Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

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The map label for this gene is ybjJ [C]

Identifier: 157371502

GI number: 157371502

Start: 3601135

End: 3602289

Strand: Direct

Name: ybjJ [C]

Synonym: Spro_3265

Alternate gene names: 157371502

Gene position: 3601135-3602289 (Clockwise)

Preceding gene: 157371499

Following gene: 157371503

Centisome position: 66.09

GC content: 59.13

Gene sequence:

>1155_bases
ATGACATCCACCTTGTGTAATGAACAGCAGAAACCCGGCGTCCCGGCACAGATCGCAACGCGTTTGGCCTTTTTTGTCGC
CGGCTTCGGCATGGCTGCCTGGGCTCCCCTGGTCCCTTTCGCCAAAGCGCGTATCGGCATTGATGACGGCTCCCTGGGTC
TGCTGCTGCTGTGTATTGGCGCAGGTTCGATGTTGGCGATGCCGCTTACCGGCTTCCTGACCGGCAGGTTGGGCTGTCGC
CCGGTGATCCTGCTGGCCGGGCTGGCACTGTGTATTGATTTACCCCTGCTGGTCCTGATGGACACCACCACCGGTATGGC
ACTGGCCCTGCTGTTGTTTGGTGCGGCAATCGGCATGATCGATGTGTCGATGAACATACAGGCGGTAGTGGTCGAGCGCG
CCAGCGGCAAGGCAATGATGTCCGGCTTTCACGGTTTCTTCAGCGTTGGCGGCATTGCCGGTGCCGGCGGTGTTAGTGTG
ATGCTGTGGCTGGGGCTGTCTCCTTTGCTGGCAACATGGGTCGCCGTATTGACCATTGCCGCATTGCTGATGCTGGCCAG
TCGCAATTTGCTGCGTGAAAGCGGCGGTGACGAAGGTGGCCCGATGTTTGTGCTGCCACGCGGTTGGGTGATGTTCATTG
GCATCCTGTGCTTCATTATGTTCCTGGCAGAAGGTTCGATGCTCGACTGGAGCGCCCTGTTTCTCACCACCCTGCGAGGC
GTTGACCACAGCCAGGCCGGATTGGGCTATGCGCTGTTCTCCATCACCATGACCATCGGCAGATTGAACGGCGATTGGGT
GGTAAACCGGCTGGGCAGATATAAAGTATTGCTGCTGGGTAGCCTGTGTGCGGCCATTGGCCTGAGTCTGGCCATTATCT
TCAACAACGCCATGGTTTCACTGATTGGTTTTATGCTGGTGGGCCTCGGCGCTTCCAACGTGGTACCGATCCTGTTCAGT
GCTGCCGGCAACCAGCAGGATATGCCGGCAAATCTGGCCATCGCATCAGTGACCACCGTCGGCTACGCCGGCATCCTCGC
CGGACCGGCGCTGATTGGCTTTATCGCTCAGTTCTCCAGCCTGACGGCGGCATTTGCCTGCGTTGCAGTTTTACTCCTGG
TGGTCACCGCCAGCGCCCGGGCGATAACCCGTTGA

Upstream 100 bases:

>100_bases
GCGCGGGCGAGCGCAAATCCTTTCGACCCGGATCGCGGATTGTGATAAAAACACTCCATAACTTTCAGCCCGCATTTCCA
CAATAGATCCTGATTCCCAC

Downstream 100 bases:

>100_bases
TTCAGGAATGCGCAGTCAACTATGCAAAATAAACAACTGACCATCAGCTCAAGCAATATTACTCGCTGCTTCCTGCTGTT
TTCCGTGCTGCTGACGATTG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MTSTLCNEQQKPGVPAQIATRLAFFVAGFGMAAWAPLVPFAKARIGIDDGSLGLLLLCIGAGSMLAMPLTGFLTGRLGCR
PVILLAGLALCIDLPLLVLMDTTTGMALALLLFGAAIGMIDVSMNIQAVVVERASGKAMMSGFHGFFSVGGIAGAGGVSV
MLWLGLSPLLATWVAVLTIAALLMLASRNLLRESGGDEGGPMFVLPRGWVMFIGILCFIMFLAEGSMLDWSALFLTTLRG
VDHSQAGLGYALFSITMTIGRLNGDWVVNRLGRYKVLLLGSLCAAIGLSLAIIFNNAMVSLIGFMLVGLGASNVVPILFS
AAGNQQDMPANLAIASVTTVGYAGILAGPALIGFIAQFSSLTAAFACVAVLLLVVTASARAITR

Sequences:

>Translated_384_residues
MTSTLCNEQQKPGVPAQIATRLAFFVAGFGMAAWAPLVPFAKARIGIDDGSLGLLLLCIGAGSMLAMPLTGFLTGRLGCR
PVILLAGLALCIDLPLLVLMDTTTGMALALLLFGAAIGMIDVSMNIQAVVVERASGKAMMSGFHGFFSVGGIAGAGGVSV
MLWLGLSPLLATWVAVLTIAALLMLASRNLLRESGGDEGGPMFVLPRGWVMFIGILCFIMFLAEGSMLDWSALFLTTLRG
VDHSQAGLGYALFSITMTIGRLNGDWVVNRLGRYKVLLLGSLCAAIGLSLAIIFNNAMVSLIGFMLVGLGASNVVPILFS
AAGNQQDMPANLAIASVTTVGYAGILAGPALIGFIAQFSSLTAAFACVAVLLLVVTASARAITR
>Mature_383_residues
TSTLCNEQQKPGVPAQIATRLAFFVAGFGMAAWAPLVPFAKARIGIDDGSLGLLLLCIGAGSMLAMPLTGFLTGRLGCRP
VILLAGLALCIDLPLLVLMDTTTGMALALLLFGAAIGMIDVSMNIQAVVVERASGKAMMSGFHGFFSVGGIAGAGGVSVM
LWLGLSPLLATWVAVLTIAALLMLASRNLLRESGGDEGGPMFVLPRGWVMFIGILCFIMFLAEGSMLDWSALFLTTLRGV
DHSQAGLGYALFSITMTIGRLNGDWVVNRLGRYKVLLLGSLCAAIGLSLAIIFNNAMVSLIGFMLVGLGASNVVPILFSA
AGNQQDMPANLAIASVTTVGYAGILAGPALIGFIAQFSSLTAAFACVAVLLLVVTASARAITR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787068, Length=372, Percent_Identity=30.3763440860215, Blast_Score=140, Evalue=2e-34,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 39694; Mature: 39563

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTLCNEQQKPGVPAQIATRLAFFVAGFGMAAWAPLVPFAKARIGIDDGSLGLLLLCIG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHC
AGSMLAMPLTGFLTGRLGCRPVILLAGLALCIDLPLLVLMDTTTGMALALLLFGAAIGMI
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHE
DVSMNIQAVVVERASGKAMMSGFHGFFSVGGIAGAGGVSVMLWLGLSPLLATWVAVLTIA
EECCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH
ALLMLASRNLLRESGGDEGGPMFVLPRGWVMFIGILCFIMFLAEGSMLDWSALFLTTLRG
HHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
VDHSQAGLGYALFSITMTIGRLNGDWVVNRLGRYKVLLLGSLCAAIGLSLAIIFNNAMVS
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGFMLVGLGASNVVPILFSAAGNQQDMPANLAIASVTTVGYAGILAGPALIGFIAQFSS
HHHHHHHHCCCCCHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAAFACVAVLLLVVTASARAITR
HHHHHHHHHHHHHHHHHCHHHHCC
>Mature Secondary Structure 
TSTLCNEQQKPGVPAQIATRLAFFVAGFGMAAWAPLVPFAKARIGIDDGSLGLLLLCIG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHC
AGSMLAMPLTGFLTGRLGCRPVILLAGLALCIDLPLLVLMDTTTGMALALLLFGAAIGMI
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHE
DVSMNIQAVVVERASGKAMMSGFHGFFSVGGIAGAGGVSVMLWLGLSPLLATWVAVLTIA
EECCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH
ALLMLASRNLLRESGGDEGGPMFVLPRGWVMFIGILCFIMFLAEGSMLDWSALFLTTLRG
HHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
VDHSQAGLGYALFSITMTIGRLNGDWVVNRLGRYKVLLLGSLCAAIGLSLAIIFNNAMVS
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGFMLVGLGASNVVPILFSAAGNQQDMPANLAIASVTTVGYAGILAGPALIGFIAQFSS
HHHHHHHHCCCCCHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAAFACVAVLLLVVTASARAITR
HHHHHHHHHHHHHHHHHCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]