| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is pepA [H]
Identifier: 157371088
GI number: 157371088
Start: 3126111
End: 3127520
Strand: Direct
Name: pepA [H]
Synonym: Spro_2848
Alternate gene names: 157371088
Gene position: 3126111-3127520 (Clockwise)
Preceding gene: 157371087
Following gene: 157371089
Centisome position: 57.37
GC content: 62.48
Gene sequence:
>1410_bases ATGCAATCAATCGATATTTACCGCGCTAACGGCGCGAGCGAGCGTCAACAAGTGATCCTGTTTGCCGCCGCAGAAGACCA ACTGCCTGCCACATTGCAAAATGCCGGTCTGCAACGGGCGGCCGTCGGCGTACTTTATCCACTGGGTGACAGCCGTTTTG CGCTCAACATCGGCACGCCGCTGACCCCTGCCGCGCTGCAGGATGCCGGTGCGGCGATCGCCGCCGGGCAAAAAGACTAC GGGCTGCAACAGCTCCGCCTGACGCTGGCCCCGGAATTACCGGCTGATGCCGAGAATTGGCGCTGGTTGCTGTTCGGCCT GCGTTTAGGGGCTTACCGCTATCAGCATCACGCCAGCGCGACGCTCACCGATCCCACCCTGCCACTGGCTAGCCAGGACG CGGCCACCCAGGCCCTGTGCGACTGGGCCAATCTGCATGCCGAAGGCGTGATCGCCGGTCGCGAACTGATGAATAAACCG GCCAATATTCTCTATCCAGAGAGCTTTGTAGAAGCGGTAGCACAGTTGCCCTTCCGTCATCTTCGCCAGGAGGTATTGGG GGATGAACAAATGGCGGAGCTGGGCTTTGGCGGCCTGCTCGGGGTCGGCCAGGGCAGCGCCCGTGCGTCGCAGTTGCTGA TCCTCGATCACCACCCGGCCAATGCCCGCCACACGCTGGCACTGGTCGGCAAAGGCGTTACCTTCGACAGCGGCGGCATC AGTATCAAAGGCGCGGCACGCATGAGCACCATGAAGTTCGATATGGGCGGTGCCGCCGCGGTGGTGGGCGCCATGCGCAT TATCGACGCACTGCAATTACCCATCCGCGTCATTGGCCTGTGCGGATTGGTGGAAAACATGCCCTCCTCCCGCGCCCAAC GGCCTGGTGACGTTGTCACTATGCACAATGGTAAATCGGTGGAGATCATTTCCACCGACGCCGAAGGCCGCATGGTGCTG GCGGACGTGATCAGCTATGCCCAGCAACGCTTCCAGCCGGATTATCTGCTGGATATCGCGACCCTGACCGGCGGCGCCGG CGTGGCGCTGGGCAAGGAATATGCCGCCATGATGGGCAACGACGAAGCTTTTCTGGCGCAGGTCACCCAGGCGGGTCAGG TCAGCGCAGAACCGGTGTGGCCGATGCCGCACGGCGGCTGGTATCGCGGCGTGCTGAAGTCTGAATTCGCCGACTACCGC CACGGCGGTGAAGATCCACACGGCAGCCCGTGCGTGGCGGCGACCTTTATCAGCGAATTCGTGCAACCGGGTCAACGCTG GGCGCATCTGGACATCGCCGCCATGTCGACCGATATGCCGCACCGCAAACTGTATGCCAACGGCGCGTCCTCATTCGGCG TGCTGCTGCTGGCACGGCTGAGTTCCCTGCTTGCCGAAACGGAGCACTAA
Upstream 100 bases:
>100_bases CGGCAGTTTCCTGGCGATCGTGCCGCTGTTGATCGCCTTTATCTTCTCGTCCAAACAAATGATGGAAAGCCTCACCCGTG GGGCGGTTAAAGGGTAACTT
Downstream 100 bases:
>100_bases TGGCTTACGTAGAATTGCTTGATATCAACAAACGCTATGACAACGGCTATCAGGCCGCCAGCAACGTTAATCTGCAGGTG GAAAAAGGCGAATTTGTGGT
Product: leucyl aminopeptidase
Products: NA
Alternate protein names: Leucine aminopeptidase; LAP; Leucyl aminopeptidase [H]
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MQSIDIYRANGASERQQVILFAAAEDQLPATLQNAGLQRAAVGVLYPLGDSRFALNIGTPLTPAALQDAGAAIAAGQKDY GLQQLRLTLAPELPADAENWRWLLFGLRLGAYRYQHHASATLTDPTLPLASQDAATQALCDWANLHAEGVIAGRELMNKP ANILYPESFVEAVAQLPFRHLRQEVLGDEQMAELGFGGLLGVGQGSARASQLLILDHHPANARHTLALVGKGVTFDSGGI SIKGAARMSTMKFDMGGAAAVVGAMRIIDALQLPIRVIGLCGLVENMPSSRAQRPGDVVTMHNGKSVEIISTDAEGRMVL ADVISYAQQRFQPDYLLDIATLTGGAGVALGKEYAAMMGNDEAFLAQVTQAGQVSAEPVWPMPHGGWYRGVLKSEFADYR HGGEDPHGSPCVAATFISEFVQPGQRWAHLDIAAMSTDMPHRKLYANGASSFGVLLLARLSSLLAETEH
Sequences:
>Translated_469_residues MQSIDIYRANGASERQQVILFAAAEDQLPATLQNAGLQRAAVGVLYPLGDSRFALNIGTPLTPAALQDAGAAIAAGQKDY GLQQLRLTLAPELPADAENWRWLLFGLRLGAYRYQHHASATLTDPTLPLASQDAATQALCDWANLHAEGVIAGRELMNKP ANILYPESFVEAVAQLPFRHLRQEVLGDEQMAELGFGGLLGVGQGSARASQLLILDHHPANARHTLALVGKGVTFDSGGI SIKGAARMSTMKFDMGGAAAVVGAMRIIDALQLPIRVIGLCGLVENMPSSRAQRPGDVVTMHNGKSVEIISTDAEGRMVL ADVISYAQQRFQPDYLLDIATLTGGAGVALGKEYAAMMGNDEAFLAQVTQAGQVSAEPVWPMPHGGWYRGVLKSEFADYR HGGEDPHGSPCVAATFISEFVQPGQRWAHLDIAAMSTDMPHRKLYANGASSFGVLLLARLSSLLAETEH >Mature_469_residues MQSIDIYRANGASERQQVILFAAAEDQLPATLQNAGLQRAAVGVLYPLGDSRFALNIGTPLTPAALQDAGAAIAAGQKDY GLQQLRLTLAPELPADAENWRWLLFGLRLGAYRYQHHASATLTDPTLPLASQDAATQALCDWANLHAEGVIAGRELMNKP ANILYPESFVEAVAQLPFRHLRQEVLGDEQMAELGFGGLLGVGQGSARASQLLILDHHPANARHTLALVGKGVTFDSGGI SIKGAARMSTMKFDMGGAAAVVGAMRIIDALQLPIRVIGLCGLVENMPSSRAQRPGDVVTMHNGKSVEIISTDAEGRMVL ADVISYAQQRFQPDYLLDIATLTGGAGVALGKEYAAMMGNDEAFLAQVTQAGQVSAEPVWPMPHGGWYRGVLKSEFADYR HGGEDPHGSPCVAATFISEFVQPGQRWAHLDIAAMSTDMPHRKLYANGASSFGVLLLARLSSLLAETEH
Specific function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides [H]
COG id: COG0260
COG function: function code E; Leucyl aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M17 family [H]
Homologues:
Organism=Homo sapiens, GI41393561, Length=304, Percent_Identity=39.4736842105263, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI47155554, Length=293, Percent_Identity=37.542662116041, Blast_Score=177, Evalue=3e-44, Organism=Escherichia coli, GI1790710, Length=311, Percent_Identity=42.1221864951768, Blast_Score=221, Evalue=6e-59, Organism=Escherichia coli, GI87082123, Length=317, Percent_Identity=37.2239747634069, Blast_Score=186, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17556903, Length=294, Percent_Identity=36.0544217687075, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI17565172, Length=240, Percent_Identity=30, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI221379063, Length=287, Percent_Identity=37.2822299651568, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI221379062, Length=287, Percent_Identity=37.2822299651568, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI21357381, Length=287, Percent_Identity=37.2822299651568, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI21355725, Length=281, Percent_Identity=33.4519572953737, Blast_Score=155, Evalue=4e-38, Organism=Drosophila melanogaster, GI24661038, Length=281, Percent_Identity=33.8078291814947, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI20129969, Length=290, Percent_Identity=35.1724137931034, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24662227, Length=290, Percent_Identity=32.0689655172414, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI161077148, Length=303, Percent_Identity=30.03300330033, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI20130057, Length=303, Percent_Identity=30.03300330033, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI21355645, Length=334, Percent_Identity=29.940119760479, Blast_Score=131, Evalue=9e-31, Organism=Drosophila melanogaster, GI24662223, Length=334, Percent_Identity=29.940119760479, Blast_Score=131, Evalue=9e-31, Organism=Drosophila melanogaster, GI19922386, Length=326, Percent_Identity=30.6748466257669, Blast_Score=128, Evalue=7e-30, Organism=Drosophila melanogaster, GI20129963, Length=315, Percent_Identity=30.7936507936508, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI24646701, Length=282, Percent_Identity=30.1418439716312, Blast_Score=96, Evalue=7e-20, Organism=Drosophila melanogaster, GI24646703, Length=282, Percent_Identity=30.1418439716312, Blast_Score=96, Evalue=7e-20, Organism=Drosophila melanogaster, GI21358201, Length=282, Percent_Identity=30.1418439716312, Blast_Score=96, Evalue=7e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011356 - InterPro: IPR000819 - InterPro: IPR023042 - InterPro: IPR008283 [H]
Pfam domain/function: PF00883 Peptidase_M17; PF02789 Peptidase_M17_N [H]
EC number: =3.4.11.1; =3.4.11.10 [H]
Molecular weight: Translated: 50051; Mature: 50051
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSIDIYRANGASERQQVILFAAAEDQLPATLQNAGLQRAAVGVLYPLGDSRFALNIGTP CCCCEEEECCCCCCCEEEEEEEECCCCCCHHHHHCCCHHHHEEEEEECCCCEEEEECCCC LTPAALQDAGAAIAAGQKDYGLQQLRLTLAPELPADAENWRWLLFGLRLGAYRYQHHASA CCHHHHHHCCCEEECCCCCCCHHHEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHCCCC TLTDPTLPLASQDAATQALCDWANLHAEGVIAGRELMNKPANILYPESFVEAVAQLPFRH EECCCCCCCCCCHHHHHHHHHHHHCCCCCEEECHHHHCCCCCEECCHHHHHHHHHCCHHH LRQEVLGDEQMAELGFGGLLGVGQGSARASQLLILDHHPANARHTLALVGKGVTFDSGGI HHHHHHCCHHHHHHCCCCEEECCCCCCCCCEEEEEECCCCCCCEEEEEEECCEEECCCCE SIKGAARMSTMKFDMGGAAAVVGAMRIIDALQLPIRVIGLCGLVENMPSSRAQRPGDVVT EEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEE MHNGKSVEIISTDAEGRMVLADVISYAQQRFQPDYLLDIATLTGGAGVALGKEYAAMMGN EECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCC DEAFLAQVTQAGQVSAEPVWPMPHGGWYRGVLKSEFADYRHGGEDPHGSPCVAATFISEF CHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH VQPGQRWAHLDIAAMSTDMPHRKLYANGASSFGVLLLARLSSLLAETEH HCCCCCEEEEEEEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQSIDIYRANGASERQQVILFAAAEDQLPATLQNAGLQRAAVGVLYPLGDSRFALNIGTP CCCCEEEECCCCCCCEEEEEEEECCCCCCHHHHHCCCHHHHEEEEEECCCCEEEEECCCC LTPAALQDAGAAIAAGQKDYGLQQLRLTLAPELPADAENWRWLLFGLRLGAYRYQHHASA CCHHHHHHCCCEEECCCCCCCHHHEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHCCCC TLTDPTLPLASQDAATQALCDWANLHAEGVIAGRELMNKPANILYPESFVEAVAQLPFRH EECCCCCCCCCCHHHHHHHHHHHHCCCCCEEECHHHHCCCCCEECCHHHHHHHHHCCHHH LRQEVLGDEQMAELGFGGLLGVGQGSARASQLLILDHHPANARHTLALVGKGVTFDSGGI HHHHHHCCHHHHHHCCCCEEECCCCCCCCCEEEEEECCCCCCCEEEEEEECCEEECCCCE SIKGAARMSTMKFDMGGAAAVVGAMRIIDALQLPIRVIGLCGLVENMPSSRAQRPGDVVT EEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEE MHNGKSVEIISTDAEGRMVLADVISYAQQRFQPDYLLDIATLTGGAGVALGKEYAAMMGN EECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCC DEAFLAQVTQAGQVSAEPVWPMPHGGWYRGVLKSEFADYRHGGEDPHGSPCVAATFISEF CHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH VQPGQRWAHLDIAAMSTDMPHRKLYANGASSFGVLLLARLSSLLAETEH HCCCCCEEEEEEEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]