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The map label for this gene is fliF [H]

Identifier: 157371187

GI number: 157371187

Start: 3247217

End: 3248908

Strand: Direct

Name: fliF [H]

Synonym: Spro_2947

Alternate gene names: 157371187

Gene position: 3247217-3248908 (Clockwise)

Preceding gene: 157371184

Following gene: 157371188

Centisome position: 59.59

GC content: 59.63

Gene sequence:

>1692_bases
ATGAGTGCTTCAATCTCCGCCACCGAAAGCCGCGATAATGGCCTGCAAGCCATGTGGAACCGTCTGCGCGCCAACCCGAA
AATCCCACTGCTGATCGCCGCTTCCGCCGCCATCGCCATTGTGGTCGCGCTGCTGTTATGGGCAAAAAGTCCTGATTACC
GGGTGCTGTACAGCAACATTAACGATCGCGACGGCGGTGCCATCGTCACCCAACTGACGCAGATGAACATCCCCTTCCGC
TTTGCCGAAAATGGCGCGGCGCTGCTGATCCCGGCAGACAAAGTGCACGAAACCCGCCTGCGTCTGGCGCAGTTGGGCCT
GCCGAAAGGCGGTGCCGTTGGCTTCGAACTGCTGGATCAGGAAAAATTCGGTATCAGCCAGTTCAGTGAGCAAATCAACT
ACCAGCGCGCGCTGGAAGGCGAATTGTCACGCACCATCGAATCGCTGGGGCCGGTACAAAACGCCCGGGTGCATCTGGCT
CTGCCAAAACCCTCGCTGTTCGTGCGCGAGCAAAAATCCCCTTCCGCCTCGGTGACACTGACGCTGCAACCCGGCCGCGC
GTTGGATGACGGCCAGATCAATGCCATCGTTTATATGGTCTCGAGCAGCGTCGCCGGCCTGCCGCCGGGCAACGTGACCG
TGGTCGATCAATCCGGTCGCCTGCTGACCCAGTCTGACGGTGCCGGGCGCGATCTGAACGCCGCTCAGCTCAAGTACGCC
AACGAAGTGGAAAGCCGCTATCAACGTCGCATCGAAGCGATTTTGGCACCGATGGTCGGTAACGGTAACGCGCGCGCCCA
GGTCACTGCGCAGATTGATTTTGCCACCCGCGAGCAAACCGACGAAGAATACCAACCGAACCAACTGCCGAATAAGGCCG
CCGTCCGTTCCAAACAGATGAGTCAAAGCGATCAAATTGGCGGACCACTGGTCGGTGGCGTACCGGGTGCCTTGTCCAAT
CAGCCTAGCGCTCCAGCGACCGCGCCGATTGAAACCGCCAAACCGGCGGCCACCGGCAACAACGCCAACGCCACCCAGCC
CAATGCCGCGGCAACCCGCAGCGCAGCCTCGGGGCCGCAGAATTCACGCCTGGATGAAACCACCAACTACGAAGTCGATC
GCACCATCCGCCATACCCAGCAAAAAGCCGGGACGGTACAGCGGTTGTCGGTGGCAGTGGTGGTTAACTATCGCGGTACG
GATAAAGACGGCAAACCACTGCCGATGAGTAAAGAGCAGTTGGCGCAGATCGAATCGCTGGTGCGCGAGTCCATGGGTTT
CTCCAGCACCCGCGGCGACACGCTCAACGTGGTCAACACGCCGTTTACCGATAACGAAGTCACCGGCGGTGAGCTGCCGT
TCTGGCAAAGCCAGGCGTTTATCGATCGTCTGTTCGACGCCGGTCGCTATCTGCTGGTCCTGCTGGTCGGCTGGTTGCTA
TGGCGCAAACTGGTACGTCCGCAGCTGCAAAACCGTCAGGCCGTACAAAAAGCCGCTATCGCCGCCGCCAATACGCCAAT
GGCCAAACCGGCAGAGAGCAATAAACAGAGTAACGAGGAGCTGGCGCAGCACCGTAAATCACAACAGCGCGTCAGTGCAG
AAGTCCAGAGCCAGCGGATCCGCGATCTGGCTGATAAAGACCCACGCGTGGTCGCTCTGGTAATCCGCCAATGGATGAGC
AACGAATTATGA

Upstream 100 bases:

>100_bases
TTTTGTCACACAACGCTAACCACATCGTTCATCAGCCTGGCAGGGAGCTACGCCGTGGCCCGAACCGGATCCTGAGCGTC
ATTGAAGGACACTGGCTAAA

Downstream 100 bases:

>100_bases
GTCTGACCGGAACCGAAAAAAGCGCCATCCTGCTGATGACCCTGGGTGAAGATCGCGCCGCCGAGGTGTTCAAACACCTC
TCATCGCGGGAAGTCCAGCA

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 562

Protein sequence:

>563_residues
MSASISATESRDNGLQAMWNRLRANPKIPLLIAASAAIAIVVALLLWAKSPDYRVLYSNINDRDGGAIVTQLTQMNIPFR
FAENGAALLIPADKVHETRLRLAQLGLPKGGAVGFELLDQEKFGISQFSEQINYQRALEGELSRTIESLGPVQNARVHLA
LPKPSLFVREQKSPSASVTLTLQPGRALDDGQINAIVYMVSSSVAGLPPGNVTVVDQSGRLLTQSDGAGRDLNAAQLKYA
NEVESRYQRRIEAILAPMVGNGNARAQVTAQIDFATREQTDEEYQPNQLPNKAAVRSKQMSQSDQIGGPLVGGVPGALSN
QPSAPATAPIETAKPAATGNNANATQPNAAATRSAASGPQNSRLDETTNYEVDRTIRHTQQKAGTVQRLSVAVVVNYRGT
DKDGKPLPMSKEQLAQIESLVRESMGFSSTRGDTLNVVNTPFTDNEVTGGELPFWQSQAFIDRLFDAGRYLLVLLVGWLL
WRKLVRPQLQNRQAVQKAAIAAANTPMAKPAESNKQSNEELAQHRKSQQRVSAEVQSQRIRDLADKDPRVVALVIRQWMS
NEL

Sequences:

>Translated_563_residues
MSASISATESRDNGLQAMWNRLRANPKIPLLIAASAAIAIVVALLLWAKSPDYRVLYSNINDRDGGAIVTQLTQMNIPFR
FAENGAALLIPADKVHETRLRLAQLGLPKGGAVGFELLDQEKFGISQFSEQINYQRALEGELSRTIESLGPVQNARVHLA
LPKPSLFVREQKSPSASVTLTLQPGRALDDGQINAIVYMVSSSVAGLPPGNVTVVDQSGRLLTQSDGAGRDLNAAQLKYA
NEVESRYQRRIEAILAPMVGNGNARAQVTAQIDFATREQTDEEYQPNQLPNKAAVRSKQMSQSDQIGGPLVGGVPGALSN
QPSAPATAPIETAKPAATGNNANATQPNAAATRSAASGPQNSRLDETTNYEVDRTIRHTQQKAGTVQRLSVAVVVNYRGT
DKDGKPLPMSKEQLAQIESLVRESMGFSSTRGDTLNVVNTPFTDNEVTGGELPFWQSQAFIDRLFDAGRYLLVLLVGWLL
WRKLVRPQLQNRQAVQKAAIAAANTPMAKPAESNKQSNEELAQHRKSQQRVSAEVQSQRIRDLADKDPRVVALVIRQWMS
NEL
>Mature_562_residues
SASISATESRDNGLQAMWNRLRANPKIPLLIAASAAIAIVVALLLWAKSPDYRVLYSNINDRDGGAIVTQLTQMNIPFRF
AENGAALLIPADKVHETRLRLAQLGLPKGGAVGFELLDQEKFGISQFSEQINYQRALEGELSRTIESLGPVQNARVHLAL
PKPSLFVREQKSPSASVTLTLQPGRALDDGQINAIVYMVSSSVAGLPPGNVTVVDQSGRLLTQSDGAGRDLNAAQLKYAN
EVESRYQRRIEAILAPMVGNGNARAQVTAQIDFATREQTDEEYQPNQLPNKAAVRSKQMSQSDQIGGPLVGGVPGALSNQ
PSAPATAPIETAKPAATGNNANATQPNAAATRSAASGPQNSRLDETTNYEVDRTIRHTQQKAGTVQRLSVAVVVNYRGTD
KDGKPLPMSKEQLAQIESLVRESMGFSSTRGDTLNVVNTPFTDNEVTGGELPFWQSQAFIDRLFDAGRYLLVLLVGWLLW
RKLVRPQLQNRQAVQKAAIAAANTPMAKPAESNKQSNEELAQHRKSQQRVSAEVQSQRIRDLADKDPRVVALVIRQWMSN
EL

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=560, Percent_Identity=65.5357142857143, Blast_Score=706, Evalue=0.0,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 61188; Mature: 61057

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS00014 ER_TARGET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASISATESRDNGLQAMWNRLRANPKIPLLIAASAAIAIVVALLLWAKSPDYRVLYSNI
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEECCC
NDRDGGAIVTQLTQMNIPFRFAENGAALLIPADKVHETRLRLAQLGLPKGGAVGFELLDQ
CCCCCCHHEEHHHHCCCCEEECCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCHHHHCC
EKFGISQFSEQINYQRALEGELSRTIESLGPVQNARVHLALPKPSLFVREQKSPSASVTL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCEEEE
TLQPGRALDDGQINAIVYMVSSSVAGLPPGNVTVVDQSGRLLTQSDGAGRDLNAAQLKYA
EECCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHH
NEVESRYQRRIEAILAPMVGNGNARAQVTAQIDFATREQTDEEYQPNQLPNKAAVRSKQM
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHH
SQSDQIGGPLVGGVPGALSNQPSAPATAPIETAKPAATGNNANATQPNAAATRSAASGPQ
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
NSRLDETTNYEVDRTIRHTQQKAGTVQRLSVAVVVNYRGTDKDGKPLPMSKEQLAQIESL
CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHH
VRESMGFSSTRGDTLNVVNTPFTDNEVTGGELPFWQSQAFIDRLFDAGRYLLVLLVGWLL
HHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WRKLVRPQLQNRQAVQKAAIAAANTPMAKPAESNKQSNEELAQHRKSQQRVSAEVQSQRI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RDLADKDPRVVALVIRQWMSNEL
HHHHCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SASISATESRDNGLQAMWNRLRANPKIPLLIAASAAIAIVVALLLWAKSPDYRVLYSNI
CCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEECCC
NDRDGGAIVTQLTQMNIPFRFAENGAALLIPADKVHETRLRLAQLGLPKGGAVGFELLDQ
CCCCCCHHEEHHHHCCCCEEECCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCHHHHCC
EKFGISQFSEQINYQRALEGELSRTIESLGPVQNARVHLALPKPSLFVREQKSPSASVTL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCEEEE
TLQPGRALDDGQINAIVYMVSSSVAGLPPGNVTVVDQSGRLLTQSDGAGRDLNAAQLKYA
EECCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHH
NEVESRYQRRIEAILAPMVGNGNARAQVTAQIDFATREQTDEEYQPNQLPNKAAVRSKQM
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHH
SQSDQIGGPLVGGVPGALSNQPSAPATAPIETAKPAATGNNANATQPNAAATRSAASGPQ
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
NSRLDETTNYEVDRTIRHTQQKAGTVQRLSVAVVVNYRGTDKDGKPLPMSKEQLAQIESL
CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHH
VRESMGFSSTRGDTLNVVNTPFTDNEVTGGELPFWQSQAFIDRLFDAGRYLLVLLVGWLL
HHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WRKLVRPQLQNRQAVQKAAIAAANTPMAKPAESNKQSNEELAQHRKSQQRVSAEVQSQRI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RDLADKDPRVVALVIRQWMSNEL
HHHHCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2544561; 11677609; 1551848 [H]