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The map label for this gene is ddpA [H]

Identifier: 157371156

GI number: 157371156

Start: 3209114

End: 3210682

Strand: Reverse

Name: ddpA [H]

Synonym: Spro_2916

Alternate gene names: 157371156

Gene position: 3210682-3209114 (Counterclockwise)

Preceding gene: 157371157

Following gene: 157371155

Centisome position: 58.92

GC content: 57.49

Gene sequence:

>1569_bases
ATGAAAGCGTTCGTCCCTTCTTTGGTGTTTTTGGCCGTGGCGGCCAGTTTCAGCACGCAGGCAGCAACTCCGGCGAATAC
GTTGGTCATTGCCCAGTCAATCGATGACGTAGTCAGTTTTGACCCGGCTCAGGGTTTTGAATTAACCACGGTGCAGTCGT
TTAACAGCCTGTATCAGCGGCTGATCCAGTCCGATCCAAAAAATCCGATTGAGCTTAAACCGACGCTGGCCAGCGAATGG
CAGGCGGGCAGCGATAACCGCAGCCTGACTTTTACCCTGCGACCGGACGCCAAATTTGCCAGCGGCAACCCGCTGCGCCC
GGAGGATGTGATCTTCTCGCTATCGCGGGTGGTGAAGCTGAATCTGGAGCCGTCGTTTATCCTCACCCAACTGGGCTGGA
ACGCTAAAAATGTCGACCAGTACCTGACCAAGGTCGATGACCATCGGGTAAAAATCAGCTGGAGCGAAAACGTCAGCCCG
GCGTTTGTGCTTAGCCTGCTTTCGGCACCGGTGTCTTCCATTGTCGATGCCAAAGAAGCGTTGGCGCATCAGCAGGGGAA
TGACTTTGGCCATCAGTGGCTGAACAGCCATTCTGCCGGTAGCGGCCCGTATAAAATTCGCACCTATGTGCCGCATGAAG
TAGTGGTGCTTGACGCCAACCCAGGCTCGCCAGAGGGCGCACCCACGCTGAAAACCATCCTGATCAAGAACGTGCCGGAT
CCGGCCGCCCGCCGCTTGTTGATCGAGCAGGGGGACGCCGATATTGCGCGAAACCTTGGTGCCGACCAGATGGCAGCGCT
GAAAGGCAAGCCGGGCGTCAAACCGCTGGCGATCCCGTATGCCTCACTCTATTTCCTGCAGTTCAACGCCAAGGCGTCAC
CGGCACTGGGTAACCCGGCATTCTGGGAGGCGGCGCGCTGGCTGTTCGACTATAAAGGCATTGCCGACGATCTGCTGAAA
GGGCAGTTCCAGACCCACCAGGCGTTCCTGCCGGAGGGTTACCTGGGGGCGTTGAAGGATAAGCCTTACAGTTTTAATCC
GACCAAGGCCAAGGAGATTCTGGCCAAGGCCGGTTTGAAAGACATCAGCTTTAAGCTGGAGGTCAACAACCAGCCGCCGT
ATCTGGATATCGCACAGGCATTACAGGCCAGTTTCGCGCAGGGCGGGGTGAAGGTGAGTCTGGTGCCGGGCCTCAGTGCG
CAGGTCTCCACCAAGGTCAAATCCCTCAACTACGACGCGACCCTGACCTCCTGGGGGCCGGATTATTTTGATCCAAATAC
CAACGCCGCCGCTTTCGCCTATAACCCGGAAGACGGCAGCAAAACGCTGGCCTGGCGTGCCAACTGGCAGATCCCTGCAT
TGAACAAGCTGACGCTGGCGGCCACGGCGGAAAATGACACCGCCAAACGGGTGGCGGATTACCAACAGTTGCAGCAAGCC
GTTCAGCAAAGCTCGCCGTTTGTGATCGGCCTGCAGGCACGCAGCCTGATTGCGGTGCGCGACAACCTGAAAGGCTATGA
GCAGGGCATCAACCCTGACATGGTGTTCTACAGTAAGGTCAGCAAGTAA

Upstream 100 bases:

>100_bases
TAAAAAGAATATCTATAGTTATTTAAGTACCTTCGCCTGCCGATGGCTCTCACATACACTCGCGAAATTACTATAAATTC
CATCCGCTTGGAGAGTTTTG

Downstream 100 bases:

>100_bases
TGATCAGCCGTTCCTCTTCGGCCGGGTTCGCCCGGCACAGTTGGCGCTGGGGCCGCAGGCTGCTTACCGGCTTACTGTCG
CTGGCGCTGACGCTGCTTGG

Product: 4-phytase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MKAFVPSLVFLAVAASFSTQAATPANTLVIAQSIDDVVSFDPAQGFELTTVQSFNSLYQRLIQSDPKNPIELKPTLASEW
QAGSDNRSLTFTLRPDAKFASGNPLRPEDVIFSLSRVVKLNLEPSFILTQLGWNAKNVDQYLTKVDDHRVKISWSENVSP
AFVLSLLSAPVSSIVDAKEALAHQQGNDFGHQWLNSHSAGSGPYKIRTYVPHEVVVLDANPGSPEGAPTLKTILIKNVPD
PAARRLLIEQGDADIARNLGADQMAALKGKPGVKPLAIPYASLYFLQFNAKASPALGNPAFWEAARWLFDYKGIADDLLK
GQFQTHQAFLPEGYLGALKDKPYSFNPTKAKEILAKAGLKDISFKLEVNNQPPYLDIAQALQASFAQGGVKVSLVPGLSA
QVSTKVKSLNYDATLTSWGPDYFDPNTNAAAFAYNPEDGSKTLAWRANWQIPALNKLTLAATAENDTAKRVADYQQLQQA
VQQSSPFVIGLQARSLIAVRDNLKGYEQGINPDMVFYSKVSK

Sequences:

>Translated_522_residues
MKAFVPSLVFLAVAASFSTQAATPANTLVIAQSIDDVVSFDPAQGFELTTVQSFNSLYQRLIQSDPKNPIELKPTLASEW
QAGSDNRSLTFTLRPDAKFASGNPLRPEDVIFSLSRVVKLNLEPSFILTQLGWNAKNVDQYLTKVDDHRVKISWSENVSP
AFVLSLLSAPVSSIVDAKEALAHQQGNDFGHQWLNSHSAGSGPYKIRTYVPHEVVVLDANPGSPEGAPTLKTILIKNVPD
PAARRLLIEQGDADIARNLGADQMAALKGKPGVKPLAIPYASLYFLQFNAKASPALGNPAFWEAARWLFDYKGIADDLLK
GQFQTHQAFLPEGYLGALKDKPYSFNPTKAKEILAKAGLKDISFKLEVNNQPPYLDIAQALQASFAQGGVKVSLVPGLSA
QVSTKVKSLNYDATLTSWGPDYFDPNTNAAAFAYNPEDGSKTLAWRANWQIPALNKLTLAATAENDTAKRVADYQQLQQA
VQQSSPFVIGLQARSLIAVRDNLKGYEQGINPDMVFYSKVSK
>Mature_522_residues
MKAFVPSLVFLAVAASFSTQAATPANTLVIAQSIDDVVSFDPAQGFELTTVQSFNSLYQRLIQSDPKNPIELKPTLASEW
QAGSDNRSLTFTLRPDAKFASGNPLRPEDVIFSLSRVVKLNLEPSFILTQLGWNAKNVDQYLTKVDDHRVKISWSENVSP
AFVLSLLSAPVSSIVDAKEALAHQQGNDFGHQWLNSHSAGSGPYKIRTYVPHEVVVLDANPGSPEGAPTLKTILIKNVPD
PAARRLLIEQGDADIARNLGADQMAALKGKPGVKPLAIPYASLYFLQFNAKASPALGNPAFWEAARWLFDYKGIADDLLK
GQFQTHQAFLPEGYLGALKDKPYSFNPTKAKEILAKAGLKDISFKLEVNNQPPYLDIAQALQASFAQGGVKVSLVPGLSA
QVSTKVKSLNYDATLTSWGPDYFDPNTNAAAFAYNPEDGSKTLAWRANWQIPALNKLTLAATAENDTAKRVADYQQLQQA
VQQSSPFVIGLQARSLIAVRDNLKGYEQGINPDMVFYSKVSK

Specific function: Part of the ABC transporter complex ddpABCDF, which is probably involved in D,D-dipeptide transport [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787762, Length=514, Percent_Identity=29.9610894941634, Blast_Score=189, Evalue=4e-49,
Organism=Escherichia coli, GI1787551, Length=491, Percent_Identity=24.4399185336049, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1789966, Length=524, Percent_Identity=24.0458015267176, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI87081878, Length=558, Percent_Identity=25.089605734767, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1787052, Length=516, Percent_Identity=23.2558139534884, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI1787495, Length=511, Percent_Identity=22.7005870841487, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 56881; Mature: 56881

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFVPSLVFLAVAASFSTQAATPANTLVIAQSIDDVVSFDPAQGFELTTVQSFNSLYQR
CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHCCCCCCCEEEEHHHHHHHHHHH
LIQSDPKNPIELKPTLASEWQAGSDNRSLTFTLRPDAKFASGNPLRPEDVIFSLSRVVKL
HHHCCCCCCCEECCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHEEE
NLEPSFILTQLGWNAKNVDQYLTKVDDHRVKISWSENVSPAFVLSLLSAPVSSIVDAKEA
CCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LAHQQGNDFGHQWLNSHSAGSGPYKIRTYVPHEVVVLDANPGSPEGAPTLKTILIKNVPD
HHHHCCCHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCC
PAARRLLIEQGDADIARNLGADQMAALKGKPGVKPLAIPYASLYFLQFNAKASPALGNPA
HHHHHHHHCCCCHHHHHCCCHHHHHHHCCCCCCCEEEECCEEEEEEEECCCCCCCCCCCH
FWEAARWLFDYKGIADDLLKGQFQTHQAFLPEGYLGALKDKPYSFNPTKAKEILAKAGLK
HHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCC
DISFKLEVNNQPPYLDIAQALQASFAQGGVKVSLVPGLSAQVSTKVKSLNYDATLTSWGP
EEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCC
DYFDPNTNAAAFAYNPEDGSKTLAWRANWQIPALNKLTLAATAENDTAKRVADYQQLQQA
CCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
VQQSSPFVIGLQARSLIAVRDNLKGYEQGINPDMVFYSKVSK
HHCCCCEEEEECCCEEEEEHHCCCHHHCCCCCCEEEEEECCC
>Mature Secondary Structure
MKAFVPSLVFLAVAASFSTQAATPANTLVIAQSIDDVVSFDPAQGFELTTVQSFNSLYQR
CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHCCCCCCCEEEEHHHHHHHHHHH
LIQSDPKNPIELKPTLASEWQAGSDNRSLTFTLRPDAKFASGNPLRPEDVIFSLSRVVKL
HHHCCCCCCCEECCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHEEE
NLEPSFILTQLGWNAKNVDQYLTKVDDHRVKISWSENVSPAFVLSLLSAPVSSIVDAKEA
CCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LAHQQGNDFGHQWLNSHSAGSGPYKIRTYVPHEVVVLDANPGSPEGAPTLKTILIKNVPD
HHHHCCCHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCC
PAARRLLIEQGDADIARNLGADQMAALKGKPGVKPLAIPYASLYFLQFNAKASPALGNPA
HHHHHHHHCCCCHHHHHCCCHHHHHHHCCCCCCCEEEECCEEEEEEEECCCCCCCCCCCH
FWEAARWLFDYKGIADDLLKGQFQTHQAFLPEGYLGALKDKPYSFNPTKAKEILAKAGLK
HHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCC
DISFKLEVNNQPPYLDIAQALQASFAQGGVKVSLVPGLSAQVSTKVKSLNYDATLTSWGP
EEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCC
DYFDPNTNAAAFAYNPEDGSKTLAWRANWQIPALNKLTLAATAENDTAKRVADYQQLQQA
CCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
VQQSSPFVIGLQARSLIAVRDNLKGYEQGINPDMVFYSKVSK
HHCCCCEEEEECCCEEEEEHHCCCHHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 9751644 [H]