| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is rcsD [H]
Identifier: 157371503
GI number: 157371503
Start: 3602311
End: 3605013
Strand: Direct
Name: rcsD [H]
Synonym: Spro_3266
Alternate gene names: 157371503
Gene position: 3602311-3605013 (Clockwise)
Preceding gene: 157371502
Following gene: 157371504
Centisome position: 66.11
GC content: 50.94
Gene sequence:
>2703_bases ATGCAAAATAAACAACTGACCATCAGCTCAAGCAATATTACTCGCTGCTTCCTGCTGTTTTCCGTGCTGCTGACGATTGC TATCGGCCTGTACGGCTACAACTATACCAACGCCTGGCTGGCGGAAAAAAAATATGCCCTGAACAGCATCGCCAACGGCC TGCAAAAGCGCATCGACAACTACCGTTACGTCACCTATCAGATTTACGACAAGTTCGGTAATGCACCTTCATTGAATGTC GATCCCAGCCTGCAGGAAACCCGACTGCGCCCGGACGTTTACTACCTGGAGAAGCCGCATAAAAAAACCGACGCGGTTAT TTTTGGCAGTCATGAAGAAGGCACCCTGGCGATGATCGCCAATATTTCAGACTATCTGGATACCCGCTGGGGGGCCAAGA CTGAAAATTACGCCATGTATTACCTCAACGGTCAGGATAACAGCCTGAGCCTAATCACCACCCAGCCGTTAAAAGAGCTG GCCTCGAGGTTCAAGGAAAGCTATCTGACGACCTCGGCAGAGGATCGCCGGGCCGAAATGCTGCAACAGGCCAATATGCT CGATGAGCGTGAAAGCTTCTCTGCCTTGCGCAAACAGCGCTTCCAGAACACCTATTCGTTTTCTATCCGCACCACTTTTA ACCAACCAGGACATTTGGCCACGGTGATCGCCTTCGATCTGCCGATTAACGACATCATCCCCATTAATATGGCGCGATCC AACTTTATGCTGCAGCCTGACGATAGCAGCATGGACGACGGTACCTTGCCGTTGGATGCCACAACCAGCACCGGTATTTC GATGAGCGGTAGTTGGGTGGAGTTCAGCGCCCCGCTGCCTAACGCGCCACTGAAAGTGGTTTACCGCGTCTCGGCTATCA GCCTGGCAATTGACCTGCTGCGAAACAATATCTGGCTGATCGCCATCAATCTGTTGCTGTTGGCGCTGTCATTGGTAGGC ATTTACTTTATCCGTCGCCAATATATCCGCCCGAGCGAAAACATGGCGGTTGAGCTGGAAGCCGAACGAGCACTGAATCA GGAAATTATCGCCAGCCTGCCATCAGGCCTGCTGGTGTACAATTTCGCCAGCAATACGGTAATCGCCAGTAACAAGATTG CCCAGCACCTGCTGCCGCACCTCAGCCTGCAGAAAATCGCCCACATGGCCGAACAGCATCACGGTGTGATTCAGGCGACG GTAAACAATGAAGTGTATGAGATCCGCATCTTCCGCAGCCAGCTGTCGCCGGAAACCTACCTGTTCCTGCTTAACGATCA GGACAAGGAAGTGATGGTCAATAAACGTTTGCAGCAGGCACAGCGCGAGTACGACAAGAACGTACAGGCACGCAAACTGA TGTTGCATAATCTGGGCATTGAGCTGAATCAACCGGTCCGGCAAATGCACGATTTGGTCGATCGTCTGCGCACACAAGCG GATGAGGAACAACAGCAAGCGCTGCAAAAGCAACTGGCGGTTCAGTCGTCAACGGTGTTGGGGCTGATTGAAAATATCAC CCTGCTCACCCGGTTGGAAACCCAGGACTGGCAGCCTTCGCGTCATCCCTTCAGCCCATCGACCCTGATAGATGAATTGC TGCAGGAAGCCCTGCCGTCCATCAATCAAAAAGGCCTGTCGCTGTTCAACCATTTCCATCTTGACGTTGAACAGCAATAT ATCGGCGATGCCAATGCACTGCGCAAGGTGATCTCACTGCTGGTGCATTACGCCATTATCACTACTGCCTGTGGCAAGAT TTCGCTGGTTGTCGATCATGAACCGGATCACCCCGATCGCCTGGTATTCCATATCAATGACACCGGTTCGGGCATTTCCA ACGAAGAAATCAGCAACCTGAATTACCCGTTCCTCAGCCAAACGCTGGTGGACCGCTTTGATCATGGCTCCGGCCTCACC TTCTTCCTGTGTAATCAACTGTGCAAAAAGCTTAACGGCCAGTTGGATATCCGCAGCAAGATAGACATCGGTACCCGCTA CACCATCCGCGTGCCTATGGAGATGGAGAAAAAAGAGGCGGAAGCGCAAGAAAAATTGCTCGACGGTGTGACCGCCTTGC TGGACATTACTTCTGAGGAAATACGGAGCATTGTCACCCGCCTGCTGCATGCCTATGGCGCAAGTTGCATCGTTGCTGAC GAACGTCAGATTAATCGTGACTACGACGTATTGTTGACCGATAACCCGCAAAGAGCTGATGATTATACCCTGCTGCTGAC CAGCGATGAGGCCGGATGGCAACAGCTTGAAAAACGGTATATTCGGGTAAACTATAACCTGAGTGGTGCCATGATCGACG CCGTATTGATGCTGATTGAGCAGCAAATGGCCGCGTTGGAACAGCAGGAAAGTGCATTATCACTGACCGCAGATGACATC CAACTCTATGAAAAACAATTGAAATCAAGTGATTACTATGGCCTATTTATTGATACAGTACCCGACGATGTCAAAAAACT GTATACTGAGGCGGGCAGCAGTGATTTCAATGCTCTGTCACAGACAGCACACCGCCTGAAAGGCGTGTTTGCCATGTTAA ATCTGCTTCCCGGCAAGCAACTGTGTGAATCGTTAGAACAGCACATCGCAGACGGTGATGCGCTCAAGATCGAGAATAAC ATCAGTCAGATTGATTTTTTCGTCAGTAGACTGCTGCAGCAAGGTAGCCAACAACATGAATAA
Upstream 100 bases:
>100_bases CAGCCTGACGGCGGCATTTGCCTGCGTTGCAGTTTTACTCCTGGTGGTCACCGCCAGCGCCCGGGCGATAACCCGTTGAT TCAGGAATGCGCAGTCAACT
Downstream 100 bases:
>100_bases CCTGAACGTAATTATTGCTGATGACCATCCTATCGTACTGTTTGGCATCCGGAAGTCACTTGAGCAAATTGAATGGGTGA ATGTCGTTGGGGAGTTTGAA
Product: phosphotransfer intermediate protein in two-component regulatory system with RcsBC
Products: NA
Alternate protein names: Phosphotransfer intermediate RcsD [H]
Number of amino acids: Translated: 900; Mature: 900
Protein sequence:
>900_residues MQNKQLTISSSNITRCFLLFSVLLTIAIGLYGYNYTNAWLAEKKYALNSIANGLQKRIDNYRYVTYQIYDKFGNAPSLNV DPSLQETRLRPDVYYLEKPHKKTDAVIFGSHEEGTLAMIANISDYLDTRWGAKTENYAMYYLNGQDNSLSLITTQPLKEL ASRFKESYLTTSAEDRRAEMLQQANMLDERESFSALRKQRFQNTYSFSIRTTFNQPGHLATVIAFDLPINDIIPINMARS NFMLQPDDSSMDDGTLPLDATTSTGISMSGSWVEFSAPLPNAPLKVVYRVSAISLAIDLLRNNIWLIAINLLLLALSLVG IYFIRRQYIRPSENMAVELEAERALNQEIIASLPSGLLVYNFASNTVIASNKIAQHLLPHLSLQKIAHMAEQHHGVIQAT VNNEVYEIRIFRSQLSPETYLFLLNDQDKEVMVNKRLQQAQREYDKNVQARKLMLHNLGIELNQPVRQMHDLVDRLRTQA DEEQQQALQKQLAVQSSTVLGLIENITLLTRLETQDWQPSRHPFSPSTLIDELLQEALPSINQKGLSLFNHFHLDVEQQY IGDANALRKVISLLVHYAIITTACGKISLVVDHEPDHPDRLVFHINDTGSGISNEEISNLNYPFLSQTLVDRFDHGSGLT FFLCNQLCKKLNGQLDIRSKIDIGTRYTIRVPMEMEKKEAEAQEKLLDGVTALLDITSEEIRSIVTRLLHAYGASCIVAD ERQINRDYDVLLTDNPQRADDYTLLLTSDEAGWQQLEKRYIRVNYNLSGAMIDAVLMLIEQQMAALEQQESALSLTADDI QLYEKQLKSSDYYGLFIDTVPDDVKKLYTEAGSSDFNALSQTAHRLKGVFAMLNLLPGKQLCESLEQHIADGDALKIENN ISQIDFFVSRLLQQGSQQHE
Sequences:
>Translated_900_residues MQNKQLTISSSNITRCFLLFSVLLTIAIGLYGYNYTNAWLAEKKYALNSIANGLQKRIDNYRYVTYQIYDKFGNAPSLNV DPSLQETRLRPDVYYLEKPHKKTDAVIFGSHEEGTLAMIANISDYLDTRWGAKTENYAMYYLNGQDNSLSLITTQPLKEL ASRFKESYLTTSAEDRRAEMLQQANMLDERESFSALRKQRFQNTYSFSIRTTFNQPGHLATVIAFDLPINDIIPINMARS NFMLQPDDSSMDDGTLPLDATTSTGISMSGSWVEFSAPLPNAPLKVVYRVSAISLAIDLLRNNIWLIAINLLLLALSLVG IYFIRRQYIRPSENMAVELEAERALNQEIIASLPSGLLVYNFASNTVIASNKIAQHLLPHLSLQKIAHMAEQHHGVIQAT VNNEVYEIRIFRSQLSPETYLFLLNDQDKEVMVNKRLQQAQREYDKNVQARKLMLHNLGIELNQPVRQMHDLVDRLRTQA DEEQQQALQKQLAVQSSTVLGLIENITLLTRLETQDWQPSRHPFSPSTLIDELLQEALPSINQKGLSLFNHFHLDVEQQY IGDANALRKVISLLVHYAIITTACGKISLVVDHEPDHPDRLVFHINDTGSGISNEEISNLNYPFLSQTLVDRFDHGSGLT FFLCNQLCKKLNGQLDIRSKIDIGTRYTIRVPMEMEKKEAEAQEKLLDGVTALLDITSEEIRSIVTRLLHAYGASCIVAD ERQINRDYDVLLTDNPQRADDYTLLLTSDEAGWQQLEKRYIRVNYNLSGAMIDAVLMLIEQQMAALEQQESALSLTADDI QLYEKQLKSSDYYGLFIDTVPDDVKKLYTEAGSSDFNALSQTAHRLKGVFAMLNLLPGKQLCESLEQHIADGDALKIENN ISQIDFFVSRLLQQGSQQHE >Mature_900_residues MQNKQLTISSSNITRCFLLFSVLLTIAIGLYGYNYTNAWLAEKKYALNSIANGLQKRIDNYRYVTYQIYDKFGNAPSLNV DPSLQETRLRPDVYYLEKPHKKTDAVIFGSHEEGTLAMIANISDYLDTRWGAKTENYAMYYLNGQDNSLSLITTQPLKEL ASRFKESYLTTSAEDRRAEMLQQANMLDERESFSALRKQRFQNTYSFSIRTTFNQPGHLATVIAFDLPINDIIPINMARS NFMLQPDDSSMDDGTLPLDATTSTGISMSGSWVEFSAPLPNAPLKVVYRVSAISLAIDLLRNNIWLIAINLLLLALSLVG IYFIRRQYIRPSENMAVELEAERALNQEIIASLPSGLLVYNFASNTVIASNKIAQHLLPHLSLQKIAHMAEQHHGVIQAT VNNEVYEIRIFRSQLSPETYLFLLNDQDKEVMVNKRLQQAQREYDKNVQARKLMLHNLGIELNQPVRQMHDLVDRLRTQA DEEQQQALQKQLAVQSSTVLGLIENITLLTRLETQDWQPSRHPFSPSTLIDELLQEALPSINQKGLSLFNHFHLDVEQQY IGDANALRKVISLLVHYAIITTACGKISLVVDHEPDHPDRLVFHINDTGSGISNEEISNLNYPFLSQTLVDRFDHGSGLT FFLCNQLCKKLNGQLDIRSKIDIGTRYTIRVPMEMEKKEAEAQEKLLDGVTALLDITSEEIRSIVTRLLHAYGASCIVAD ERQINRDYDVLLTDNPQRADDYTLLLTSDEAGWQQLEKRYIRVNYNLSGAMIDAVLMLIEQQMAALEQQESALSLTADDI QLYEKQLKSSDYYGLFIDTVPDDVKKLYTEAGSSDFNALSQTAHRLKGVFAMLNLLPGKQLCESLEQHIADGDALKIENN ISQIDFFVSRLLQQGSQQHE
Specific function: May serves as a phosphotransfer intermediate between RcsC and RcsB. It may acquire a phosphoryl group at His-842 from RcsC 'Asp-866' and transmit it to 'Asp-56' of RcsB [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPt domain [H]
Homologues:
Organism=Escherichia coli, GI1788545, Length=904, Percent_Identity=47.787610619469, Blast_Score=784, Evalue=0.0, Organism=Escherichia coli, GI145693157, Length=522, Percent_Identity=25.8620689655172, Blast_Score=136, Evalue=5e-33, Organism=Escherichia coli, GI1788713, Length=433, Percent_Identity=24.4803695150115, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR008207 - InterPro: IPR005467 [H]
Pfam domain/function: PF02518 HATPase_c; PF01627 Hpt [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 102152; Mature: 102152
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS50894 HPT ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNKQLTISSSNITRCFLLFSVLLTIAIGLYGYNYTNAWLAEKKYALNSIANGLQKRIDN CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC YRYVTYQIYDKFGNAPSLNVDPSLQETRLRPDVYYLEKPHKKTDAVIFGSHEEGTLAMIA CEEEEEEEEECCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCEEEECCCCCCCEEEEE NISDYLDTRWGAKTENYAMYYLNGQDNSLSLITTQPLKELASRFKESYLTTSAEDRRAEM CHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHH LQQANMLDERESFSALRKQRFQNTYSFSIRTTFNQPGHLATVIAFDLPINDIIPINMARS HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEECCCCCEEECEECCC NFMLQPDDSSMDDGTLPLDATTSTGISMSGSWVEFSAPLPNAPLKVVYRVSAISLAIDLL CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH RNNIWLIAINLLLLALSLVGIYFIRRQYIRPSENMAVELEAERALNQEIIASLPSGLLVY HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCCEEEE NFASNTVIASNKIAQHLLPHLSLQKIAHMAEQHHGVIQATVNNEVYEIRIFRSQLSPETY EECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEHHHCCCCEE LFLLNDQDKEVMVNKRLQQAQREYDKNVQARKLMLHNLGIELNQPVRQMHDLVDRLRTQA EEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC DEEQQQALQKQLAVQSSTVLGLIENITLLTRLETQDWQPSRHPFSPSTLIDELLQEALPS CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCC INQKGLSLFNHFHLDVEQQYIGDANALRKVISLLVHYAIITTACGKISLVVDHEPDHPDR CCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCE LVFHINDTGSGISNEEISNLNYPFLSQTLVDRFDHGSGLTFFLCNQLCKKLNGQLDIRSK EEEEECCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEE IDIGTRYTIRVPMEMEKKEAEAQEKLLDGVTALLDITSEEIRSIVTRLLHAYGASCIVAD ECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEC ERQINRDYDVLLTDNPQRADDYTLLLTSDEAGWQQLEKRYIRVNYNLSGAMIDAVLMLIE CHHCCCCCEEEEECCCCCCCCEEEEEECCCHHHHHHHCCEEEEEECCCHHHHHHHHHHHH QQMAALEQQESALSLTADDIQLYEKQLKSSDYYGLFIDTVPDDVKKLYTEAGSSDFNALS HHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCHHHHHH QTAHRLKGVFAMLNLLPGKQLCESLEQHIADGDALKIENNISQIDFFVSRLLQQGSQQHE HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQNKQLTISSSNITRCFLLFSVLLTIAIGLYGYNYTNAWLAEKKYALNSIANGLQKRIDN CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC YRYVTYQIYDKFGNAPSLNVDPSLQETRLRPDVYYLEKPHKKTDAVIFGSHEEGTLAMIA CEEEEEEEEECCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCEEEECCCCCCCEEEEE NISDYLDTRWGAKTENYAMYYLNGQDNSLSLITTQPLKELASRFKESYLTTSAEDRRAEM CHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHH LQQANMLDERESFSALRKQRFQNTYSFSIRTTFNQPGHLATVIAFDLPINDIIPINMARS HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEECCCCCEEECEECCC NFMLQPDDSSMDDGTLPLDATTSTGISMSGSWVEFSAPLPNAPLKVVYRVSAISLAIDLL CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH RNNIWLIAINLLLLALSLVGIYFIRRQYIRPSENMAVELEAERALNQEIIASLPSGLLVY HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCCEEEE NFASNTVIASNKIAQHLLPHLSLQKIAHMAEQHHGVIQATVNNEVYEIRIFRSQLSPETY EECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEHHHCCCCEE LFLLNDQDKEVMVNKRLQQAQREYDKNVQARKLMLHNLGIELNQPVRQMHDLVDRLRTQA EEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC DEEQQQALQKQLAVQSSTVLGLIENITLLTRLETQDWQPSRHPFSPSTLIDELLQEALPS CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCC INQKGLSLFNHFHLDVEQQYIGDANALRKVISLLVHYAIITTACGKISLVVDHEPDHPDR CCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCE LVFHINDTGSGISNEEISNLNYPFLSQTLVDRFDHGSGLTFFLCNQLCKKLNGQLDIRSK EEEEECCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEE IDIGTRYTIRVPMEMEKKEAEAQEKLLDGVTALLDITSEEIRSIVTRLLHAYGASCIVAD ECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEC ERQINRDYDVLLTDNPQRADDYTLLLTSDEAGWQQLEKRYIRVNYNLSGAMIDAVLMLIE CHHCCCCCEEEEECCCCCCCCEEEEEECCCHHHHHHHCCEEEEEECCCHHHHHHHHHHHH QQMAALEQQESALSLTADDIQLYEKQLKSSDYYGLFIDTVPDDVKKLYTEAGSSDFNALS HHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCHHHHHH QTAHRLKGVFAMLNLLPGKQLCESLEQHIADGDALKIENNISQIDFFVSRLLQQGSQQHE HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 2404948; 7984428; 11758943; 11309126 [H]