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The map label for this gene is ydgJ [H]

Identifier: 157370489

GI number: 157370489

Start: 2451336

End: 2452376

Strand: Direct

Name: ydgJ [H]

Synonym: Spro_2249

Alternate gene names: 157370489

Gene position: 2451336-2452376 (Clockwise)

Preceding gene: 157370488

Following gene: 157370490

Centisome position: 44.99

GC content: 58.41

Gene sequence:

>1041_bases
ATGGCAGAAAAACTTCGGGTTGGGCTGGTCGGTTACGGCTATGCCAGCAAAACCTTTCATGCGCCACTGATCGTTGGCAC
TCCCGGCGTAGAGTTGGCCGCCGTTTCCAGCAGCGATGCCGGGAAAGTGCACGCAGACTGGCCGTCGATGACGGTAGTCA
GCGATCCGCAGGCGCTGTTTAACGACCCTTCTATCGATCTGATCGTCATTCCTACCCCCAACGATACCCACTTCCCGCTG
GCACAGCAGGCCATGGCCGCCGGTAAACATGTGGTGGTGGACAAACCATTTACCGTGACGTTGTCACAGGCTCAGGCGTT
AAAACAACAGGCGGAGCAGAGCGGCCGGCTGTTGTCGGTATTCCACAACCGCCGCTGGGACAGTGATTTTCTGACGCTTA
AGACGCTGCTGAAAGAAGGCGCGCTCGGCGAGGTGGTTTATTTCGAATCTCATTTCGATCGCTTCCGGCCAGAAGTGCGT
CAGCGCTGGCGTGAGTTGGGCGGCGCAGGTAGCGGCATTTGGTACGATTTGGGGCCGCATCTGATCGATCAGGCGCTGCA
ACTGTTCGGCAAGCCGGAAACGCTGTTTGTTGATTTGGCCGAACTGCGTCCAGGCGCGCAGTCGGTGGACTATTTCCACG
CGGTGCTCAACTACGGCAAACGTCGGGTGGTCCTGCACGCTACGATGTTGGCGGCGGCGGAATCCGCGCGTTATATCGTG
CATGGCACCCAGGGCAGCTTTATCAAATTTGGCCTGGATCCGCAGGAAGACCGGCTAAAAGCAGGTGAGCGTCTACCGCA
GGCCGACTGGGGTTATGATATGCGCGACGGTGTGGTGACGTTGTCACGTGATGGCGTGCTGGCGGAGAAACCGCTGCTGA
GTATTCCGGGCAACTACCCAGCCTATTACGCGGCTGTGCGTGATGCGATTAACGGTGTGGGTGAAAACCCGGTACCGGCC
GCCGATGCCATCCAGGTGATGGAACTGATCGAACTGGGCCTGGAATCGGCAAAACAGCAAAGAGCGCTGCCGGTAGCCTA
A

Upstream 100 bases:

>100_bases
TGTGGCGGCCTCAAGTTAACATTAAATTTACTTCTTGTTCCCGCCTGCATCATGGTGTCAAATCTGATGGGTCTATTGCG
AGCCAGTAAGAGGAAACACC

Downstream 100 bases:

>100_bases
CCGTCGTGCTTTCCTATCCGGGTTCGGCTGACCGAACCCGCCTTACTCCTCGAAGGATCCGGTTCCATGTCCTGGTTGCA
ACGTCTGCGCATTGATAAAT

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MAEKLRVGLVGYGYASKTFHAPLIVGTPGVELAAVSSSDAGKVHADWPSMTVVSDPQALFNDPSIDLIVIPTPNDTHFPL
AQQAMAAGKHVVVDKPFTVTLSQAQALKQQAEQSGRLLSVFHNRRWDSDFLTLKTLLKEGALGEVVYFESHFDRFRPEVR
QRWRELGGAGSGIWYDLGPHLIDQALQLFGKPETLFVDLAELRPGAQSVDYFHAVLNYGKRRVVLHATMLAAAESARYIV
HGTQGSFIKFGLDPQEDRLKAGERLPQADWGYDMRDGVVTLSRDGVLAEKPLLSIPGNYPAYYAAVRDAINGVGENPVPA
ADAIQVMELIELGLESAKQQRALPVA

Sequences:

