| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370295
Identifier: 157370295
GI number: 157370295
Start: 2246509
End: 2247546
Strand: Direct
Name: 157370295
Synonym: Spro_2053
Alternate gene names: NA
Gene position: 2246509-2247546 (Clockwise)
Preceding gene: 157370291
Following gene: 157370296
Centisome position: 41.23
GC content: 56.07
Gene sequence:
>1038_bases ATGGCAGGCAAGAAAACCACCCTGGCCGCCATTGCCAGAGAGGCACATGTTGGTATCGCTACGGTTGATCGGGTAATAAA CCAGCGCGCAACAGTACGGCCGGAAACGGCACGCAGGGTCATTGCGGCGGCGCACAAATTAGGCTTCGCACTAGAGAAAT CGCATCAACTGTTTGAGACGATGGGCCAACCAGCCGCACGGATTAAAATGGGCTTTATCCTGCTGCGCAAGGAACATTCG TTCTACGCACAATTGGCGGATAGCCTGCTGGAACAGGCCGCACCCTATTACGACGCTGAGCACCCGCCACAGTTCATGTT TCATGATATCAGTGCGGTCAGCGACACCGCTGCCGCCATCACACAGTTAAGCCAAAATGTGGATGTGATCGGCGTGCTGG CGCTGGATAACCCGATGATCCGTTTTGCGGTGGAAGAGGCTAGCAGGCAGGGGGTAAAGGTATTCACGTTGCTGTCTGAT TTATCGGTACACAGCCGTGCCGGTTATATCGGCTGGGATAACCAGCAGGCAGGTCGTACCGCCGGCTGGGCGGTGGAGCG CTTGTGCCATCGGCAGGGCGATGTCGGGGTCATTATCGGCGATAACCGTTTTCTGTGTCAGGAAACCTGCGAAATCAGCT TTCGATCTTACCTGCGCGAACACCTGAGTGGTCTGCGGGTGCTTGAGCCGGTACGCAGTCATGAACGGACCGAAAGCGCA AGACAAGTCACTCAAACCTTGCTGGAGCAGCATCCCAATCTGGTGGCTCTGTATGCACCCTGCGGGGGTGTGGAAGGGAT TATTGCTGCGCTGCGGGAAAGCGGCAGGCAGCATCAGGTGATGCTGATTTGCCATGGCCCGGTTACAGGTGGCGAAATGG CGCTGATCGACGGCACGCTGGATCTGATGCTCAGACATCGTATTGCCGAGTTTGCGGCGTCAGTCATCAGCACTTTTGTC GCCGCCACCGTTGGCGGCTCCTCCGGTTTTAGTCACACCATTAACCGCTTTGATCTGATCACCAAAGAAAACCTCTGA
Upstream 100 bases:
>100_bases CATTACGCATTAACGCGCCCGATCACACAAAAACGGCAGCCTGATTTCTATGGGCGGCTGGGACATGATAGTTTTTATCA AAATCATGAGGGAGACGATT
Downstream 100 bases:
>100_bases TAGTCGGCTCCCTCTGGCGGAGCCGTTCTTCATTATAAATATCCCAATCTCCCAGGCGCTTCGGCCCATCTGGTTTTGAT AAAAAACTATCATTTAAGCT
Product: LacI family transcription regulator
Products: NA
Alternate protein names: LacI Family Transcription Regulator; LacI Family Transcriptional Regulator; Regulatory Protein LacI; Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator Protein LacI Family; Transcription Regulator Protein; LacI Regulatory Protein; LacI Family Regulatory Protein; Transcriptional Regulator LacI Family Protein; HTH-Type Transcriptional Repressor Purr; Laci-Family Transcription Regulator; HTH-Type Transcriptional Repressor PurR; HTH-Type Transcriptional Regulator MalR; Transcriptional Regulatory Protein LacI Family; Transcriptional Regulator Protein Laci-Family; Transcription Regulator; ABC-Type Sugar Transport System Periplasmic Component; Regulatory Protein; Sugar ABC Transporter Periplasmic Protein; Laci-Related Transcriptional Regulator Protein; LacI Family Regulatory
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MAGKKTTLAAIAREAHVGIATVDRVINQRATVRPETARRVIAAAHKLGFALEKSHQLFETMGQPAARIKMGFILLRKEHS FYAQLADSLLEQAAPYYDAEHPPQFMFHDISAVSDTAAAITQLSQNVDVIGVLALDNPMIRFAVEEASRQGVKVFTLLSD LSVHSRAGYIGWDNQQAGRTAGWAVERLCHRQGDVGVIIGDNRFLCQETCEISFRSYLREHLSGLRVLEPVRSHERTESA RQVTQTLLEQHPNLVALYAPCGGVEGIIAALRESGRQHQVMLICHGPVTGGEMALIDGTLDLMLRHRIAEFAASVISTFV AATVGGSSGFSHTINRFDLITKENL
Sequences:
>Translated_345_residues MAGKKTTLAAIAREAHVGIATVDRVINQRATVRPETARRVIAAAHKLGFALEKSHQLFETMGQPAARIKMGFILLRKEHS FYAQLADSLLEQAAPYYDAEHPPQFMFHDISAVSDTAAAITQLSQNVDVIGVLALDNPMIRFAVEEASRQGVKVFTLLSD LSVHSRAGYIGWDNQQAGRTAGWAVERLCHRQGDVGVIIGDNRFLCQETCEISFRSYLREHLSGLRVLEPVRSHERTESA RQVTQTLLEQHPNLVALYAPCGGVEGIIAALRESGRQHQVMLICHGPVTGGEMALIDGTLDLMLRHRIAEFAASVISTFV AATVGGSSGFSHTINRFDLITKENL >Mature_344_residues AGKKTTLAAIAREAHVGIATVDRVINQRATVRPETARRVIAAAHKLGFALEKSHQLFETMGQPAARIKMGFILLRKEHSF YAQLADSLLEQAAPYYDAEHPPQFMFHDISAVSDTAAAITQLSQNVDVIGVLALDNPMIRFAVEEASRQGVKVFTLLSDL SVHSRAGYIGWDNQQAGRTAGWAVERLCHRQGDVGVIIGDNRFLCQETCEISFRSYLREHLSGLRVLEPVRSHERTESAR QVTQTLLEQHPNLVALYAPCGGVEGIIAALRESGRQHQVMLICHGPVTGGEMALIDGTLDLMLRHRIAEFAASVISTFVA ATVGGSSGFSHTINRFDLITKENL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37831; Mature: 37700
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKKTTLAAIAREAHVGIATVDRVINQRATVRPETARRVIAAAHKLGFALEKSHQLFET CCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MGQPAARIKMGFILLRKEHSFYAQLADSLLEQAAPYYDAEHPPQFMFHDISAVSDTAAAI HCCCHHHHHHEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH TQLSQNVDVIGVLALDNPMIRFAVEEASRQGVKVFTLLSDLSVHSRAGYIGWDNQQAGRT HHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCH AGWAVERLCHRQGDVGVIIGDNRFLCQETCEISFRSYLREHLSGLRVLEPVRSHERTESA HHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQVTQTLLEQHPNLVALYAPCGGVEGIIAALRESGRQHQVMLICHGPVTGGEMALIDGTL HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEHHHH DLMLRHRIAEFAASVISTFVAATVGGSSGFSHTINRFDLITKENL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure AGKKTTLAAIAREAHVGIATVDRVINQRATVRPETARRVIAAAHKLGFALEKSHQLFET CCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MGQPAARIKMGFILLRKEHSFYAQLADSLLEQAAPYYDAEHPPQFMFHDISAVSDTAAAI HCCCHHHHHHEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH TQLSQNVDVIGVLALDNPMIRFAVEEASRQGVKVFTLLSDLSVHSRAGYIGWDNQQAGRT HHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCH AGWAVERLCHRQGDVGVIIGDNRFLCQETCEISFRSYLREHLSGLRVLEPVRSHERTESA HHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQVTQTLLEQHPNLVALYAPCGGVEGIIAALRESGRQHQVMLICHGPVTGGEMALIDGTL HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEHHHH DLMLRHRIAEFAASVISTFVAATVGGSSGFSHTINRFDLITKENL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA