| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yfeH [H]
Identifier: 157370490
GI number: 157370490
Start: 2452443
End: 2453441
Strand: Direct
Name: yfeH [H]
Synonym: Spro_2250
Alternate gene names: 157370490
Gene position: 2452443-2453441 (Clockwise)
Preceding gene: 157370489
Following gene: 157370500
Centisome position: 45.01
GC content: 57.66
Gene sequence:
>999_bases ATGTCCTGGTTGCAACGTCTGCGCATTGATAAATTTTTGCTGGTTTTGATTCTGGTGGTGATCGTCGCCTCGGTTTTCCC CTGCGAAGGGATATGGAAAACTTTCTTTGATCGTCTGACCACCGCCGCCATCGCGCTGCTGTTTTTTATGCATGGCGCCA AGCTTTCGCGTGAGGCGATTATCGCCGGCATGGGCCACTGGAAGCTGCATCTGGTGGTGTTCCTCAGCACCTTTGCGCTG TTCCCACTGCTGGGGCTGGCGATGAATTTGATGGTGCCGGGGCTGATGACGCCGACGGTCTATATGGGCTTCCTTTACCT GTGTGCGCTGCCGGCCACGGTGCAGTCGGCCATCGCCTTCACTTCGGCGGCGGGCGGTAACGTGGCGGCGGCGGTATGCA GCGCTTCGGCATCCAGCATCCTCGGCGTTTTCCTCTCGCCGCTGCTGGTGGGCGCACTGATGCACACCCAGGGCGGTGAT ACTGACGTATTACACGCCATCGGTTCGATCATTTTGAAACTGATGGTGCCGTTTGTGGTGGGCCATCTGGCACGGCCGCT GATCGGCAAATGGGTCGATCGCCACCGCAAGCTGATTAATCTTACTGACCGGTCATCGATTTTGCTGGTGGTGTATACCG CCTTCAGCGCCGCGGTGGTAGAGGGCATTTGGCACAAGATTGACGGCTGGTCGCTGCTGACCATCCTGGTGATGTCTCTG GTGCTGCTGACGGTGGTACTGATTATTAACACCTATGCCGCGCGTTGGCTGGGATTCAACACCGCCGACGAGATAACCAT AGTGTTCTGCGGTTCGAAAAAGAGCCTGGCGAACGGTATCCCGATGGCTAACGTGCTGTTCCCGGCGGCGGCAGTGGGTG CGATGGTGTTGCCGCTGATGATTTTCCATCAGGTGCAATTGATGGTGTGTGCCGTGCTGGCCCAGCGCTATGCGCGCAAA ACCGCCAAACAGCGTGCAGAAGTGCAGACGGCCAAGTAA
Upstream 100 bases:
>100_bases GGCAAAACAGCAAAGAGCGCTGCCGGTAGCCTAACCGTCGTGCTTTCCTATCCGGGTTCGGCTGACCGAACCCGCCTTAC TCCTCGAAGGATCCGGTTCC
Downstream 100 bases:
>100_bases AAAATGGGCGCGAAATCGCGTAATAAGAATCTACGTCGTGGCTTAAGTGGGCGTCCCCCTCACCCAAAGGAGAGGGAACA ATATCGCCTCAACTGGTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MSWLQRLRIDKFLLVLILVVIVASVFPCEGIWKTFFDRLTTAAIALLFFMHGAKLSREAIIAGMGHWKLHLVVFLSTFAL FPLLGLAMNLMVPGLMTPTVYMGFLYLCALPATVQSAIAFTSAAGGNVAAAVCSASASSILGVFLSPLLVGALMHTQGGD TDVLHAIGSIILKLMVPFVVGHLARPLIGKWVDRHRKLINLTDRSSILLVVYTAFSAAVVEGIWHKIDGWSLLTILVMSL VLLTVVLIINTYAARWLGFNTADEITIVFCGSKKSLANGIPMANVLFPAAAVGAMVLPLMIFHQVQLMVCAVLAQRYARK TAKQRAEVQTAK
Sequences:
>Translated_332_residues MSWLQRLRIDKFLLVLILVVIVASVFPCEGIWKTFFDRLTTAAIALLFFMHGAKLSREAIIAGMGHWKLHLVVFLSTFAL FPLLGLAMNLMVPGLMTPTVYMGFLYLCALPATVQSAIAFTSAAGGNVAAAVCSASASSILGVFLSPLLVGALMHTQGGD TDVLHAIGSIILKLMVPFVVGHLARPLIGKWVDRHRKLINLTDRSSILLVVYTAFSAAVVEGIWHKIDGWSLLTILVMSL VLLTVVLIINTYAARWLGFNTADEITIVFCGSKKSLANGIPMANVLFPAAAVGAMVLPLMIFHQVQLMVCAVLAQRYARK TAKQRAEVQTAK >Mature_331_residues SWLQRLRIDKFLLVLILVVIVASVFPCEGIWKTFFDRLTTAAIALLFFMHGAKLSREAIIAGMGHWKLHLVVFLSTFALF PLLGLAMNLMVPGLMTPTVYMGFLYLCALPATVQSAIAFTSAAGGNVAAAVCSASASSILGVFLSPLLVGALMHTQGGDT DVLHAIGSIILKLMVPFVVGHLARPLIGKWVDRHRKLINLTDRSSILLVVYTAFSAAVVEGIWHKIDGWSLLTILVMSLV LLTVVLIINTYAARWLGFNTADEITIVFCGSKKSLANGIPMANVLFPAAAVGAMVLPLMIFHQVQLMVCAVLAQRYARKT AKQRAEVQTAK
Specific function: Unknown
COG id: COG0385
COG function: function code R; Predicted Na+-dependent transporter
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71725371, Length=324, Percent_Identity=28.3950617283951, Blast_Score=117, Evalue=2e-26, Organism=Escherichia coli, GI1788749, Length=323, Percent_Identity=65.6346749226006, Blast_Score=394, Evalue=1e-111,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016833 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35961; Mature: 35830
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWLQRLRIDKFLLVLILVVIVASVFPCEGIWKTFFDRLTTAAIALLFFMHGAKLSREAI CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IAGMGHWKLHLVVFLSTFALFPLLGLAMNLMVPGLMTPTVYMGFLYLCALPATVQSAIAF HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TSAAGGNVAAAVCSASASSILGVFLSPLLVGALMHTQGGDTDVLHAIGSIILKLMVPFVV HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GHLARPLIGKWVDRHRKLINLTDRSSILLVVYTAFSAAVVEGIWHKIDGWSLLTILVMSL HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VLLTVVLIINTYAARWLGFNTADEITIVFCGSKKSLANGIPMANVLFPAAAVGAMVLPLM HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHH IFHQVQLMVCAVLAQRYARKTAKQRAEVQTAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SWLQRLRIDKFLLVLILVVIVASVFPCEGIWKTFFDRLTTAAIALLFFMHGAKLSREAI CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IAGMGHWKLHLVVFLSTFALFPLLGLAMNLMVPGLMTPTVYMGFLYLCALPATVQSAIAF HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TSAAGGNVAAAVCSASASSILGVFLSPLLVGALMHTQGGDTDVLHAIGSIILKLMVPFVV HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GHLARPLIGKWVDRHRKLINLTDRSSILLVVYTAFSAAVVEGIWHKIDGWSLLTILVMSL HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VLLTVVLIINTYAARWLGFNTADEITIVFCGSKKSLANGIPMANVLFPAAAVGAMVLPLM HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHH IFHQVQLMVCAVLAQRYARKTAKQRAEVQTAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 7984428 [H]