| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is pcaK [H]
Identifier: 157370339
GI number: 157370339
Start: 2291700
End: 2293079
Strand: Reverse
Name: pcaK [H]
Synonym: Spro_2097
Alternate gene names: 157370339
Gene position: 2293079-2291700 (Counterclockwise)
Preceding gene: 157370340
Following gene: 157370338
Centisome position: 42.08
GC content: 57.97
Gene sequence:
>1380_bases ATGAGCAACCGCAACATTGTCGACGTCAAAGCGTGGATAGACTCCCGCCCGATTTCCCGCTATCAGTGGCTGGTATTAAT TCTGTGTTTCGTGATCATCATGTTTGATGGTTATGACGCCGCGGTGATGGGTTTTATCGCCCCCGCACTGATTGAAGACT GGGGTATTTCGCGCGCCGAAATGGGCCCGATCCTCGGTGCTGCAATGTTTGGCGTCGCTTTGGGAGCGCTGATCGCCGGC CCCTATTCCGATCGTTTTGGCCGCAAGAAGGTGCTGCTGCTGTCCATTCTGTGCTTTGCGTTGTTCAGCCTGCTGAGCAC CTTCGCCCGCACCCCGCTGGAAATGGCCTTGCTGCGTTTTCTTACCGGCCTGGGCTTGGGCGCGGTGATGCCCAACTGTG TCACGCTGGTGTCAGAGTATATGCCCGAACGCCGCCGCGGCCTGATGATCACCCTGATGTACAGCGGCTTTAATATCGGT TCCGGTGCCGGCGGGTTTATCGCCGCCGCCATGTTACCGCACTATGGCTGGAAGGCGGTGCTGTTCCTGGGCGGCATCAT GCCGCTGCTGATGTTGCCGCTGCTGATTTGGATCCTGCCGGAATCGACGCTGTATATGGTGGTGCGCAACCATCACAAAG AAAAAATTGCCCAAATCCTGCGCCGCGCCGGTGGCGTGTTCAGCGCCGGTACCACCTTCATACTGAAAACCCCGGTGATC CCAAAGAAAGCCCGCGTGCTGCAACTGTTCAGTAATGGTTACGCCAGGGGCACCCTGGTGCTGTGGCTGACCTATTTTAT GGGGCTGTTCGTGATTTACCTGCTCAACGGCTGGCTGCCGACCATCGTGCGCGGCGCCGGTTTCTCACTGGAGCGCGCCG CGATAATCGCCGGTCTGTTCCAACTGGGCGGTACCCTGGGAGGCCTGCTGGTGGGTTACCTGATGGACCGCTTCGTCGCC AAACGGGTGATCGGACTGTTTTATCTGATGGGCATGTTCTGCCTGCTGTCACAGGGTATCTGGGGCTTTGGTCCGACGCT GCTGGCGGTGTTGGTCTTTGTTAGCGGCATGTGTATCAACGGGGCGCAGACCGGTCTGCAAGCATTCTCACCGGCATTCT ACCCCACTGAAATGCGCGCGACCGGCGTCAGCTGGATGCACGGCATCGGCCGCAGCGGCGCCATTATCAGTTCGTCAATG GGTGGCGTATTGCTGGGTATTTTCCCCGGCGCCACCAGCATTTTTATCATTCTGGCGATCCCGGCGTTGCTGGCGGCGAT CACTATCATTAATCATCAAAAGGCACATCCGGCGGAAATGGTTAAGGGCATCGACATCACCGATCTGCCCGCGTTGTCAC GCACCATGAATAACCGGTAA
Upstream 100 bases:
>100_bases TTCTGACAATGCCCACTGACGCTCATTCAATACGTTTCCGGCCTGCAACCAAAGTTTTAATCCGATCACATATTAATAAA AAAAACAGAGAGCGTACCCG
Downstream 100 bases:
>100_bases TTCTTATTAATACAGAGGTAGACGATGGCTAAGATCATTGGCGGATTGGCGGTGTCACACACCCCAACCATCGGTTTTGC AGTGGATCACAACAAGCAGA
Product: major facilitator transporter
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MSNRNIVDVKAWIDSRPISRYQWLVLILCFVIIMFDGYDAAVMGFIAPALIEDWGISRAEMGPILGAAMFGVALGALIAG PYSDRFGRKKVLLLSILCFALFSLLSTFARTPLEMALLRFLTGLGLGAVMPNCVTLVSEYMPERRRGLMITLMYSGFNIG SGAGGFIAAAMLPHYGWKAVLFLGGIMPLLMLPLLIWILPESTLYMVVRNHHKEKIAQILRRAGGVFSAGTTFILKTPVI PKKARVLQLFSNGYARGTLVLWLTYFMGLFVIYLLNGWLPTIVRGAGFSLERAAIIAGLFQLGGTLGGLLVGYLMDRFVA KRVIGLFYLMGMFCLLSQGIWGFGPTLLAVLVFVSGMCINGAQTGLQAFSPAFYPTEMRATGVSWMHGIGRSGAIISSSM GGVLLGIFPGATSIFIILAIPALLAAITIINHQKAHPAEMVKGIDITDLPALSRTMNNR
Sequences:
>Translated_459_residues MSNRNIVDVKAWIDSRPISRYQWLVLILCFVIIMFDGYDAAVMGFIAPALIEDWGISRAEMGPILGAAMFGVALGALIAG PYSDRFGRKKVLLLSILCFALFSLLSTFARTPLEMALLRFLTGLGLGAVMPNCVTLVSEYMPERRRGLMITLMYSGFNIG SGAGGFIAAAMLPHYGWKAVLFLGGIMPLLMLPLLIWILPESTLYMVVRNHHKEKIAQILRRAGGVFSAGTTFILKTPVI PKKARVLQLFSNGYARGTLVLWLTYFMGLFVIYLLNGWLPTIVRGAGFSLERAAIIAGLFQLGGTLGGLLVGYLMDRFVA KRVIGLFYLMGMFCLLSQGIWGFGPTLLAVLVFVSGMCINGAQTGLQAFSPAFYPTEMRATGVSWMHGIGRSGAIISSSM GGVLLGIFPGATSIFIILAIPALLAAITIINHQKAHPAEMVKGIDITDLPALSRTMNNR >Mature_458_residues SNRNIVDVKAWIDSRPISRYQWLVLILCFVIIMFDGYDAAVMGFIAPALIEDWGISRAEMGPILGAAMFGVALGALIAGP YSDRFGRKKVLLLSILCFALFSLLSTFARTPLEMALLRFLTGLGLGAVMPNCVTLVSEYMPERRRGLMITLMYSGFNIGS GAGGFIAAAMLPHYGWKAVLFLGGIMPLLMLPLLIWILPESTLYMVVRNHHKEKIAQILRRAGGVFSAGTTFILKTPVIP KKARVLQLFSNGYARGTLVLWLTYFMGLFVIYLLNGWLPTIVRGAGFSLERAAIIAGLFQLGGTLGGLLVGYLMDRFVAK RVIGLFYLMGMFCLLSQGIWGFGPTLLAVLVFVSGMCINGAQTGLQAFSPAFYPTEMRATGVSWMHGIGRSGAIISSSMG GVLLGIFPGATSIFIILAIPALLAAITIINHQKAHPAEMVKGIDITDLPALSRTMNNR
Specific function: Transporter for 4-hydroxybenzoate. Also required for chemotaxis to aromatic acids [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=434, Percent_Identity=27.4193548387097, Blast_Score=129, Evalue=5e-30, Organism=Homo sapiens, GI213021148, Length=442, Percent_Identity=23.0769230769231, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI7662270, Length=315, Percent_Identity=24.4444444444444, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI166064021, Length=362, Percent_Identity=26.5193370165746, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI216548223, Length=311, Percent_Identity=24.1157556270096, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI8923870, Length=349, Percent_Identity=25.5014326647564, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI262399383, Length=267, Percent_Identity=24.7191011235955, Blast_Score=66, Evalue=8e-11, Organism=Homo sapiens, GI73695465, Length=207, Percent_Identity=25.1207729468599, Blast_Score=66, Evalue=9e-11, Organism=Escherichia coli, GI87081723, Length=391, Percent_Identity=32.9923273657289, Blast_Score=173, Evalue=2e-44, Organism=Escherichia coli, GI87082159, Length=403, Percent_Identity=29.2803970223325, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI87082404, Length=408, Percent_Identity=23.5294117647059, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI87082231, Length=200, Percent_Identity=24.5, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1786229, Length=383, Percent_Identity=24.0208877284595, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1789152, Length=322, Percent_Identity=24.5341614906832, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1788068, Length=453, Percent_Identity=20.5298013245033, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788074, Length=382, Percent_Identity=24.3455497382199, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI2367379, Length=327, Percent_Identity=22.9357798165138, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI1789515, Length=318, Percent_Identity=22.9559748427673, Blast_Score=65, Evalue=9e-12, Organism=Caenorhabditis elegans, GI32564663, Length=424, Percent_Identity=24.5283018867925, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI32565921, Length=417, Percent_Identity=25.1798561151079, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI19922874, Length=386, Percent_Identity=25.6476683937824, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24640198, Length=223, Percent_Identity=25.5605381165919, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24640196, Length=223, Percent_Identity=25.5605381165919, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24640200, Length=223, Percent_Identity=25.5605381165919, Blast_Score=74, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49806; Mature: 49675
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRNIVDVKAWIDSRPISRYQWLVLILCFVIIMFDGYDAAVMGFIAPALIEDWGISRAE CCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHH MGPILGAAMFGVALGALIAGPYSDRFGRKKVLLLSILCFALFSLLSTFARTPLEMALLRF HHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH LTGLGLGAVMPNCVTLVSEYMPERRRGLMITLMYSGFNIGSGAGGFIAAAMLPHYGWKAV HHHCCHHHHHHHHHHHHHHHCCHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHH LFLGGIMPLLMLPLLIWILPESTLYMVVRNHHKEKIAQILRRAGGVFSAGTTFILKTPVI HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEECCCC PKKARVLQLFSNGYARGTLVLWLTYFMGLFVIYLLNGWLPTIVRGAGFSLERAAIIAGLF CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHH QLGGTLGGLLVGYLMDRFVAKRVIGLFYLMGMFCLLSQGIWGFGPTLLAVLVFVSGMCIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC GAQTGLQAFSPAFYPTEMRATGVSWMHGIGRSGAIISSSMGGVLLGIFPGATSIFIILAI CHHHHHHHHCCCCCCCHHHHCCHHHHHCCCCCCCCHHCCCCCEEEEECCCHHHHHHHHHH PALLAAITIINHQKAHPAEMVKGIDITDLPALSRTMNNR HHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHCCC >Mature Secondary Structure SNRNIVDVKAWIDSRPISRYQWLVLILCFVIIMFDGYDAAVMGFIAPALIEDWGISRAE CCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHH MGPILGAAMFGVALGALIAGPYSDRFGRKKVLLLSILCFALFSLLSTFARTPLEMALLRF HHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH LTGLGLGAVMPNCVTLVSEYMPERRRGLMITLMYSGFNIGSGAGGFIAAAMLPHYGWKAV HHHCCHHHHHHHHHHHHHHHCCHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHH LFLGGIMPLLMLPLLIWILPESTLYMVVRNHHKEKIAQILRRAGGVFSAGTTFILKTPVI HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEECCCC PKKARVLQLFSNGYARGTLVLWLTYFMGLFVIYLLNGWLPTIVRGAGFSLERAAIIAGLF CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHH QLGGTLGGLLVGYLMDRFVAKRVIGLFYLMGMFCLLSQGIWGFGPTLLAVLVFVSGMCIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC GAQTGLQAFSPAFYPTEMRATGVSWMHGIGRSGAIISSSMGGVLLGIFPGATSIFIILAI CHHHHHHHHCCCCCCCHHHHCCHHHHHCCCCCCCCHHCCCCCEEEEECCCHHHHHHHHHH PALLAAITIINHQKAHPAEMVKGIDITDLPALSRTMNNR HHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961399 [H]