Click here to switch to the map view.

The map label for this gene is des6 [H]

Identifier: 157371103

GI number: 157371103

Start: 3142872

End: 3143954

Strand: Reverse

Name: des6 [H]

Synonym: Spro_2863

Alternate gene names: 157371103

Gene position: 3143954-3142872 (Counterclockwise)

Preceding gene: 157371104

Following gene: 157371102

Centisome position: 57.7

GC content: 57.34

Gene sequence:

>1083_bases
ATGGCTGACACACTGGCACCACTGAAGTTTCCCGCCGACGGTGAGCAGGCGTTTCATCGTGATCTTAAAAGGGCGGCTCA
TGCCTATCTGGCCGGTGACCATCGCTATGCCGACGGTTGGCGGCTGGCAAAGGCGGCGCTGTTGTTGGCGCTGTGCGTGG
GTTTTTATGCGCTGAGTCTGATGCAGCAGCAGGTTTGGGCATTTTTGGCCTGCTATTTTTTGTTCGTGATGATGGGCATG
TTACTCAACGTGAATGTGAATCACGATGCTTCGCATAATGCTTTTCTACGCGCCCCCTGGGCCAACCGACTGGCGGGGCG
GCTGGTGACGCTGCCGCTGGGAGTAGACCCGGATTATTGGCGGGTGCGGCATGTGGAATATCACCACGTTTATGCCAACG
TCGAGCACTACGATCTGGATACCGAAGAGAATGGTTTTTTCCGCCAGACGCCGTTCCAGCGCTGGCGCAAACATATGCGT
TATCAGCACCTGTACTGGCCGTTGATTGCCGCACTCTCCTTGCCCTATATCGCCTGGATATTTGACTGGTCGGATCGCCT
GGGGAAAACCCCGCTGCATGAAAAGAACATTTTACCGGGCCGCAGCGGCTGGGCGGTGTTTATCCTGTGCAAGATTGGCC
ATCTGTTGTTGGTGCTGGCAATCCCCCTGGTGCTGTGCCAGCAGAACGGTATCGGCTGGCCGTGGGTGCTGCTGGCCTAT
GCGCTCAGCCAGATGTGCGCCTCGTTGTTGGTGGTGTTTCTATTGTTGGGAACCCATTGGGCGCAGGCCGAATTTTACCC
GGTGCCGGAGGGCGAAAGCATGCCACATGGCTGGTATCGCCATAATTTCGCGACCGCCTGTGACTGGCAGACTTCGCCGC
GTGGGTTGCAACACCTGACCGGCGGGCTGAATTATCATCTGACCCACCATCTGTTTCCCGGCTGGAATCATCGCCATTAT
CCGGCGCTGGCCGCCATAGTGGCGCAGTTGGCGACGCAACACGGTATGGAATACCGCTGCATTGGTTACCGCGAACTGCT
GGCGCAGCAACAGCATTTCTTACGTCGGATGGGGCAGCCATGA

Upstream 100 bases:

>100_bases
CGTTATTGGCATCTCGCGATGGCCTTGATCACATTGCACGGGGTTTGCGTGGCGCTAGGCTGGGGCCGCGTGCGCGCTCT
TAAGCCGGTGGAGGAAACCC

Downstream 100 bases:

>100_bases
AGCCGTTACGGCCGTTGGCCTTCAAGCCGGATGACACCGGGCTGCATCGTGCGCTGATGCAGGTCGCGCAGGGTTATCTG
GCCGACAATCGCGACCATCG

Product: fatty acid desaturase

Products: NA

Alternate protein names: Delta(6)-desaturase [H]

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MADTLAPLKFPADGEQAFHRDLKRAAHAYLAGDHRYADGWRLAKAALLLALCVGFYALSLMQQQVWAFLACYFLFVMMGM
LLNVNVNHDASHNAFLRAPWANRLAGRLVTLPLGVDPDYWRVRHVEYHHVYANVEHYDLDTEENGFFRQTPFQRWRKHMR
YQHLYWPLIAALSLPYIAWIFDWSDRLGKTPLHEKNILPGRSGWAVFILCKIGHLLLVLAIPLVLCQQNGIGWPWVLLAY
ALSQMCASLLVVFLLLGTHWAQAEFYPVPEGESMPHGWYRHNFATACDWQTSPRGLQHLTGGLNYHLTHHLFPGWNHRHY
PALAAIVAQLATQHGMEYRCIGYRELLAQQQHFLRRMGQP

Sequences:

>Translated_360_residues
MADTLAPLKFPADGEQAFHRDLKRAAHAYLAGDHRYADGWRLAKAALLLALCVGFYALSLMQQQVWAFLACYFLFVMMGM
LLNVNVNHDASHNAFLRAPWANRLAGRLVTLPLGVDPDYWRVRHVEYHHVYANVEHYDLDTEENGFFRQTPFQRWRKHMR
YQHLYWPLIAALSLPYIAWIFDWSDRLGKTPLHEKNILPGRSGWAVFILCKIGHLLLVLAIPLVLCQQNGIGWPWVLLAY
ALSQMCASLLVVFLLLGTHWAQAEFYPVPEGESMPHGWYRHNFATACDWQTSPRGLQHLTGGLNYHLTHHLFPGWNHRHY
PALAAIVAQLATQHGMEYRCIGYRELLAQQQHFLRRMGQP
>Mature_359_residues
ADTLAPLKFPADGEQAFHRDLKRAAHAYLAGDHRYADGWRLAKAALLLALCVGFYALSLMQQQVWAFLACYFLFVMMGML
LNVNVNHDASHNAFLRAPWANRLAGRLVTLPLGVDPDYWRVRHVEYHHVYANVEHYDLDTEENGFFRQTPFQRWRKHMRY
QHLYWPLIAALSLPYIAWIFDWSDRLGKTPLHEKNILPGRSGWAVFILCKIGHLLLVLAIPLVLCQQNGIGWPWVLLAYA
LSQMCASLLVVFLLLGTHWAQAEFYPVPEGESMPHGWYRHNFATACDWQTSPRGLQHLTGGLNYHLTHHLFPGWNHRHYP
ALAAIVAQLATQHGMEYRCIGYRELLAQQQHFLRRMGQP

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: =1.14.19.3 [H]

Molecular weight: Translated: 41596; Mature: 41464

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTLAPLKFPADGEQAFHRDLKRAAHAYLAGDHRYADGWRLAKAALLLALCVGFYALSL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MQQQVWAFLACYFLFVMMGMLLNVNVNHDASHNAFLRAPWANRLAGRLVTLPLGVDPDYW
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHCCCEEEEECCCCCCCC
RVRHVEYHHVYANVEHYDLDTEENGFFRQTPFQRWRKHMRYQHLYWPLIAALSLPYIAWI
EEEEEEEEEEEECCEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
FDWSDRLGKTPLHEKNILPGRSGWAVFILCKIGHLLLVLAIPLVLCQQNGIGWPWVLLAY
EECHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ALSQMCASLLVVFLLLGTHWAQAEFYPVPEGESMPHGWYRHNFATACDWQTSPRGLQHLT
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHH
GGLNYHLTHHLFPGWNHRHYPALAAIVAQLATQHGMEYRCIGYRELLAQQQHFLRRMGQP
CCCCEEEHEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ADTLAPLKFPADGEQAFHRDLKRAAHAYLAGDHRYADGWRLAKAALLLALCVGFYALSL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MQQQVWAFLACYFLFVMMGMLLNVNVNHDASHNAFLRAPWANRLAGRLVTLPLGVDPDYW
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHCCCEEEEECCCCCCCC
RVRHVEYHHVYANVEHYDLDTEENGFFRQTPFQRWRKHMRYQHLYWPLIAALSLPYIAWI
EEEEEEEEEEEECCEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
FDWSDRLGKTPLHEKNILPGRSGWAVFILCKIGHLLLVLAIPLVLCQQNGIGWPWVLLAY
EECHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ALSQMCASLLVVFLLLGTHWAQAEFYPVPEGESMPHGWYRHNFATACDWQTSPRGLQHLT
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHH
GGLNYHLTHHLFPGWNHRHYPALAAIVAQLATQHGMEYRCIGYRELLAQQQHFLRRMGQP
CCCCEEEHEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8389613; 8905231 [H]