| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is lacG [H]
Identifier: 157371087
GI number: 157371087
Start: 3125274
End: 3126107
Strand: Direct
Name: lacG [H]
Synonym: Spro_2847
Alternate gene names: 157371087
Gene position: 3125274-3126107 (Clockwise)
Preceding gene: 157371086
Following gene: 157371088
Centisome position: 57.36
GC content: 57.55
Gene sequence:
>834_bases ATGAACGCTAACGGCCGCCGTTTTGACACCGGCAAACTGGTGATTTACCTGCTGGTCTCACTGTTTGCTTCGCTGTCATT ATTCCCGTTCTATTGGTCGGCCTTGCTGGCGACGCAGGACACCCGCAGCATCATGGGCATGTCGCTGCGCTTTGGCAGCC ACCTGCTGGAAAACTACCAAGGGCTGGAACAGCAAGTCCCCTTCACCCATGCGCTGCTCAATACCCTGTATGTCACCGCC ATGGCGACGCTGACCAGCGTGCTGGTTTCCGCCGCTGCGGGCTACGCCTTCAGCGTTTATCAGTTCAAAGGCAAAAAGGT CCTGTTCACTACCCTGATGCTGACCATGATGGTGCCCAGCGTGGTCAACCTGGTGCCCTATTTCTTCGTGATCAAAAGCG TCGGCCTGTTGGATCAGTTCGCCGCCGTCTGGCTACCCGCCGGGGTCAACATCTTCGGCATTTTCCTGGTACGTCAGTAC GTCAGCTCCTCACTGCCCAGCGAAATCCTCGACAGTGCGCGCATGGATGGCCTGAACGAACTGCAAATCTTCCTGCGTAT CGGCCTGCCGCTAATGCGTCCGGCGCTGCTGACGGTGGCGATCGTGGTGGTGGTCGATACCTGGAACAACTTTATGCTGC CGCTGGTGGCGTTGCAGTCGCCGGACAAACAAATTCTCCAGTTGGTGTTGCGCAGCCTGAGCGGTGCCACTGCCACGCCG TGGAACCTGGTGATGACCGGCAGTTTCCTGGCGATCGTGCCGCTGTTGATCGCCTTTATCTTCTCGTCCAAACAAATGAT GGAAAGCCTCACCCGTGGGGCGGTTAAAGGGTAA
Upstream 100 bases:
>100_bases ATGGGTACCGCTTCGGCGATCTCCTGGATCCTGTTCCTGTTGATTGCCGTGGTCAGCGCCCTGGTGTTCTGGGGCTTTGG CAAGCGTGGAGGATTGAACA
Downstream 100 bases:
>100_bases CTTATGCAATCAATCGATATTTACCGCGCTAACGGCGCGAGCGAGCGTCAACAAGTGATCCTGTTTGCCGCCGCAGAAGA CCAACTGCCTGCCACATTGC
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MNANGRRFDTGKLVIYLLVSLFASLSLFPFYWSALLATQDTRSIMGMSLRFGSHLLENYQGLEQQVPFTHALLNTLYVTA MATLTSVLVSAAAGYAFSVYQFKGKKVLFTTLMLTMMVPSVVNLVPYFFVIKSVGLLDQFAAVWLPAGVNIFGIFLVRQY VSSSLPSEILDSARMDGLNELQIFLRIGLPLMRPALLTVAIVVVVDTWNNFMLPLVALQSPDKQILQLVLRSLSGATATP WNLVMTGSFLAIVPLLIAFIFSSKQMMESLTRGAVKG
Sequences:
>Translated_277_residues MNANGRRFDTGKLVIYLLVSLFASLSLFPFYWSALLATQDTRSIMGMSLRFGSHLLENYQGLEQQVPFTHALLNTLYVTA MATLTSVLVSAAAGYAFSVYQFKGKKVLFTTLMLTMMVPSVVNLVPYFFVIKSVGLLDQFAAVWLPAGVNIFGIFLVRQY VSSSLPSEILDSARMDGLNELQIFLRIGLPLMRPALLTVAIVVVVDTWNNFMLPLVALQSPDKQILQLVLRSLSGATATP WNLVMTGSFLAIVPLLIAFIFSSKQMMESLTRGAVKG >Mature_277_residues MNANGRRFDTGKLVIYLLVSLFASLSLFPFYWSALLATQDTRSIMGMSLRFGSHLLENYQGLEQQVPFTHALLNTLYVTA MATLTSVLVSAAAGYAFSVYQFKGKKVLFTTLMLTMMVPSVVNLVPYFFVIKSVGLLDQFAAVWLPAGVNIFGIFLVRQY VSSSLPSEILDSARMDGLNELQIFLRIGLPLMRPALLTVAIVVVVDTWNNFMLPLVALQSPDKQILQLVLRSLSGATATP WNLVMTGSFLAIVPLLIAFIFSSKQMMESLTRGAVKG
Specific function: Part of the binding-protein-dependent transport system for lactose. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789860, Length=260, Percent_Identity=27.6923076923077, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI1787571, Length=287, Percent_Identity=27.1777003484321, Blast_Score=91, Evalue=7e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30536; Mature: 30536
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNANGRRFDTGKLVIYLLVSLFASLSLFPFYWSALLATQDTRSIMGMSLRFGSHLLENYQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLEQQVPFTHALLNTLYVTAMATLTSVLVSAAAGYAFSVYQFKGKKVLFTTLMLTMMVPS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCHHHHHHHHHHHHHHH VVNLVPYFFVIKSVGLLDQFAAVWLPAGVNIFGIFLVRQYVSSSLPSEILDSARMDGLNE HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHH LQIFLRIGLPLMRPALLTVAIVVVVDTWNNFMLPLVALQSPDKQILQLVLRSLSGATATP HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC WNLVMTGSFLAIVPLLIAFIFSSKQMMESLTRGAVKG CHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC >Mature Secondary Structure MNANGRRFDTGKLVIYLLVSLFASLSLFPFYWSALLATQDTRSIMGMSLRFGSHLLENYQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLEQQVPFTHALLNTLYVTAMATLTSVLVSAAAGYAFSVYQFKGKKVLFTTLMLTMMVPS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCHHHHHHHHHHHHHHH VVNLVPYFFVIKSVGLLDQFAAVWLPAGVNIFGIFLVRQYVSSSLPSEILDSARMDGLNE HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHH LQIFLRIGLPLMRPALLTVAIVVVVDTWNNFMLPLVALQSPDKQILQLVLRSLSGATATP HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC WNLVMTGSFLAIVPLLIAFIFSSKQMMESLTRGAVKG CHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1630315 [H]