| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yusP [H]
Identifier: 157370526
GI number: 157370526
Start: 2490124
End: 2491611
Strand: Direct
Name: yusP [H]
Synonym: Spro_2286
Alternate gene names: 157370526
Gene position: 2490124-2491611 (Clockwise)
Preceding gene: 157370524
Following gene: 157370529
Centisome position: 45.7
GC content: 58.0
Gene sequence:
>1488_bases ATGACAAATAACGATGCATCAGCCCCAATCGCTCATCGCCCCTTAATCTTGATTGCCTGCATGTTGGCGATGTTTATGTC GGCAATAGAAGCGACCATTGTCGCCACGGCGATGCCAACCATTATCGGCGATCTCGGTGGTTTTTCCCTGCTAGGCTGGG TATTCGCGGTCTATCTATTGGCGCAGGCCATCACTATTCCCATATATGGTCGGCTGGCGGACCTGCTGGGGCGCAAGCGG GTATTTTTCTTTGGTGCATCGCTGTTTTTACTGGGTTCGGTGCTGTGCGGTTTCTCGCCGAACATGTACTGGCTGATCGG TTTTCGTCTGCTGCAGGGGTTGGGGGCCGGGGCGATTATGCCAACCGCGACCACCATTATTGGTGATATCTACAGCCCTA CCGAGCGGCCCAAGGTGATGGGCTATATTTCCAGCGTTTGGGGTGTGTCGGCGATTATTGGACCCTTGCTGGGGGCGTTT ATCGTCCAGCATTTGCCCTGGGCGTTGGTGTTCTGGGTCAACTTGCCGATCGGTCTGTTGGCGATGTTTTTCCTGGCTCG TTATCTGCCTTCCCGTCAGCAGGTGCGCGAACACGCGTTGGATCTGGCGGGGACCGCCTGGCTGACGTTGTTTGTTACCG CGTTGCTGCTGTCACTGCTGCAGGCAGAAAATCTCGGTTGGTGGGTGCTGCCGTTGTTGGCGTTGGCGGCCGTCTCGCTG ATGTTGCTGATCCGCCAGGAACGACGAGCGCCGGAGCCACTGTTTCCGTTGGCGTTATGGCAAAGCCGGGTGATCGTGGC CGGCAATATTGGCGGCCTGGTGATTGGCGCGGCGATGATGGGCATCAGCGCCTTTCTGCCGACCTTTATTCAGGGCGTGA TGGGCGGAACGCCCCTGGAGGCCGGTACCACGCTGGCGCTGATGTCAATTGGCTGGCCGCTGGCCAGTACCTTCAGCGGT CGACTGATGCTGATGACTTCTTATCGCACCACGGCGCTATTGGGAGCGTTGTTATTACTGGCCGGCGGTCTGATTCTGTT GTTGTTGCAGCCGACCGGCGGCTTATTGTGGGGTCGGGTGGCGGCGTTTATGGTCGGTGCCGGTATGGGGTTGTGCAACA CCACGTTTCTGGTTTCGGTGCAGAACGCGGCTCACCACAGCATCCGCGGCATTGCCACCGCCTGCACGGTGTTTACCCGG ATGATGGGTTCGGCCATTGGTACCGCCATTTTGGGCGCAACGCTGAACATCAACTTGCAGTTTCGTTTGCCGCAAACGAC CGATCCGGTACAACAACTGATGGAACCGGCTGCGCGTAGCGCGATGACGCCAGAAATACTGGCGGAGATGACGCAGCAAG TTGCCGCTTCGTTGCATTGGGTGTTTTTGGTTTCTGCACTGTTGTCATTGCTGGCACTGGCGGCGGCGATGCTGATCCCG GCGCGGCACAGACCACAGGGTGAGGGAGAAGAGGCTGAACAGGCTTAA
Upstream 100 bases:
>100_bases ATAATCAGTAAAAACAGGGAAATAGACACCGGTAACGGCAAGCTCTAATTCGGCTGGTATAATTTAAGGCAAACAAGAAT CCACGGTTTGTAATAAAGCT
Downstream 100 bases:
>100_bases ATAAAAAGGAAAGGGCGCACCGAGCGCCCTGAGCGGAAACTATTGCGAGGTTTTGGTATCCTGACTGGTGCCGGTCTGAG CCGCGTCACCATTGTCATCG
Product: EmrB/QacA family drug resistance transporter
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MTNNDASAPIAHRPLILIACMLAMFMSAIEATIVATAMPTIIGDLGGFSLLGWVFAVYLLAQAITIPIYGRLADLLGRKR VFFFGASLFLLGSVLCGFSPNMYWLIGFRLLQGLGAGAIMPTATTIIGDIYSPTERPKVMGYISSVWGVSAIIGPLLGAF IVQHLPWALVFWVNLPIGLLAMFFLARYLPSRQQVREHALDLAGTAWLTLFVTALLLSLLQAENLGWWVLPLLALAAVSL MLLIRQERRAPEPLFPLALWQSRVIVAGNIGGLVIGAAMMGISAFLPTFIQGVMGGTPLEAGTTLALMSIGWPLASTFSG RLMLMTSYRTTALLGALLLLAGGLILLLLQPTGGLLWGRVAAFMVGAGMGLCNTTFLVSVQNAAHHSIRGIATACTVFTR MMGSAIGTAILGATLNINLQFRLPQTTDPVQQLMEPAARSAMTPEILAEMTQQVAASLHWVFLVSALLSLLALAAAMLIP ARHRPQGEGEEAEQA
Sequences:
>Translated_495_residues MTNNDASAPIAHRPLILIACMLAMFMSAIEATIVATAMPTIIGDLGGFSLLGWVFAVYLLAQAITIPIYGRLADLLGRKR VFFFGASLFLLGSVLCGFSPNMYWLIGFRLLQGLGAGAIMPTATTIIGDIYSPTERPKVMGYISSVWGVSAIIGPLLGAF IVQHLPWALVFWVNLPIGLLAMFFLARYLPSRQQVREHALDLAGTAWLTLFVTALLLSLLQAENLGWWVLPLLALAAVSL MLLIRQERRAPEPLFPLALWQSRVIVAGNIGGLVIGAAMMGISAFLPTFIQGVMGGTPLEAGTTLALMSIGWPLASTFSG RLMLMTSYRTTALLGALLLLAGGLILLLLQPTGGLLWGRVAAFMVGAGMGLCNTTFLVSVQNAAHHSIRGIATACTVFTR MMGSAIGTAILGATLNINLQFRLPQTTDPVQQLMEPAARSAMTPEILAEMTQQVAASLHWVFLVSALLSLLALAAAMLIP ARHRPQGEGEEAEQA >Mature_494_residues TNNDASAPIAHRPLILIACMLAMFMSAIEATIVATAMPTIIGDLGGFSLLGWVFAVYLLAQAITIPIYGRLADLLGRKRV FFFGASLFLLGSVLCGFSPNMYWLIGFRLLQGLGAGAIMPTATTIIGDIYSPTERPKVMGYISSVWGVSAIIGPLLGAFI VQHLPWALVFWVNLPIGLLAMFFLARYLPSRQQVREHALDLAGTAWLTLFVTALLLSLLQAENLGWWVLPLLALAAVSLM LLIRQERRAPEPLFPLALWQSRVIVAGNIGGLVIGAAMMGISAFLPTFIQGVMGGTPLEAGTTLALMSIGWPLASTFSGR LMLMTSYRTTALLGALLLLAGGLILLLLQPTGGLLWGRVAAFMVGAGMGLCNTTFLVSVQNAAHHSIRGIATACTVFTRM MGSAIGTAILGATLNINLQFRLPQTTDPVQQLMEPAARSAMTPEILAEMTQQVAASLHWVFLVSALLSLLALAAAMLIPA RHRPQGEGEEAEQA
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1790195, Length=317, Percent_Identity=29.3375394321767, Blast_Score=125, Evalue=6e-30, Organism=Escherichia coli, GI1789042, Length=301, Percent_Identity=31.5614617940199, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1788710, Length=312, Percent_Identity=30.7692307692308, Blast_Score=122, Evalue=5e-29, Organism=Escherichia coli, GI87081983, Length=421, Percent_Identity=28.2660332541568, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1788392, Length=297, Percent_Identity=28.956228956229, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1790146, Length=193, Percent_Identity=29.5336787564767, Blast_Score=81, Evalue=2e-16, Organism=Caenorhabditis elegans, GI32564663, Length=116, Percent_Identity=31.0344827586207, Blast_Score=67, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6319770, Length=479, Percent_Identity=25.678496868476, Blast_Score=101, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6322958, Length=192, Percent_Identity=29.6875, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6321663, Length=149, Percent_Identity=30.8724832214765, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6323735, Length=166, Percent_Identity=28.9156626506024, Blast_Score=80, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6324954, Length=386, Percent_Identity=27.4611398963731, Blast_Score=77, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6325455, Length=157, Percent_Identity=29.9363057324841, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 52820; Mature: 52689
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNNDASAPIAHRPLILIACMLAMFMSAIEATIVATAMPTIIGDLGGFSLLGWVFAVYLL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH AQAITIPIYGRLADLLGRKRVFFFGASLFLLGSVLCGFSPNMYWLIGFRLLQGLGAGAIM HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHH PTATTIIGDIYSPTERPKVMGYISSVWGVSAIIGPLLGAFIVQHLPWALVFWVNLPIGLL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH AMFFLARYLPSRQQVREHALDLAGTAWLTLFVTALLLSLLQAENLGWWVLPLLALAAVSL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH MLLIRQERRAPEPLFPLALWQSRVIVAGNIGGLVIGAAMMGISAFLPTFIQGVMGGTPLE HHHHHHHHCCCCCCCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AGTTLALMSIGWPLASTFSGRLMLMTSYRTTALLGALLLLAGGLILLLLQPTGGLLWGRV CCCHHHHHHHCCCHHHCCCCCEEEEECHHHHHHHHHHHHHHCHHHEEEECCCCCHHHHHH AAFMVGAGMGLCNTTFLVSVQNAAHHSIRGIATACTVFTRMMGSAIGTAILGATLNINLQ HHHHHHCCCCHHCHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE FRLPQTTDPVQQLMEPAARSAMTPEILAEMTQQVAASLHWVFLVSALLSLLALAAAMLIP EECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ARHRPQGEGEEAEQA CCCCCCCCCCCCCCC >Mature Secondary Structure TNNDASAPIAHRPLILIACMLAMFMSAIEATIVATAMPTIIGDLGGFSLLGWVFAVYLL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH AQAITIPIYGRLADLLGRKRVFFFGASLFLLGSVLCGFSPNMYWLIGFRLLQGLGAGAIM HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHH PTATTIIGDIYSPTERPKVMGYISSVWGVSAIIGPLLGAFIVQHLPWALVFWVNLPIGLL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH AMFFLARYLPSRQQVREHALDLAGTAWLTLFVTALLLSLLQAENLGWWVLPLLALAAVSL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH MLLIRQERRAPEPLFPLALWQSRVIVAGNIGGLVIGAAMMGISAFLPTFIQGVMGGTPLE HHHHHHHHCCCCCCCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AGTTLALMSIGWPLASTFSGRLMLMTSYRTTALLGALLLLAGGLILLLLQPTGGLLWGRV CCCHHHHHHHCCCHHHCCCCCEEEEECHHHHHHHHHHHHHHCHHHEEEECCCCCHHHHHH AAFMVGAGMGLCNTTFLVSVQNAAHHSIRGIATACTVFTRMMGSAIGTAILGATLNINLQ HHHHHHCCCCHHCHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE FRLPQTTDPVQQLMEPAARSAMTPEILAEMTQQVAASLHWVFLVSALLSLLALAAAMLIP EECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ARHRPQGEGEEAEQA CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]