

>Translated_176_residues
MKNKHPLSKDELQLFRESVVDAKKLRQDTIVHRKPKPKTKQIAPQRLLQEQVDASHYFSDEYQPQLEEEGPTRYVRPGYS
AFELKKLRRGDYSPELFLDLHGLTQMQAKQELGALIAACRREHVHCACVMHGHGKHILKQQTPLWLAQHPDVLVFHQAPK
EWGGTAAILLLVELAE
>Mature_176_residues
MKNKHPLSKDELQLFRESVVDAKKLRQDTIVHRKPKPKTKQIAPQRLLQEQVDASHYFSDEYQPQLEEEGPTRYVRPGYS
AFELKKLRRGDYSPELFLDLHGLTQMQAKQELGALIAACRREHVHCACVMHGHGKHILKQQTPLWLAQHPDVLVFHQAPK
EWGGTAAILLLVELAE

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain

Homologues:

Organism=Escherichia coli, GI1788671, Length=176, Percent_Identity=70.4545454545455, Blast_Score=261, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3376_SERP5 (A8GH84)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001479602.1
- ProteinModelPortal:   A8GH84
- SMR:   A8GH84
- STRING:   A8GH84
- GeneID:   5603127
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_3376
- eggNOG:   COG2840
- HOGENOM:   HBG700609
- OMA:   TRYARDD
- ProtClustDB:   PRK04946
- BioCyc:   SPRO399741:SPRO_3376-MONOMER
- HAMAP:   MF_01042
- InterPro:   IPR002625
- InterPro:   IPR022990
- SMART:   SM00463

Pfam domain/function: PF01713 Smr

EC number: NA

Molecular weight: Translated: 20269; Mature: 20269

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKHPLSKDELQLFRESVVDAKKLRQDTIVHRKPKPKTKQIAPQRLLQEQVDASHYFSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
EYQPQLEEEGPTRYVRPGYSAFELKKLRRGDYSPELFLDLHGLTQMQAKQELGALIAACR
CCCCCCCCCCCCCEECCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
REHVHCACVMHGHGKHILKQQTPLWLAQHPDVLVFHQAPKEWGGTAAILLLVELAE
HCCCEEEEEEECCCHHHHHCCCCEEEECCCCEEEEECCCHHHCCCEEHHHHHHHCC
>Mature Secondary Structure
MKNKHPLSKDELQLFRESVVDAKKLRQDTIVHRKPKPKTKQIAPQRLLQEQVDASHYFSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
EYQPQLEEEGPTRYVRPGYSAFELKKLRRGDYSPELFLDLHGLTQMQAKQELGALIAACR
CCCCCCCCCCCCCEECCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
REHVHCACVMHGHGKHILKQQTPLWLAQHPDVLVFHQAPKEWGGTAAILLLVELAE
HCCCEEEEEEECCCHHHHHCCCCEEEECCCCEEEEECCCHHHCCCEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA