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The map label for this gene is ynfA [C]

Identifier: 157370529

GI number: 157370529

Start: 2492558

End: 2492884

Strand: Direct

Name: ynfA [C]

Synonym: Spro_2289

Alternate gene names: 157370529

Gene position: 2492558-2492884 (Clockwise)

Preceding gene: 157370526

Following gene: 157370538

Centisome position: 45.74

GC content: 59.33

Gene sequence:

>327_bases
ATGTTAAAGACCACCCTGTTATTTTTCGCCACCGCACTGGCCGAGATCATTGGCTGTTTCTTGCCCTATTTGTGGCTGAA
AAAAAGCGCCAGTGCCTGGTTGCTGTTGCCGGCAGCGGCCAGTCTGATGCTGTTTGTCTGGTTGTTGACGCTGCACCCGG
CAGCCAGTGGGCGGGTCTACGCGGCCTATGGCGGGGTCTATGTGGCGACGGCGTTATTGTGGTTGCGGGTGGTAGACGGA
GTGAAACTATCAGCGCTGGACTGGTTAGGGGCCGGCGTGGCCCTGGCCGGCATGTTGATTATCGTTTCCGGCTGGCGCGC
GGCCTGA

Upstream 100 bases:

>100_bases
TTACCGCGCCCGCAGGCGTGTTGATAAATATACCATCGCGCTGTCGGACTGCACCAGTCAAGCACGGCCTTGTTTAGTTT
ACAGAGAGAAAGTTTCCCCG

Downstream 100 bases:

>100_bases
GAAACGACGGCAGGGACAGGCCCTGCCGCTCAGGATTAAGACTCGCGGTGGATATTCAACCCGGCAAAGGATTGGCTGAC
CGGCATGATTTCCAGTGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MLKTTLLFFATALAEIIGCFLPYLWLKKSASAWLLLPAAASLMLFVWLLTLHPAASGRVYAAYGGVYVATALLWLRVVDG
VKLSALDWLGAGVALAGMLIIVSGWRAA

Sequences:

>Translated_108_residues
MLKTTLLFFATALAEIIGCFLPYLWLKKSASAWLLLPAAASLMLFVWLLTLHPAASGRVYAAYGGVYVATALLWLRVVDG
VKLSALDWLGAGVALAGMLIIVSGWRAA
>Mature_108_residues
MLKTTLLFFATALAEIIGCFLPYLWLKKSASAWLLLPAAASLMLFVWLLTLHPAASGRVYAAYGGVYVATALLWLRVVDG
VKLSALDWLGAGVALAGMLIIVSGWRAA

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family

Homologues:

Organism=Escherichia coli, GI1787865, Length=105, Percent_Identity=81.9047619047619, Blast_Score=169, Evalue=5e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2289_SERP5 (A8GE50)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001478518.1
- STRING:   A8GE50
- GeneID:   5604797
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_2289
- eggNOG:   COG1742
- HOGENOM:   HBG313568
- OMA:   ALWVIPA
- ProtClustDB:   PRK02237
- BioCyc:   SPRO399741:SPRO_2289-MONOMER
- HAMAP:   MF_00010
- InterPro:   IPR003844

Pfam domain/function: PF02694 UPF0060

EC number: NA

Molecular weight: Translated: 11553; Mature: 11553

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x2503101c)-; HASH(0x2587a84c)-; HASH(0x2582aabc)-; HASH(0x25779c54)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTTLLFFATALAEIIGCFLPYLWLKKSASAWLLLPAAASLMLFVWLLTLHPAASGRVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCEE
AAYGGVYVATALLWLRVVDGVKLSALDWLGAGVALAGMLIIVSGWRAA
EHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
>Mature Secondary Structure
MLKTTLLFFATALAEIIGCFLPYLWLKKSASAWLLLPAAASLMLFVWLLTLHPAASGRVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCEE
AAYGGVYVATALLWLRVVDGVKLSALDWLGAGVALAGMLIIVSGWRAA
EHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA