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The map label for this gene is des6 [H]

Identifier: 157371102

GI number: 157371102

Start: 3141790

End: 3142875

Strand: Reverse

Name: des6 [H]

Synonym: Spro_2862

Alternate gene names: 157371102

Gene position: 3142875-3141790 (Counterclockwise)

Preceding gene: 157371103

Following gene: 157371098

Centisome position: 57.68

GC content: 60.22

Gene sequence:

>1086_bases
ATGAAGCCGTTACGGCCGTTGGCCTTCAAGCCGGATGACACCGGGCTGCATCGTGCGCTGATGCAGGTCGCGCAGGGTTA
TCTGGCCGACAATCGCGACCATCGTTTTGCCGACGGCGGTATGCTGGCGAAGGTGCTTTTCCTGCTGGCGCTATGCGCGC
TTTGTTATGGGTTGAGCCTGCAGCAGCAGAGCCTCTGGGGCTTTTTTGCCTGCTACTTCGGGTTCATTTTCATCGGCATG
TTCCTCACGGTCAACGTGGTGCACGACGCGTCGCACAACGCATTTTTCAGGCAGCCCTGGGCCAACCGCTGGCTGAATTG
TCTGGTGAGTATCCCGCTCGGGTTGGATCCCGATTGCTGGCGGGTGCGGCACGTTATTTTTCACCACGCCCACAACAACA
TCGAGCATTACGATCCCGATATCGACGCCAATGGCGTGCTGCGGCAGACGCCGTTCCAGCGTTGGCGGCCCTTTATGCGA
GCGCAGCGCTTTTACTGGCCGCTGGTGGCGGCGATGACCTTTCCGTATTACATCTGGCTGTTTGACTGGCTGGACCGGGC
AGGGCGAACCCGGGTCAGGGCGCGGATGGCGCAACAGGGCCTACGTGGTTGGAGTATTTTTCTGGCGGGCAAAGCGGCGC
ACTTGCTGTTGGCGTTGGCGATCCCGTGTTATCTGCTGCCGCCGGCAATCGGTGTCGGGCAGATCCTGCTGGTTTATCTG
CTAAGCCAGATGTTGTCGTCACTGCTGTTCGTAATGTTGATTATCGGCACCCACTGGGCCAAGGCGCAATTTTATCAGGC
ACCGGCGCAGGGGCCGTTAGCGCACGGCTGGTACCACCATGTGTTTGCCACCACCTTTGACTGGTTCCCGCGGCCGCGCT
GGCTGGGCTATTGGTTGGGCGGGGCAAATCTGCACCTGACCCACCACCTGTTCCCGCACTGGAGCCACCGCCATTACCCG
GCATTAAGCCGTATCATTGCCGAGGTGGCACCGCGCTTTGGCATCGACTATCGGGTATTGGAACTGGGGGAGTTGCTGCG
GCTGCAGCAGCGCTTTCTCAGCGCGATGGGGCGCAAACCGGTTTAG

Upstream 100 bases:

>100_bases
TGGCGCAGTTGGCGACGCAACACGGTATGGAATACCGCTGCATTGGTTACCGCGAACTGCTGGCGCAGCAACAGCATTTC
TTACGTCGGATGGGGCAGCC

Downstream 100 bases:

>100_bases
TTATTAGCGTGGGCATTTTACTGCCCACGCTTGCCAGACAGCGCCTGGATTAATGCGATCTCATGCCCGCTGCATTCATC
AACAGGCGGAACAGCGAAGC

Product: fatty acid desaturase

Products: NA

Alternate protein names: Delta(6)-desaturase [H]

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKPLRPLAFKPDDTGLHRALMQVAQGYLADNRDHRFADGGMLAKVLFLLALCALCYGLSLQQQSLWGFFACYFGFIFIGM
FLTVNVVHDASHNAFFRQPWANRWLNCLVSIPLGLDPDCWRVRHVIFHHAHNNIEHYDPDIDANGVLRQTPFQRWRPFMR
AQRFYWPLVAAMTFPYYIWLFDWLDRAGRTRVRARMAQQGLRGWSIFLAGKAAHLLLALAIPCYLLPPAIGVGQILLVYL
LSQMLSSLLFVMLIIGTHWAKAQFYQAPAQGPLAHGWYHHVFATTFDWFPRPRWLGYWLGGANLHLTHHLFPHWSHRHYP
ALSRIIAEVAPRFGIDYRVLELGELLRLQQRFLSAMGRKPV

Sequences:

>Translated_361_residues
MKPLRPLAFKPDDTGLHRALMQVAQGYLADNRDHRFADGGMLAKVLFLLALCALCYGLSLQQQSLWGFFACYFGFIFIGM
FLTVNVVHDASHNAFFRQPWANRWLNCLVSIPLGLDPDCWRVRHVIFHHAHNNIEHYDPDIDANGVLRQTPFQRWRPFMR
AQRFYWPLVAAMTFPYYIWLFDWLDRAGRTRVRARMAQQGLRGWSIFLAGKAAHLLLALAIPCYLLPPAIGVGQILLVYL
LSQMLSSLLFVMLIIGTHWAKAQFYQAPAQGPLAHGWYHHVFATTFDWFPRPRWLGYWLGGANLHLTHHLFPHWSHRHYP
ALSRIIAEVAPRFGIDYRVLELGELLRLQQRFLSAMGRKPV
>Mature_361_residues
MKPLRPLAFKPDDTGLHRALMQVAQGYLADNRDHRFADGGMLAKVLFLLALCALCYGLSLQQQSLWGFFACYFGFIFIGM
FLTVNVVHDASHNAFFRQPWANRWLNCLVSIPLGLDPDCWRVRHVIFHHAHNNIEHYDPDIDANGVLRQTPFQRWRPFMR
AQRFYWPLVAAMTFPYYIWLFDWLDRAGRTRVRARMAQQGLRGWSIFLAGKAAHLLLALAIPCYLLPPAIGVGQILLVYL
LSQMLSSLLFVMLIIGTHWAKAQFYQAPAQGPLAHGWYHHVFATTFDWFPRPRWLGYWLGGANLHLTHHLFPHWSHRHYP
ALSRIIAEVAPRFGIDYRVLELGELLRLQQRFLSAMGRKPV

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: =1.14.19.3 [H]

Molecular weight: Translated: 41855; Mature: 41855

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLRPLAFKPDDTGLHRALMQVAQGYLADNRDHRFADGGMLAKVLFLLALCALCYGLSL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
QQQSLWGFFACYFGFIFIGMFLTVNVVHDASHNAFFRQPWANRWLNCLVSIPLGLDPDCW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHCCCCCCCHHH
RVRHVIFHHAHNNIEHYDPDIDANGVLRQTPFQRWRPFMRAQRFYWPLVAAMTFPYYIWL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDWLDRAGRTRVRARMAQQGLRGWSIFLAGKAAHLLLALAIPCYLLPPAIGVGQILLVYL
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LSQMLSSLLFVMLIIGTHWAKAQFYQAPAQGPLAHGWYHHVFATTFDWFPRPRWLGYWLG
HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEC
GANLHLTHHLFPHWSHRHYPALSRIIAEVAPRFGIDYRVLELGELLRLQQRFLSAMGRKP
CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
V
C
>Mature Secondary Structure
MKPLRPLAFKPDDTGLHRALMQVAQGYLADNRDHRFADGGMLAKVLFLLALCALCYGLSL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
QQQSLWGFFACYFGFIFIGMFLTVNVVHDASHNAFFRQPWANRWLNCLVSIPLGLDPDCW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHCCCCCCCHHH
RVRHVIFHHAHNNIEHYDPDIDANGVLRQTPFQRWRPFMRAQRFYWPLVAAMTFPYYIWL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDWLDRAGRTRVRARMAQQGLRGWSIFLAGKAAHLLLALAIPCYLLPPAIGVGQILLVYL
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LSQMLSSLLFVMLIIGTHWAKAQFYQAPAQGPLAHGWYHHVFATTFDWFPRPRWLGYWLG
HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEC
GANLHLTHHLFPHWSHRHYPALSRIIAEVAPRFGIDYRVLELGELLRLQQRFLSAMGRKP
CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8389613; 8905231 [H]