| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is pcaK [H]
Identifier: 157370747
GI number: 157370747
Start: 2752865
End: 2754220
Strand: Reverse
Name: pcaK [H]
Synonym: Spro_2507
Alternate gene names: 157370747
Gene position: 2754220-2752865 (Counterclockwise)
Preceding gene: 157370752
Following gene: 157370746
Centisome position: 50.55
GC content: 58.19
Gene sequence:
>1356_bases ATGTCCCAGTCAAATACCATAGAAATTCAATCATTTATTAATAACAACCCGTTCTCCCGCTACCAGTGGCTGATCCTCAT TTTGTGTTTTCTTACCGTGGCGCTGGACGGTTTCGACACTGCGATCATCGGTTTTATCGCCACCTCGTTGGTACAGGACT GGGGAATAGAGAAAACCTCGCTGGGGCCGGTGATGAGTGCGGCGCTGGTGGGGCTAGCCGTGGGGGCGTTGACCGCTGGG CCGTTGGCGGATCGCATCGGTCGCAAGAAGGTGTTGGTGCTGTCGCTGGTGCTGTTCGGCGGTTTCAGCCTGTTGACGGC GTTCGCCACCACCTTGCCAATGCTGACATTATTGCGCTTCTTAACCGGGCTGGGACTGGGTGCGGCAATGCCAAACGCGG CAACCCTGATGTCGGAATATGCGCCGGAGCGCAAGCGTGCGCTGCTGGTCAACCTGATGTTCTGCGGCTTTCCGCTCGGG TCATCGATGGGCGGTTTCGTTTCCGCCTGGTTGATCCCGCACTTCGGTTGGCAGAGCGTGATGGTGCTGGGCGGCGTGAT GCCGCTGCTGTTGGCGGTGGTGCTGATCGTCGCGCTGCCGGAGTCCGCCCGTTTTATGGTGGTGCGTGGCTACCCGGCAC AGCGTATTGCCGCGGTGCTTAAGCGCATTGCACCGCTTAATTTAACCGAACTGCCGCGCTTTAGCCTGGTTGAAGAGGGC CTGGTGAAAGCCAAATCGGCACTGGGGGTGATTTTCTCTCCACGCTATCTGTTGGGCACCCTGATGCTGTGCCTGACCTA CTTTATGGGCCTGATGATCTTCTATCTGCTGACCAGTTGGTTACCGCTGCTGATCCGTGAAACCGGCGCATCCATTCGCC AGGCATCATTGATTACCGCGCTGTTTCCTTTGGGCGGTGGCATTGGCGTGCTGATCATCGGTTGGCTGATGGATCGAATG AATCCGCACAAGGTGGTGGCGGTGGGCTATCTGTTGACCGCGATGTTTGTCTGCGCCATTGGCTACGTTTATACCGATCC CATATTGATGGCGGTGACGGTGTTTATCGCCGGTACCTGCATGAACGGCGCACAGTCCTCAATGCCGGCGCTGGCCGCCG GTTTTTACCCGACGCAGGGACGGGCGACCGGTGTCGCCTGGATGCTGGGGCTGGGGCGTTTCGGGGGCATTCTTGGCGCG ATGAGCGGCGGGGTGCTGATGCAAATGCAGCTGTCATTCAGCACCATTTTCACCCTGCTGGCGATCCCGGCGCTGGTGGC AGCACTGGCGCTGATAGTCAAACATTTTGCTACCAGGGCAACGGCATTGGCCGGCTCGCTCAATAAGGCTTTATAA
Upstream 100 bases:
>100_bases CGAACCAAGTTTCGATAATCGCACAAATGCGACTTTGCCAGGGATAGGCCTGGCCGTTACCGCCGGGGCTATTTAGCCTG GCCAACCCAGGAAGCGCACT
Downstream 100 bases:
>100_bases GGAGATAACCATGCGTACACAAATAGCAATTATTGGTGCCGGCCCGGCCGGATTGATGCTGTCGCATCTGCTGCATTTGC AGGGCATTGAGTCAGTGGTA
Product: benzoate transport
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MSQSNTIEIQSFINNNPFSRYQWLILILCFLTVALDGFDTAIIGFIATSLVQDWGIEKTSLGPVMSAALVGLAVGALTAG PLADRIGRKKVLVLSLVLFGGFSLLTAFATTLPMLTLLRFLTGLGLGAAMPNAATLMSEYAPERKRALLVNLMFCGFPLG SSMGGFVSAWLIPHFGWQSVMVLGGVMPLLLAVVLIVALPESARFMVVRGYPAQRIAAVLKRIAPLNLTELPRFSLVEEG LVKAKSALGVIFSPRYLLGTLMLCLTYFMGLMIFYLLTSWLPLLIRETGASIRQASLITALFPLGGGIGVLIIGWLMDRM NPHKVVAVGYLLTAMFVCAIGYVYTDPILMAVTVFIAGTCMNGAQSSMPALAAGFYPTQGRATGVAWMLGLGRFGGILGA MSGGVLMQMQLSFSTIFTLLAIPALVAALALIVKHFATRATALAGSLNKAL
Sequences:
>Translated_451_residues MSQSNTIEIQSFINNNPFSRYQWLILILCFLTVALDGFDTAIIGFIATSLVQDWGIEKTSLGPVMSAALVGLAVGALTAG PLADRIGRKKVLVLSLVLFGGFSLLTAFATTLPMLTLLRFLTGLGLGAAMPNAATLMSEYAPERKRALLVNLMFCGFPLG SSMGGFVSAWLIPHFGWQSVMVLGGVMPLLLAVVLIVALPESARFMVVRGYPAQRIAAVLKRIAPLNLTELPRFSLVEEG LVKAKSALGVIFSPRYLLGTLMLCLTYFMGLMIFYLLTSWLPLLIRETGASIRQASLITALFPLGGGIGVLIIGWLMDRM NPHKVVAVGYLLTAMFVCAIGYVYTDPILMAVTVFIAGTCMNGAQSSMPALAAGFYPTQGRATGVAWMLGLGRFGGILGA MSGGVLMQMQLSFSTIFTLLAIPALVAALALIVKHFATRATALAGSLNKAL >Mature_450_residues SQSNTIEIQSFINNNPFSRYQWLILILCFLTVALDGFDTAIIGFIATSLVQDWGIEKTSLGPVMSAALVGLAVGALTAGP LADRIGRKKVLVLSLVLFGGFSLLTAFATTLPMLTLLRFLTGLGLGAAMPNAATLMSEYAPERKRALLVNLMFCGFPLGS SMGGFVSAWLIPHFGWQSVMVLGGVMPLLLAVVLIVALPESARFMVVRGYPAQRIAAVLKRIAPLNLTELPRFSLVEEGL VKAKSALGVIFSPRYLLGTLMLCLTYFMGLMIFYLLTSWLPLLIRETGASIRQASLITALFPLGGGIGVLIIGWLMDRMN PHKVVAVGYLLTAMFVCAIGYVYTDPILMAVTVFIAGTCMNGAQSSMPALAAGFYPTQGRATGVAWMLGLGRFGGILGAM SGGVLMQMQLSFSTIFTLLAIPALVAALALIVKHFATRATALAGSLNKAL
Specific function: Transporter for 4-hydroxybenzoate. Also required for chemotaxis to aromatic acids [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=478, Percent_Identity=25.9414225941423, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI7662270, Length=327, Percent_Identity=24.1590214067278, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI216548223, Length=330, Percent_Identity=26.3636363636364, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI213021148, Length=263, Percent_Identity=25.0950570342205, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI262399383, Length=265, Percent_Identity=26.0377358490566, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI73695465, Length=313, Percent_Identity=24.9201277955272, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI166064021, Length=339, Percent_Identity=27.4336283185841, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI154350196, Length=397, Percent_Identity=24.4332493702771, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI296080721, Length=262, Percent_Identity=27.4809160305344, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI8923870, Length=429, Percent_Identity=23.5431235431235, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI296080719, Length=263, Percent_Identity=27.3764258555133, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI24497499, Length=263, Percent_Identity=27.3764258555133, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI296080734, Length=180, Percent_Identity=29.4444444444444, Blast_Score=66, Evalue=5e-11, Organism=Homo sapiens, GI256219598, Length=303, Percent_Identity=21.7821782178218, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI4503847, Length=303, Percent_Identity=21.7821782178218, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI256219483, Length=303, Percent_Identity=21.7821782178218, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI256219543, Length=303, Percent_Identity=21.7821782178218, Blast_Score=66, Evalue=6e-11, Organism=Escherichia coli, GI87081723, Length=392, Percent_Identity=37.7551020408163, Blast_Score=189, Evalue=3e-49, Organism=Escherichia coli, GI87082231, Length=458, Percent_Identity=23.3624454148472, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI87082404, Length=387, Percent_Identity=22.7390180878553, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI87082159, Length=408, Percent_Identity=24.7549019607843, Blast_Score=85, Evalue=8e-18, Organism=Escherichia coli, GI1789152, Length=461, Percent_Identity=22.5596529284165, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1788068, Length=460, Percent_Identity=23.9130434782609, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1788074, Length=290, Percent_Identity=24.8275862068966, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1786229, Length=176, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1789207, Length=314, Percent_Identity=26.1146496815287, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1789515, Length=324, Percent_Identity=22.5308641975309, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI87082320, Length=352, Percent_Identity=21.5909090909091, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI48994889, Length=172, Percent_Identity=28.4883720930233, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1789312, Length=269, Percent_Identity=27.8810408921933, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI32564663, Length=458, Percent_Identity=24.8908296943231, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17565978, Length=211, Percent_Identity=27.4881516587678, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI19922874, Length=451, Percent_Identity=24.6119733924612, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI24640198, Length=453, Percent_Identity=23.841059602649, Blast_Score=95, Evalue=8e-20, Organism=Drosophila melanogaster, GI24640196, Length=453, Percent_Identity=23.841059602649, Blast_Score=95, Evalue=8e-20, Organism=Drosophila melanogaster, GI24640200, Length=453, Percent_Identity=23.841059602649, Blast_Score=95, Evalue=8e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48016; Mature: 47884
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSNTIEIQSFINNNPFSRYQWLILILCFLTVALDGFDTAIIGFIATSLVQDWGIEKTS CCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC LGPVMSAALVGLAVGALTAGPLADRIGRKKVLVLSLVLFGGFSLLTAFATTLPMLTLLRF CHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTGLGLGAAMPNAATLMSEYAPERKRALLVNLMFCGFPLGSSMGGFVSAWLIPHFGWQSV HHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHH MVLGGVMPLLLAVVLIVALPESARFMVVRGYPAQRIAAVLKRIAPLNLTELPRFSLVEEG HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHCCCHHHHHHHH LVKAKSALGVIFSPRYLLGTLMLCLTYFMGLMIFYLLTSWLPLLIRETGASIRQASLITA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LFPLGGGIGVLIIGWLMDRMNPHKVVAVGYLLTAMFVCAIGYVYTDPILMAVTVFIAGTC HHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MNGAQSSMPALAAGFYPTQGRATGVAWMLGLGRFGGILGAMSGGVLMQMQLSFSTIFTLL CCCCHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH AIPALVAALALIVKHFATRATALAGSLNKAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SQSNTIEIQSFINNNPFSRYQWLILILCFLTVALDGFDTAIIGFIATSLVQDWGIEKTS CCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC LGPVMSAALVGLAVGALTAGPLADRIGRKKVLVLSLVLFGGFSLLTAFATTLPMLTLLRF CHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTGLGLGAAMPNAATLMSEYAPERKRALLVNLMFCGFPLGSSMGGFVSAWLIPHFGWQSV HHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHH MVLGGVMPLLLAVVLIVALPESARFMVVRGYPAQRIAAVLKRIAPLNLTELPRFSLVEEG HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHCCCHHHHHHHH LVKAKSALGVIFSPRYLLGTLMLCLTYFMGLMIFYLLTSWLPLLIRETGASIRQASLITA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LFPLGGGIGVLIIGWLMDRMNPHKVVAVGYLLTAMFVCAIGYVYTDPILMAVTVFIAGTC HHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MNGAQSSMPALAAGFYPTQGRATGVAWMLGLGRFGGILGAMSGGVLMQMQLSFSTIFTLL CCCCHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH AIPALVAALALIVKHFATRATALAGSLNKAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961399 [H]