Click here to switch to the map view.

The map label for this gene is nudL [H]

Identifier: 157371049

GI number: 157371049

Start: 3087963

End: 3088541

Strand: Direct

Name: nudL [H]

Synonym: Spro_2809

Alternate gene names: 157371049

Gene position: 3087963-3088541 (Clockwise)

Preceding gene: 157371048

Following gene: 157371050

Centisome position: 56.67

GC content: 57.86

Gene sequence:

>579_bases
ATGAACCCACCGACTTATCCCACCTCGCTGGCGGCCTTTATCAGCCGCTTTCAGCTGCAACTGCCACAGGCATCGCAGAT
TTCACATAACGTTCGGCCCGCAGCGGTGCTGATCCCGATTATCTGCCGCCCCGAACCTACCCTGTTGTTGACCCGCCGCG
CCGACTCACTGCGCAAGCATCCGGGCCAGGTGGCATTTCCGGGGGGTAAAACCGATGCTGAAGACGCCTCGGCGATTATC
ACCGCCCTGCGTGAAGCTCAGGAGGAAGTGGCTATCCCACCTCAGGCCGTGACCATTCTGGGTCAACTGGCCCCCCTCGA
CAGCAGCACCGGTTTTCAGGTGACCCCGGTGGTTGGCTTGATCTCACCCGACGTGCAATTTTTCGCCAATGAAGACGAAG
TGGCCGAGGTTTTTGAAATGCCGCTGCACGAAGCGCTGACGCTTTCGCGCTATTATCCGTTGGATATTCACCGCGCCGGT
CATTCACACCGCATTTATCTGTCCTGGTATCAGAGCCAATTTGTCTGGGGAATGACCGCCGCCATCATTCGACGACTGGC
ACAGCAGGTCAGCATTTAA

Upstream 100 bases:

>100_bases
GTGGCGGCATCGTTGCCGACAGTCAGGAACAGGCGGAATATCAGGAAACCTTTGATAAAGTCGGCCGCATTCTGCCGCAA
TTGGGGGAGTTTATCGCTTC

Downstream 100 bases:

>100_bases
CGCCAATAATGTGATGCCCATCACAAGCCAAACGGTTACCTGCGCAACAGGCGTGGGTAAAGCGATCGGCATCACTTCAT
TGGTTTGCTTTTTAAACTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MNPPTYPTSLAAFISRFQLQLPQASQISHNVRPAAVLIPIICRPEPTLLLTRRADSLRKHPGQVAFPGGKTDAEDASAII
TALREAQEEVAIPPQAVTILGQLAPLDSSTGFQVTPVVGLISPDVQFFANEDEVAEVFEMPLHEALTLSRYYPLDIHRAG
HSHRIYLSWYQSQFVWGMTAAIIRRLAQQVSI

Sequences:

>Translated_192_residues
MNPPTYPTSLAAFISRFQLQLPQASQISHNVRPAAVLIPIICRPEPTLLLTRRADSLRKHPGQVAFPGGKTDAEDASAII
TALREAQEEVAIPPQAVTILGQLAPLDSSTGFQVTPVVGLISPDVQFFANEDEVAEVFEMPLHEALTLSRYYPLDIHRAG
HSHRIYLSWYQSQFVWGMTAAIIRRLAQQVSI
>Mature_192_residues
MNPPTYPTSLAAFISRFQLQLPQASQISHNVRPAAVLIPIICRPEPTLLLTRRADSLRKHPGQVAFPGGKTDAEDASAII
TALREAQEEVAIPPQAVTILGQLAPLDSSTGFQVTPVVGLISPDVQFFANEDEVAEVFEMPLHEALTLSRYYPLDIHRAG
HSHRIYLSWYQSQFVWGMTAAIIRRLAQQVSI

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=109, Percent_Identity=44.0366972477064, Blast_Score=86, Evalue=3e-17,
Organism=Escherichia coli, GI1788115, Length=184, Percent_Identity=63.5869565217391, Blast_Score=213, Evalue=8e-57,
Organism=Caenorhabditis elegans, GI17536993, Length=117, Percent_Identity=38.4615384615385, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI18859683, Length=141, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 21206; Mature: 21206

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01293 UPF0035

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPPTYPTSLAAFISRFQLQLPQASQISHNVRPAAVLIPIICRPEPTLLLTRRADSLRKH
CCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEEECCCCCEEEEECHHHHHCC
PGQVAFPGGKTDAEDASAIITALREAQEEVAIPPQAVTILGQLAPLDSSTGFQVTPVVGL
CCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEEEE
ISPDVQFFANEDEVAEVFEMPLHEALTLSRYYPLDIHRAGHSHRIYLSWYQSQFVWGMTA
ECCCHHEECCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECHHHHHHHHH
AIIRRLAQQVSI
HHHHHHHHHHCC
>Mature Secondary Structure
MNPPTYPTSLAAFISRFQLQLPQASQISHNVRPAAVLIPIICRPEPTLLLTRRADSLRKH
CCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEEECCCCCEEEEECHHHHHCC
PGQVAFPGGKTDAEDASAIITALREAQEEVAIPPQAVTILGQLAPLDSSTGFQVTPVVGL
CCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEEEE
ISPDVQFFANEDEVAEVFEMPLHEALTLSRYYPLDIHRAGHSHRIYLSWYQSQFVWGMTA
ECCCHHEECCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECHHHHHHHHH
AIIRRLAQQVSI
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA