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The map label for this gene is nlpC [H]

Identifier: 157370401

GI number: 157370401

Start: 2357728

End: 2358192

Strand: Direct

Name: nlpC [H]

Synonym: Spro_2161

Alternate gene names: 157370401

Gene position: 2357728-2358192 (Clockwise)

Preceding gene: 157370400

Following gene: 157370402

Centisome position: 43.27

GC content: 53.12

Gene sequence:

>465_bases
ATGCGGATGCGTATTTGGTTTTTATTAGCCAGTTTAATTCTTGCCGGTTGTAGCAGCCATGCGCCGCCGCCGAGCGGCAA
ATTGGCCGATTCGATTGTGGTTGTTGCTCAGTTAAACGAACAGCTGCGTCAATGGTACGGCGCCCCTTATCGCTATGGCG
GGTTAGACCGCGGTGGCGTCGACTGCTCCGGGTTTGTTTATCGCACCTTCAGCGATCGTTTCGATATGCAATTACCACGC
TCTACTGAAGAGCAAACCTCGCTGGGAACCAAAGTCTCGCGCGATGAGCTGATGCCCGGCGATCTGGTGTTTTTCAAAAC
CGGTGGCGGTGAGAATGGTTTGCACGTTGGCATTTATGACACTAACGATCAGTTTATCCATGCCTCAACCAGCCGCGGCG
TGATACGTTCCTCGCTGAACAACGTCTACTGGAAGAAGGTCTACTGGCAGGCGCGTCGCATTTAG

Upstream 100 bases:

>100_bases
CCCAAAATAGCGCTTTCCTTAGCTGGTGTCGGCTTTGCCTCGCAGGCGGTATGCTTTAGCGGGAGGCATAAAGCGGCAAT
CTGTTCAATGAAGGGATATT

Downstream 100 bases:

>100_bases
CTCTAACCTCTTGATTTGGTGTATCATGGCGGTATCACATTGTTAACGGTGGCCGCCATGAGTAACTTACGCCTGTTGAT
TTCCGATTCCTACGATCCCT

Product: NLP/P60 protein

Products: NA

Alternate protein names: ORF-17 [H]

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MRMRIWFLLASLILAGCSSHAPPPSGKLADSIVVVAQLNEQLRQWYGAPYRYGGLDRGGVDCSGFVYRTFSDRFDMQLPR
STEEQTSLGTKVSRDELMPGDLVFFKTGGGENGLHVGIYDTNDQFIHASTSRGVIRSSLNNVYWKKVYWQARRI

Sequences:

>Translated_154_residues
MRMRIWFLLASLILAGCSSHAPPPSGKLADSIVVVAQLNEQLRQWYGAPYRYGGLDRGGVDCSGFVYRTFSDRFDMQLPR
STEEQTSLGTKVSRDELMPGDLVFFKTGGGENGLHVGIYDTNDQFIHASTSRGVIRSSLNNVYWKKVYWQARRI
>Mature_154_residues
MRMRIWFLLASLILAGCSSHAPPPSGKLADSIVVVAQLNEQLRQWYGAPYRYGGLDRGGVDCSGFVYRTFSDRFDMQLPR
STEEQTSLGTKVSRDELMPGDLVFFKTGGGENGLHVGIYDTNDQFIHASTSRGVIRSSLNNVYWKKVYWQARRI

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788001, Length=140, Percent_Identity=70.7142857142857, Blast_Score=221, Evalue=1e-59,
Organism=Escherichia coli, GI1788501, Length=127, Percent_Identity=51.9685039370079, Blast_Score=134, Evalue=3e-33,
Organism=Escherichia coli, GI1787944, Length=139, Percent_Identity=38.8489208633094, Blast_Score=87, Evalue=4e-19,
Organism=Escherichia coli, GI1786421, Length=126, Percent_Identity=34.1269841269841, Blast_Score=67, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 17356; Mature: 17356

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMRIWFLLASLILAGCSSHAPPPSGKLADSIVVVAQLNEQLRQWYGAPYRYGGLDRGGV
CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
DCSGFVYRTFSDRFDMQLPRSTEEQTSLGTKVSRDELMPGDLVFFKTGGGENGLHVGIYD
CCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEE
TNDQFIHASTSRGVIRSSLNNVYWKKVYWQARRI
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRMRIWFLLASLILAGCSSHAPPPSGKLADSIVVVAQLNEQLRQWYGAPYRYGGLDRGGV
CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
DCSGFVYRTFSDRFDMQLPRSTEEQTSLGTKVSRDELMPGDLVFFKTGGGENGLHVGIYD
CCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEE
TNDQFIHASTSRGVIRSSLNNVYWKKVYWQARRI
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]