| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is pcaK [H]
Identifier: 157370752
GI number: 157370752
Start: 2758258
End: 2759616
Strand: Reverse
Name: pcaK [H]
Synonym: Spro_2512
Alternate gene names: 157370752
Gene position: 2759616-2758258 (Counterclockwise)
Preceding gene: 157370755
Following gene: 157370747
Centisome position: 50.65
GC content: 57.1
Gene sequence:
>1359_bases GTGGCTTCAAACGAAATTGATGTTCGAACGCTGATCAACGATCGTCCGATATGCGGTTATCAAAAACTGATTATTCTGCT GGGTTTTATCGTTATTGCGCTGGATGGCTTCGATATTACCCTGATGGGGTTTATTGCTCCTGAGCTGAAAAGCCAGTGGG GCGTCAGCAATCAGCAACTTGGCATGGTGATTAGCGCCGCGCTGGTTGGCCTGACGATCGGTGCGCTGCTGGCCGGCCCG CTGGCCGACTGGCTGGGGCGTAAAGTGATCATTATCAACAGCGTGTTCTTTTTTGGCCTCTGGACGCTGGTCACTGCGTT TTCGCACAATATCGATCAAATGATATTTTTCCGTTTTATGACCGGGTTGGGGCTGGGGGCGGCAATGCCGAACGTCGGCA CTTTAATCTCCGAATATGCGCCGGAAAAGAAACGTTCCTTCATTATTACCGTGGTGTTTTGCGGCTTTACCTTCGGTGCC GCGCTGGGCGGGTTCGCGGCGTCATGGGTCATTCCACAAATGGGGTGGCATGCGCTGCTGTTGCTCGGTGGCATATTGCC GCTGCTGAGCGTTCCGCTGTTGATAGCCAGGCTGCCTGAGTCGGTGAGGTTTTTGGTTACCCGGCGGGCCAGCAATCAAC GCATTGGCAAAATTGTGGAAAAGCTGGCGCCGGGCAGTACCAATGCCGAAACCCGTTATACGCTGCCGCCACTGGTGGCA CCTGGCAAGGGAGCCATGCAGATTGTGATCTCGCGGCAGTACCGCCTTGGCAGCCTGATGCTGTGGCTGGGTTATTTCAT GGCGCTGTTTCTGGTTTATCTGCTGGGCAGTTGGTTACCGACGCTGGTAAAAGGCATCGGCATGAGCGTGGCGCAGGCGG CGGTGATTACCGCGCTGTACCAGGCCGGCGGTACCTTAGGCTCGCTGTTTGCCGGCTGGCTGATGGATAGGGTGGATCCA CACCGGGCGCTGGGCATGATTTACCTGCTGGGGGCGGGGCTGACATTGTCGATTGGCCTGGCGTCACACAGCAGCCTGAT GCTCGGTGTGTTGGCACTGGCCTGTGGTTTTTGCCTGAACGGTGCCAATACCGGCATGAACGCGCTATCGGCGCATTATT ACCCAACCGAGGCGCGCGCCACCGGGTCGAGCTGGATGCACGGCGTTGGGCGTATTGGTGCCATCCTGAGCGCCTTTGCC GGTGCGGAAATGCTGGCGTCAGGCTGGGGGTTCGACCGCATTTTTGCCATTATCGCCATTCCGGCGTTGATCACCGCCTG TGCCATCTTTATCAAAGGTGCCAGAGGGTATAACCGTCAGGCGCAGTTGGTCAGCCGGGAAACCGCTAAAGGCCTTTGA
Upstream 100 bases:
>100_bases CCGAGCCGCACGGGAGTTCTTACAGTAGACGCCAGAATCTTTAATCTCGGTTCGATTATCGAACATTTGCATTTATTGGC GGCTGTACCAAGGAAAAATT
Downstream 100 bases:
>100_bases TCTCACTGATTGAGCCGTTGCAATTGGATTTGATCGGCCTGCCGTGCCTGCTCTGCCAGTGAGGAAAACTGTGCCGGACG ATAGAATGTTTTGGGCACCG
Product: major facilitator transporter
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MASNEIDVRTLINDRPICGYQKLIILLGFIVIALDGFDITLMGFIAPELKSQWGVSNQQLGMVISAALVGLTIGALLAGP LADWLGRKVIIINSVFFFGLWTLVTAFSHNIDQMIFFRFMTGLGLGAAMPNVGTLISEYAPEKKRSFIITVVFCGFTFGA ALGGFAASWVIPQMGWHALLLLGGILPLLSVPLLIARLPESVRFLVTRRASNQRIGKIVEKLAPGSTNAETRYTLPPLVA PGKGAMQIVISRQYRLGSLMLWLGYFMALFLVYLLGSWLPTLVKGIGMSVAQAAVITALYQAGGTLGSLFAGWLMDRVDP HRALGMIYLLGAGLTLSIGLASHSSLMLGVLALACGFCLNGANTGMNALSAHYYPTEARATGSSWMHGVGRIGAILSAFA GAEMLASGWGFDRIFAIIAIPALITACAIFIKGARGYNRQAQLVSRETAKGL
Sequences:
>Translated_452_residues MASNEIDVRTLINDRPICGYQKLIILLGFIVIALDGFDITLMGFIAPELKSQWGVSNQQLGMVISAALVGLTIGALLAGP LADWLGRKVIIINSVFFFGLWTLVTAFSHNIDQMIFFRFMTGLGLGAAMPNVGTLISEYAPEKKRSFIITVVFCGFTFGA ALGGFAASWVIPQMGWHALLLLGGILPLLSVPLLIARLPESVRFLVTRRASNQRIGKIVEKLAPGSTNAETRYTLPPLVA PGKGAMQIVISRQYRLGSLMLWLGYFMALFLVYLLGSWLPTLVKGIGMSVAQAAVITALYQAGGTLGSLFAGWLMDRVDP HRALGMIYLLGAGLTLSIGLASHSSLMLGVLALACGFCLNGANTGMNALSAHYYPTEARATGSSWMHGVGRIGAILSAFA GAEMLASGWGFDRIFAIIAIPALITACAIFIKGARGYNRQAQLVSRETAKGL >Mature_451_residues ASNEIDVRTLINDRPICGYQKLIILLGFIVIALDGFDITLMGFIAPELKSQWGVSNQQLGMVISAALVGLTIGALLAGPL ADWLGRKVIIINSVFFFGLWTLVTAFSHNIDQMIFFRFMTGLGLGAAMPNVGTLISEYAPEKKRSFIITVVFCGFTFGAA LGGFAASWVIPQMGWHALLLLGGILPLLSVPLLIARLPESVRFLVTRRASNQRIGKIVEKLAPGSTNAETRYTLPPLVAP GKGAMQIVISRQYRLGSLMLWLGYFMALFLVYLLGSWLPTLVKGIGMSVAQAAVITALYQAGGTLGSLFAGWLMDRVDPH RALGMIYLLGAGLTLSIGLASHSSLMLGVLALACGFCLNGANTGMNALSAHYYPTEARATGSSWMHGVGRIGAILSAFAG AEMLASGWGFDRIFAIIAIPALITACAIFIKGARGYNRQAQLVSRETAKGL
Specific function: Transporter for 4-hydroxybenzoate. Also required for chemotaxis to aromatic acids [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=409, Percent_Identity=25.4278728606357, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI213021148, Length=413, Percent_Identity=24.455205811138, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI166064021, Length=365, Percent_Identity=26.5753424657534, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI87081723, Length=421, Percent_Identity=33.4916864608076, Blast_Score=177, Evalue=2e-45, Organism=Escherichia coli, GI1788074, Length=403, Percent_Identity=27.2952853598015, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI87082231, Length=395, Percent_Identity=24.5569620253165, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1786229, Length=398, Percent_Identity=22.8643216080402, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI87082159, Length=403, Percent_Identity=26.0545905707196, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1788068, Length=419, Percent_Identity=24.582338902148, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI87082404, Length=372, Percent_Identity=21.2365591397849, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788509, Length=134, Percent_Identity=27.6119402985075, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI1789152, Length=339, Percent_Identity=23.3038348082596, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI32564663, Length=401, Percent_Identity=23.9401496259352, Blast_Score=88, Evalue=9e-18, Organism=Drosophila melanogaster, GI24640198, Length=466, Percent_Identity=22.9613733905579, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI24640196, Length=466, Percent_Identity=22.9613733905579, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI24640200, Length=466, Percent_Identity=22.9613733905579, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI19922874, Length=206, Percent_Identity=24.7572815533981, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48279; Mature: 48148
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASNEIDVRTLINDRPICGYQKLIILLGFIVIALDGFDITLMGFIAPELKSQWGVSNQQL CCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCHHH GMVISAALVGLTIGALLAGPLADWLGRKVIIINSVFFFGLWTLVTAFSHNIDQMIFFRFM HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHH TGLGLGAAMPNVGTLISEYAPEKKRSFIITVVFCGFTFGAALGGFAASWVIPQMGWHALL HHCCCCCCCCHHHHHHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGGILPLLSVPLLIARLPESVRFLVTRRASNQRIGKIVEKLAPGSTNAETRYTLPPLVA HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCC PGKGAMQIVISRQYRLGSLMLWLGYFMALFLVYLLGSWLPTLVKGIGMSVAQAAVITALY CCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH QAGGTLGSLFAGWLMDRVDPHRALGMIYLLGAGLTLSIGLASHSSLMLGVLALACGFCLN HCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHC GANTGMNALSAHYYPTEARATGSSWMHGVGRIGAILSAFAGAEMLASGWGFDRIFAIIAI CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH PALITACAIFIKGARGYNRQAQLVSRETAKGL HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure ASNEIDVRTLINDRPICGYQKLIILLGFIVIALDGFDITLMGFIAPELKSQWGVSNQQL CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCHHH GMVISAALVGLTIGALLAGPLADWLGRKVIIINSVFFFGLWTLVTAFSHNIDQMIFFRFM HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHH TGLGLGAAMPNVGTLISEYAPEKKRSFIITVVFCGFTFGAALGGFAASWVIPQMGWHALL HHCCCCCCCCHHHHHHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGGILPLLSVPLLIARLPESVRFLVTRRASNQRIGKIVEKLAPGSTNAETRYTLPPLVA HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCC PGKGAMQIVISRQYRLGSLMLWLGYFMALFLVYLLGSWLPTLVKGIGMSVAQAAVITALY CCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH QAGGTLGSLFAGWLMDRVDPHRALGMIYLLGAGLTLSIGLASHSSLMLGVLALACGFCLN HCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHC GANTGMNALSAHYYPTEARATGSSWMHGVGRIGAILSAFAGAEMLASGWGFDRIFAIIAI CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH PALITACAIFIKGARGYNRQAQLVSRETAKGL HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961399 [H]