>Translated_346_residues
MAEKLRVGLVGYGYASKTFHAPLIVGTPGVELAAVSSSDAGKVHADWPSMTVVSDPQALFNDPSIDLIVIPTPNDTHFPL
AQQAMAAGKHVVVDKPFTVTLSQAQALKQQAEQSGRLLSVFHNRRWDSDFLTLKTLLKEGALGEVVYFESHFDRFRPEVR
QRWRELGGAGSGIWYDLGPHLIDQALQLFGKPETLFVDLAELRPGAQSVDYFHAVLNYGKRRVVLHATMLAAAESARYIV
HGTQGSFIKFGLDPQEDRLKAGERLPQADWGYDMRDGVVTLSRDGVLAEKPLLSIPGNYPAYYAAVRDAINGVGENPVPA
ADAIQVMELIELGLESAKQQRALPVA
>Mature_345_residues
AEKLRVGLVGYGYASKTFHAPLIVGTPGVELAAVSSSDAGKVHADWPSMTVVSDPQALFNDPSIDLIVIPTPNDTHFPLA
QQAMAAGKHVVVDKPFTVTLSQAQALKQQAEQSGRLLSVFHNRRWDSDFLTLKTLLKEGALGEVVYFESHFDRFRPEVRQ
RWRELGGAGSGIWYDLGPHLIDQALQLFGKPETLFVDLAELRPGAQSVDYFHAVLNYGKRRVVLHATMLAAAESARYIVH
GTQGSFIKFGLDPQEDRLKAGERLPQADWGYDMRDGVVTLSRDGVLAEKPLLSIPGNYPAYYAAVRDAINGVGENPVPAA
DAIQVMELIELGLESAKQQRALPVA

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=346, Percent_Identity=74.2774566473989, Blast_Score=545, Evalue=1e-156,
Organism=Escherichia coli, GI1789848, Length=337, Percent_Identity=33.8278931750742, Blast_Score=192, Evalue=3e-50,
Organism=Escherichia coli, GI1787574, Length=196, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37853; Mature: 37721

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKLRVGLVGYGYASKTFHAPLIVGTPGVELAAVSSSDAGKVHADWPSMTVVSDPQALF
CCCCEEEEEEEECCCCCCCCCCEEEECCCCEEEEECCCCCCEEEECCCCEEEECCCHHHH
NDPSIDLIVIPTPNDTHFPLAQQAMAAGKHVVVDKPFTVTLSQAQALKQQAEQSGRLLSV
CCCCEEEEEEECCCCCCCCHHHHHHHCCCEEEECCCCEEEHHHHHHHHHHHHHCCCEEEH
FHNRRWDSDFLTLKTLLKEGALGEVVYFESHFDRFRPEVRQRWRELGGAGSGIWYDLGPH
HHCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHCCHHHHHHHHHHCCCCCCCEECCCHH
LIDQALQLFGKPETLFVDLAELRPGAQSVDYFHAVLNYGKRRVVLHATMLAAAESARYIV
HHHHHHHHHCCCCCEEEEHHHCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHCCCEEEE
HGTQGSFIKFGLDPQEDRLKAGERLPQADWGYDMRDGVVTLSRDGVLAEKPLLSIPGNYP
ECCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEECCCCEECCCCCH
AYYAAVRDAINGVGENPVPAADAIQVMELIELGLESAKQQRALPVA
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AEKLRVGLVGYGYASKTFHAPLIVGTPGVELAAVSSSDAGKVHADWPSMTVVSDPQALF
CCCEEEEEEEECCCCCCCCCCEEEECCCCEEEEECCCCCCEEEECCCCEEEECCCHHHH
NDPSIDLIVIPTPNDTHFPLAQQAMAAGKHVVVDKPFTVTLSQAQALKQQAEQSGRLLSV
CCCCEEEEEEECCCCCCCCHHHHHHHCCCEEEECCCCEEEHHHHHHHHHHHHHCCCEEEH
FHNRRWDSDFLTLKTLLKEGALGEVVYFESHFDRFRPEVRQRWRELGGAGSGIWYDLGPH
HHCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHCCHHHHHHHHHHCCCCCCCEECCCHH
LIDQALQLFGKPETLFVDLAELRPGAQSVDYFHAVLNYGKRRVVLHATMLAAAESARYIV
HHHHHHHHHCCCCCEEEEHHHCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHCCCEEEE
HGTQGSFIKFGLDPQEDRLKAGERLPQADWGYDMRDGVVTLSRDGVLAEKPLLSIPGNYP
ECCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEECCCCEECCCCCH
AYYAAVRDAINGVGENPVPAADAIQVMELIELGLESAKQQRALPVA
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]