| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yeiR [H]
Identifier: 157371478
GI number: 157371478
Start: 3574691
End: 3575665
Strand: Direct
Name: yeiR [H]
Synonym: Spro_3241
Alternate gene names: 157371478
Gene position: 3574691-3575665 (Clockwise)
Preceding gene: 157371476
Following gene: 157371479
Centisome position: 65.6
GC content: 56.41
Gene sequence:
>975_bases ATGACCAAAACTAACCTGATCACCGGTTTTCTCGGCAGCGGTAAAACCACCACCATTCGTCACTTGCTGGCTAACAAACC GGAACATGAGCGTTGGGCAGTGCTGGTAAACGAGTTTGGTGAAATTGGTATTGATGGCGCATTGCTGGCAGACAGCGGTG CGGTGTTAAAGGAGATCCCTGGCGGTTGTATGTGTTGTGTGAACGGCTTGCCGATGCAGGTCGGGCTGAATATGCTGCTG CAACAGAGTAAACCCGACCGTCTGTTGATCGAACCTACCGGCCTGGGCCACCCGAAACAGATCCTGTCATTGCTGATGCA GGACAGCTACGCCGGCTGGATCGATCTACAGGCCACCCTGTGCCTGTTGGACGCACGTCAGCTCAGCGAACCGCGCTATG TAGAAAACGAAAACTTCCGCGATCAACTGGCGGCGGCCGACGTTATTCTGGCCAGCAAAAGCGACACCTATCAGCCGCAG GATCTGCTGGCCCTGCAGCAATGGGCGCAGCAGGACTCCCTGCAGCGGCCGCTTTATCACATTCAACAGGGCCGGGCGGA TGTCACCTTGCTGGACCTGCCTCGCACGAATCGCACAGAATTACCGAATGCCCAGCATCATCATAGCCACAGCAAAACAC AGGGCTTGGCCGCATTGCGGCTGCCGGAAACTTCGCGCTGGCGGCGAGCGCTCAATCAGGGCCAGGGATTTACCAGCTGT GGCTGGATCTTTGACGCCGACACGGTATTCGATACCGTTGGCATCATGGAGTGGATACGGCTGGCACCGGTCGAACGCGC CAAAGGCGTAGTGCGCATTGCTGAAGGCACTCTGTTGATCAACCGTCAGGGGCAGGATCTCAATATCGAAACGCGTCCTG TCGCGCCGCTGGACAGCCGAATTGAACTGATTCACAGCGGGAACGCGGATTGGAACGCGCTGCAATCCAAGCTGTTTAAC ATTCGTTTAAGTTGA
Upstream 100 bases:
>100_bases AATTTGTGACCTGACGCAGGTTGAGCAACCTCAAGTGCTAAGGCAAAGCAGGGTTGCTTATTTATTGACCAATAGACATT ATTAACATCAGGAATAATTT
Downstream 100 bases:
>100_bases GAACTTTACCGTTAGCCTCTTTTTATTTTTAGACTTAAAACAGGTTATGCCATGACTCGCCGCAATTTACCCTTCATCAT TTTCTTCAATTTATTGGGCA
Product: cobalamin synthesis protein P47K
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTKTNLITGFLGSGKTTTIRHLLANKPEHERWAVLVNEFGEIGIDGALLADSGAVLKEIPGGCMCCVNGLPMQVGLNMLL QQSKPDRLLIEPTGLGHPKQILSLLMQDSYAGWIDLQATLCLLDARQLSEPRYVENENFRDQLAAADVILASKSDTYQPQ DLLALQQWAQQDSLQRPLYHIQQGRADVTLLDLPRTNRTELPNAQHHHSHSKTQGLAALRLPETSRWRRALNQGQGFTSC GWIFDADTVFDTVGIMEWIRLAPVERAKGVVRIAEGTLLINRQGQDLNIETRPVAPLDSRIELIHSGNADWNALQSKLFN IRLS
Sequences:
>Translated_324_residues MTKTNLITGFLGSGKTTTIRHLLANKPEHERWAVLVNEFGEIGIDGALLADSGAVLKEIPGGCMCCVNGLPMQVGLNMLL QQSKPDRLLIEPTGLGHPKQILSLLMQDSYAGWIDLQATLCLLDARQLSEPRYVENENFRDQLAAADVILASKSDTYQPQ DLLALQQWAQQDSLQRPLYHIQQGRADVTLLDLPRTNRTELPNAQHHHSHSKTQGLAALRLPETSRWRRALNQGQGFTSC GWIFDADTVFDTVGIMEWIRLAPVERAKGVVRIAEGTLLINRQGQDLNIETRPVAPLDSRIELIHSGNADWNALQSKLFN IRLS >Mature_323_residues TKTNLITGFLGSGKTTTIRHLLANKPEHERWAVLVNEFGEIGIDGALLADSGAVLKEIPGGCMCCVNGLPMQVGLNMLLQ QSKPDRLLIEPTGLGHPKQILSLLMQDSYAGWIDLQATLCLLDARQLSEPRYVENENFRDQLAAADVILASKSDTYQPQD LLALQQWAQQDSLQRPLYHIQQGRADVTLLDLPRTNRTELPNAQHHHSHSKTQGLAALRLPETSRWRRALNQGQGFTSCG WIFDADTVFDTVGIMEWIRLAPVERAKGVVRIAEGTLLINRQGQDLNIETRPVAPLDSRIELIHSGNADWNALQSKLFNI RLS
Specific function: Unknown
COG id: COG0523
COG function: function code R; Putative GTPases (G3E family)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cobW C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI223941779, Length=239, Percent_Identity=30.9623430962343, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI126722884, Length=202, Percent_Identity=31.6831683168317, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI33469141, Length=202, Percent_Identity=31.6831683168317, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI148727351, Length=202, Percent_Identity=31.1881188118812, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI146231952, Length=202, Percent_Identity=31.1881188118812, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI223941776, Length=196, Percent_Identity=30.6122448979592, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1788499, Length=325, Percent_Identity=69.8461538461538, Blast_Score=459, Evalue=1e-130, Organism=Escherichia coli, GI87082430, Length=194, Percent_Identity=30.9278350515464, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003495 - InterPro: IPR011629 [H]
Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]
EC number: NA
Molecular weight: Translated: 36075; Mature: 35944
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTNLITGFLGSGKTTTIRHLLANKPEHERWAVLVNEFGEIGIDGALLADSGAVLKEIP CCCCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHCC GGCMCCVNGLPMQVGLNMLLQQSKPDRLLIEPTGLGHPKQILSLLMQDSYAGWIDLQATL CCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEHHHHH CLLDARQLSEPRYVENENFRDQLAAADVILASKSDTYQPQDLLALQQWAQQDSLQRPLYH HHHHHHHCCCCCCCCCCCHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH IQQGRADVTLLDLPRTNRTELPNAQHHHSHSKTQGLAALRLPETSRWRRALNQGQGFTSC HHCCCCCEEEEECCCCCCCCCCCCHHHCCCHHHCCEEEEECCCHHHHHHHHHHCCCCCCC GWIFDADTVFDTVGIMEWIRLAPVERAKGVVRIAEGTLLINRQGQDLNIETRPVAPLDSR CEEEECHHHHHHHHHHHHHHHCCHHHHCCEEEEECCEEEEECCCCCCCCCCCCCCCCCHH IELIHSGNADWNALQSKLFNIRLS HHEEECCCCCHHHHHHHHEEEECC >Mature Secondary Structure TKTNLITGFLGSGKTTTIRHLLANKPEHERWAVLVNEFGEIGIDGALLADSGAVLKEIP CCCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHCC GGCMCCVNGLPMQVGLNMLLQQSKPDRLLIEPTGLGHPKQILSLLMQDSYAGWIDLQATL CCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEHHHHH CLLDARQLSEPRYVENENFRDQLAAADVILASKSDTYQPQDLLALQQWAQQDSLQRPLYH HHHHHHHCCCCCCCCCCCHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH IQQGRADVTLLDLPRTNRTELPNAQHHHSHSKTQGLAALRLPETSRWRRALNQGQGFTSC HHCCCCCEEEEECCCCCCCCCCCCHHHCCCHHHCCEEEEECCCHHHHHHHHHHCCCCCCC GWIFDADTVFDTVGIMEWIRLAPVERAKGVVRIAEGTLLINRQGQDLNIETRPVAPLDSR CEEEECHHHHHHHHHHHHHHHCCHHHHCCEEEEECCEEEEECCCCCCCCCCCCCCCCCHH IELIHSGNADWNALQSKLFNIRLS HHEEECCCCCHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]