| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is tolA [H]
Identifier: 157370291
GI number: 157370291
Start: 2243251
End: 2243691
Strand: Direct
Name: tolA [H]
Synonym: Spro_2049
Alternate gene names: 157370291
Gene position: 2243251-2243691 (Clockwise)
Preceding gene: 157370290
Following gene: 157370295
Centisome position: 41.17
GC content: 51.25
Gene sequence:
>441_bases ATGAATAGAGTTCATTTAGGGTTTAAAAAAAACCTGCCGGCATTAATGCTTATTGTCGTCTCACTTTGGCTGACAGGCTG TACCAAGACGAACGCTGTGGCTAACGCTGGGCCGTCTGCGGAGGGTGTCGACGATCTTTTTGCTGCCCTTGACGGCAAAG CAACTCCTGCAGCAGGGGATGAGGTCAGCCACTATGCCGGGCAGGTACGGGCGGCGATTCAAAGTCATTTTTATGATGCC AACGCTTATGCCGGCAAGCAATGTACTATCAGAATGAAGTTTGCCCCGGATGGGATGCTTTTGGCTGTCCGCTCTGAAAG TGGTGATCCTGCGCTTTGCCGGGCTGCTATAAAGGCAATCACAAATACCCGTTTCCCCAAGCCGCCGTCACAAGCGGTTT ACGGTGCTTTTAAAGATTCCGTACTGGAATTTCGCCCCTAA
Upstream 100 bases:
>100_bases AAACACATGTAATGGTGTTTTGCGTTTGAATAAGAACGGGAGCCTGATGGCTCCCGTTTTTTATTGTTCTTTCCAGTGAC TATTCTAAAAGAAGGGAATC
Downstream 100 bases:
>100_bases GCGGCTGAATGACATAACTATCGTTAAACGTCTGTAATTGTGTTTAAGCATTTGAACAACAACGGGAGCCGTAGGGCTCC CGTTGTTTACTGCCGTTTTA
Product: colicin uptake-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MNRVHLGFKKNLPALMLIVVSLWLTGCTKTNAVANAGPSAEGVDDLFAALDGKATPAAGDEVSHYAGQVRAAIQSHFYDA NAYAGKQCTIRMKFAPDGMLLAVRSESGDPALCRAAIKAITNTRFPKPPSQAVYGAFKDSVLEFRP
Sequences:
>Translated_146_residues MNRVHLGFKKNLPALMLIVVSLWLTGCTKTNAVANAGPSAEGVDDLFAALDGKATPAAGDEVSHYAGQVRAAIQSHFYDA NAYAGKQCTIRMKFAPDGMLLAVRSESGDPALCRAAIKAITNTRFPKPPSQAVYGAFKDSVLEFRP >Mature_146_residues MNRVHLGFKKNLPALMLIVVSLWLTGCTKTNAVANAGPSAEGVDDLFAALDGKATPAAGDEVSHYAGQVRAAIQSHFYDA NAYAGKQCTIRMKFAPDGMLLAVRSESGDPALCRAAIKAITNTRFPKPPSQAVYGAFKDSVLEFRP
Specific function: Involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3, and K). Necessary for the colicins to reach their respective targets after initial binding to the bacteria. Also involved in the translocation of bacteriophage DNA [H]
COG id: COG3064
COG function: function code M; Membrane protein involved in colicin uptake
Gene ontology:
Cell location: Cell inner membrane; Single-pass type II membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786960, Length=112, Percent_Identity=50.8928571428571, Blast_Score=117, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014161 [H]
Pfam domain/function: PF06519 TolA [H]
EC number: NA
Molecular weight: Translated: 15541; Mature: 15541
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRVHLGFKKNLPALMLIVVSLWLTGCTKTNAVANAGPSAEGVDDLFAALDGKATPAAGD CCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC EVSHYAGQVRAAIQSHFYDANAYAGKQCTIRMKFAPDGMLLAVRSESGDPALCRAAIKAI HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHH TNTRFPKPPSQAVYGAFKDSVLEFRP HCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MNRVHLGFKKNLPALMLIVVSLWLTGCTKTNAVANAGPSAEGVDDLFAALDGKATPAAGD CCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC EVSHYAGQVRAAIQSHFYDANAYAGKQCTIRMKFAPDGMLLAVRSESGDPALCRAAIKAI HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHH TNTRFPKPPSQAVYGAFKDSVLEFRP HCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2687247; 8905232; 9278503; 2068069; 8978668; 10404600 [H]