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The map label for this gene is dppB [H]

Identifier: 157371155

GI number: 157371155

Start: 3208062

End: 3209114

Strand: Reverse

Name: dppB [H]

Synonym: Spro_2915

Alternate gene names: 157371155

Gene position: 3209114-3208062 (Counterclockwise)

Preceding gene: 157371156

Following gene: 157371154

Centisome position: 58.9

GC content: 62.3

Gene sequence:

>1053_bases
ATGATCAGCCGTTCCTCTTCGGCCGGGTTCGCCCGGCACAGTTGGCGCTGGGGCCGCAGGCTGCTTACCGGCTTACTGTC
GCTGGCGCTGACGCTGCTTGGCCTGCTGCTGTTCACCTTTATGCTCTCGCACCTGGCGCCGATCGATCCTACGTTGCAAA
TTGCCGGCGATCACGCCAGCGAAGCGACCTATGCTCAGGTGCGCCATGATTTGGGGCTGGATCAGCCGTTGCCGGTGCAG
TTCTGGCGTTACCTGGTGCATCTGGCGCACGGGGACATGGGCATCTCGCGCATTACTTCGCAGCCGGTGCTGAGCGATTT
GCTTCGTACCTTCCCGGCAACGGTGGAACTGGCGACCTGCGCGATCATCCTCGGCGCCGTCGGCGGCATTACGCTGGCGT
TTCTGGCGGTGATCAAACCGGGCGGCTGGCTGGACAACGTGGCGCGCCTGCTGTCGCTGATCGGCTATTCGGTGCCGATC
TTCTGGCTTAGCCTGCTGGGGCTGCTGCTGTTTTACGCCACATTGCATTGGTCGGCGGGGCCGGGGCGGCTGGACGATAT
CTATCTGTACAGCATGGAGCCGCGCAGCGGATTTATCCTGGTTGACAGTTGGCTGTCCGGCGATCGCGAAATGTTCTACA
ACGCCATCAGCCACCTGTGGCTGCCGGTGGTGGCGCTGGCGCTGCTGTCGATGGCGGGCATCACCCGTTTACTGCGCGCC
GCGATGCTGGAAGAGTGCAATAAAGAGTACGTTACCCTGGCGCGTTCCAAAGGGGCCAGCCGCGCGCGCATTCTGGTGCG
TCACGTATTCCCCAACGTGTTGGGCACGTTGATCACCGTACTGTCGCTGTCCTACGCCAGCCTGCTGGAGGGCGCGGTAT
TGACCGAAACGGTATTTGCCTGGCCCGGTGTAGGGCGTTATCTGACCACCGCGCTGTTTGCCGCCGATACGCCAGCCATC
CTGGGGGCCACCTTGCTGATTGGCACCTGTTTTGTGGTGCTTAATGCGCTGGCCGACGCGCTGACCTATTTAGTGGACCC
GCGAACCCGATGA

Upstream 100 bases:

>100_bases
GCCTGCAGGCACGCAGCCTGATTGCGGTGCGCGACAACCTGAAAGGCTATGAGCAGGGCATCAACCCTGACATGGTGTTC
TACAGTAAGGTCAGCAAGTA

Downstream 100 bases:

>100_bases
GCCAATATCTTTCTGAACATGAACCCCAGGGCGCACCGGCCGCCGCTTACCGCCCACGCGGCCGACTGACCACGCTAACG
ATTGGCGCAACGCTGGTGGC

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MISRSSSAGFARHSWRWGRRLLTGLLSLALTLLGLLLFTFMLSHLAPIDPTLQIAGDHASEATYAQVRHDLGLDQPLPVQ
FWRYLVHLAHGDMGISRITSQPVLSDLLRTFPATVELATCAIILGAVGGITLAFLAVIKPGGWLDNVARLLSLIGYSVPI
FWLSLLGLLLFYATLHWSAGPGRLDDIYLYSMEPRSGFILVDSWLSGDREMFYNAISHLWLPVVALALLSMAGITRLLRA
AMLEECNKEYVTLARSKGASRARILVRHVFPNVLGTLITVLSLSYASLLEGAVLTETVFAWPGVGRYLTTALFAADTPAI
LGATLLIGTCFVVLNALADALTYLVDPRTR

Sequences:

>Translated_350_residues
MISRSSSAGFARHSWRWGRRLLTGLLSLALTLLGLLLFTFMLSHLAPIDPTLQIAGDHASEATYAQVRHDLGLDQPLPVQ
FWRYLVHLAHGDMGISRITSQPVLSDLLRTFPATVELATCAIILGAVGGITLAFLAVIKPGGWLDNVARLLSLIGYSVPI
FWLSLLGLLLFYATLHWSAGPGRLDDIYLYSMEPRSGFILVDSWLSGDREMFYNAISHLWLPVVALALLSMAGITRLLRA
AMLEECNKEYVTLARSKGASRARILVRHVFPNVLGTLITVLSLSYASLLEGAVLTETVFAWPGVGRYLTTALFAADTPAI
LGATLLIGTCFVVLNALADALTYLVDPRTR
>Mature_350_residues
MISRSSSAGFARHSWRWGRRLLTGLLSLALTLLGLLLFTFMLSHLAPIDPTLQIAGDHASEATYAQVRHDLGLDQPLPVQ
FWRYLVHLAHGDMGISRITSQPVLSDLLRTFPATVELATCAIILGAVGGITLAFLAVIKPGGWLDNVARLLSLIGYSVPI
FWLSLLGLLLFYATLHWSAGPGRLDDIYLYSMEPRSGFILVDSWLSGDREMFYNAISHLWLPVVALALLSMAGITRLLRA
AMLEECNKEYVTLARSKGASRARILVRHVFPNVLGTLITVLSLSYASLLEGAVLTETVFAWPGVGRYLTTALFAADTPAI
LGATLLIGTCFVVLNALADALTYLVDPRTR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=324, Percent_Identity=38.2716049382716, Blast_Score=237, Evalue=8e-64,
Organism=Escherichia coli, GI1787761, Length=322, Percent_Identity=43.4782608695652, Blast_Score=233, Evalue=2e-62,
Organism=Escherichia coli, GI1787550, Length=263, Percent_Identity=37.6425855513308, Blast_Score=181, Evalue=4e-47,
Organism=Escherichia coli, GI1789888, Length=335, Percent_Identity=32.5373134328358, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI1787053, Length=330, Percent_Identity=28.4848484848485, Blast_Score=150, Evalue=8e-38,
Organism=Escherichia coli, GI1787497, Length=322, Percent_Identity=26.7080745341615, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1788504, Length=289, Percent_Identity=26.9896193771626, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38217; Mature: 38217

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRSSSAGFARHSWRWGRRLLTGLLSLALTLLGLLLFTFMLSHLAPIDPTLQIAGDHAS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCC
EATYAQVRHDLGLDQPLPVQFWRYLVHLAHGDMGISRITSQPVLSDLLRTFPATVELATC
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCHHHHHHHH
AIILGAVGGITLAFLAVIKPGGWLDNVARLLSLIGYSVPIFWLSLLGLLLFYATLHWSAG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PGRLDDIYLYSMEPRSGFILVDSWLSGDREMFYNAISHLWLPVVALALLSMAGITRLLRA
CCCCCCEEEEEECCCCCEEEEECHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLEECNKEYVTLARSKGASRARILVRHVFPNVLGTLITVLSLSYASLLEGAVLTETVFA
HHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
WPGVGRYLTTALFAADTPAILGATLLIGTCFVVLNALADALTYLVDPRTR
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MISRSSSAGFARHSWRWGRRLLTGLLSLALTLLGLLLFTFMLSHLAPIDPTLQIAGDHAS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCC
EATYAQVRHDLGLDQPLPVQFWRYLVHLAHGDMGISRITSQPVLSDLLRTFPATVELATC
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCHHHHHHHH
AIILGAVGGITLAFLAVIKPGGWLDNVARLLSLIGYSVPIFWLSLLGLLLFYATLHWSAG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PGRLDDIYLYSMEPRSGFILVDSWLSGDREMFYNAISHLWLPVVALALLSMAGITRLLRA
CCCCCCEEEEEECCCCCEEEEECHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLEECNKEYVTLARSKGASRARILVRHVFPNVLGTLITVLSLSYASLLEGAVLTETVFA
HHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
WPGVGRYLTTALFAADTPAILGATLLIGTCFVVLNALADALTYLVDPRTR
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]