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The map label for this gene is arnF

Identifier: 157370400

GI number: 157370400

Start: 2357162

End: 2357554

Strand: Direct

Name: arnF

Synonym: Spro_2160

Alternate gene names: 157370400

Gene position: 2357162-2357554 (Clockwise)

Preceding gene: 157370399

Following gene: 157370401

Centisome position: 43.26

GC content: 53.69

Gene sequence:

>393_bases
ATGAGAGGTTATGCCTGGGGCGCGGCCAGCGTGCTGTTAGTCACGCTGGCACAGTTGCTGATGAAGTGGGGTATGGCGCA
GATCCCCCTGATGTCATTTGCCGATGTCACCCTGAACCTGTTTATGCAGTATTGGTTGCCGTTAGTGGTGGTCAGCGGCG
GTATTTTTGGCTATGCGCTGTCAATGCTGTGTTGGTTCTTCGCGCTGCACCATTTGCCACTCAATCGTGCTTACCCGCTG
TTGAGTGTAAGTTATGCGCTGGTCTATCTGGCGGCGGTGATCCTGCCCTGGTTTAATGAATCCGCCACGCTGCTGAAAAC
CTTGGGCACGCTGTTCATCCTGTTTGGCGTGTGGCTGATTAATAGTCAGGCCAAGGTAAAAACGCCCCAATAG

Upstream 100 bases:

>100_bases
CGCTGGCCGCCCGCTGGCTGTTTAATGAGCCGACTACCGCACGCCATTGGTACGGAGTGGCTTCAATCATGCTGGGGATC
CTGCTGATGAGTATCAATCC

Downstream 100 bases:

>100_bases
CGCGAAAACCGGCGTCAATTCGATTATCTCCTTCACCATGCTTGCCTTTTTCCCCTACAGGGGGATAAATTAGCCCAAAA
TAGCGCTTTCCTTAGCTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: L-Ara4N-phosphoundecaprenol flippase subunit ArnF; Undecaprenyl phosphate-aminoarabinose flippase subunit ArnF

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MRGYAWGAASVLLVTLAQLLMKWGMAQIPLMSFADVTLNLFMQYWLPLVVVSGGIFGYALSMLCWFFALHHLPLNRAYPL
LSVSYALVYLAAVILPWFNESATLLKTLGTLFILFGVWLINSQAKVKTPQ

Sequences:

>Translated_130_residues
MRGYAWGAASVLLVTLAQLLMKWGMAQIPLMSFADVTLNLFMQYWLPLVVVSGGIFGYALSMLCWFFALHHLPLNRAYPL
LSVSYALVYLAAVILPWFNESATLLKTLGTLFILFGVWLINSQAKVKTPQ
>Mature_130_residues
MRGYAWGAASVLLVTLAQLLMKWGMAQIPLMSFADVTLNLFMQYWLPLVVVSGGIFGYALSMLCWFFALHHLPLNRAYPL
LSVSYALVYLAAVILPWFNESATLLKTLGTLFILFGVWLINSQAKVKTPQ

Specific function: Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArnF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARNF_SERP5 (A8GDS1)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001478389.1
- STRING:   A8GDS1
- GeneID:   5605900
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_2160
- eggNOG:   COG0697
- HOGENOM:   HBG682839
- OMA:   CWLAALR
- ProtClustDB:   PRK02971
- BioCyc:   SPRO399741:SPRO_2160-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_00538
- InterPro:   IPR000620
- InterPro:   IPR022832

Pfam domain/function: PF00892 DUF6

EC number: NA

Molecular weight: Translated: 14559; Mature: 14559

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x243b45a4)-; HASH(0x237efb44)-; HASH(0x24e875e0)-; HASH(0x25482220)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGYAWGAASVLLVTLAQLLMKWGMAQIPLMSFADVTLNLFMQYWLPLVVVSGGIFGYAL
CCCCHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SMLCWFFALHHLPLNRAYPLLSVSYALVYLAAVILPWFNESATLLKTLGTLFILFGVWLI
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
NSQAKVKTPQ
CCCCCCCCCH
>Mature Secondary Structure
MRGYAWGAASVLLVTLAQLLMKWGMAQIPLMSFADVTLNLFMQYWLPLVVVSGGIFGYAL
CCCCHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SMLCWFFALHHLPLNRAYPLLSVSYALVYLAAVILPWFNESATLLKTLGTLFILFGVWLI
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
NSQAKVKTPQ
CCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA