| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is aldH [H]
Identifier: 157370079
GI number: 157370079
Start: 2021201
End: 2022811
Strand: Reverse
Name: aldH [H]
Synonym: Spro_1837
Alternate gene names: 157370079
Gene position: 2022811-2021201 (Counterclockwise)
Preceding gene: 157370080
Following gene: 157370078
Centisome position: 37.12
GC content: 61.58
Gene sequence:
>1611_bases ATGTCCAACGCTTATACCATCCGTGGTCAACAGTTTATCGGCGGTCAACGCCGTGCCAGCGGTGAGGCCGAACTGGTCAG CCTGCGTGCCGATAACGGCCAGCCAACCGGCCACCGTTTTTTCTCGGCCAGCATCGCAGAAACCGCCGCCGCCGCCGATG CCGCCGCACAGGCGTTCACCGCCTATTCACAACTCAGTGCCGAACGGCGGGCTGACTTCCTTGAGGCGATTGCCGGGCAG TTGGATGCACTGGATGAGGAATTTTTTAACTACGCCATGCAGGAGACCGCTCTACCATTAGCTCGTCTGAGCGGTGAACG CGCCAGAACCAGTGGCCAGATGCGGTTATTTGCCAGCCTGTTGCGCCGTGGTGATGTGCACGGCGTACGCATAGACTGCG CCTTGCCGCAGCGCACACCGCTGCCGCGTCCGGATCTGCGCCAATACCGCACGGCGCTCGGGCCGGTGGCAGTGTTTGGT GCCAGCAATTTCCCGTTGGCCTTCTCTACCGCAGGCGGTGATACCGCCGCTGCCCTGGCCGCAGGCTGCCCGGTGGTATT CAAGGCGCACAGCGGCCACATGATCACCGCCGAGCTGACCGCACAGGCGATTGAACGGGCCAGAGAGCAGCAACAGATCC CGGCCGGGGTATTCAACATGATTTACGGCGACCGCATCGGCGCGGAACTGGTACAGCACCCGGCCATTCAGGCGGTGGGC TTTACCGGTTCGCTGCGCGGCGGCAGAGCCTTGTTCGATCTGGCCATGCGCCGTCCGCAGCCGATCCCGGTCTTTGCCGA GATGTCGAGCATCAACCCGCTGATCATCATGCCGCAGGCCTTAGCCCAACGTGGGCAGCAGATCGCACGCGAGCTGGTGG CCTCATTCACTCTGGGTTGCGGCCAGTTCTGTACCAAGCCGGGGCTGATCATCGGCCAACGCAGTGAAGCATTCAGTCAA TTTATGGGTGAATTAACCGAGCAGGTGAACGCCGCCGCTCCGCAACCGATGCTCAATATCGGCACGCTGGCACATTACCG CAGCGGATTGGCAGCACTGGATCAGCACGACGGCATTCGCCATCTGGCCGGCAGCCGCGAGGCCCCCCCTTTTTTAGCCG CACCGCAACTGTATCAGGCCGATATCGGCTTACTGCTCAGCGGCAATCCCTTGCTGCAGGAGGAAGTGTTTGGCCCGGTA GCCATTCTGGTGACGGTGGAAAATCATCAGCAACTGACCGCCGCACTGGAAAGCTTGCAAGGCCAACTGACCGCCACGCT GCTGACCGACCCAGAGGATCTGGCCGATGCCGAACCGCTGGCGCAGTTGCTGACCCGCAAGGCCGGTCGGGTGCTGTTCA ATGGCTACCCAACCGGGGTCGAAGTGTGCGATGCCATGATACACGGCGGCCCTTATCCGGCCACCAGCGATGCACGCGGC AGTTCGGTCGGTACCCTGGCCATTGAACGCTTCCTGCGCCCGGTTTGTTTGCAAAATTACCCGGCCGCATTGTTGCCGCC AGCGTTACAAGACAGTAATCCACTGGGCCTGTTACGGCTGGTGAACGGTATTTACACCCGAGATCCGATCCACTCACCTG CCAACAACTAG
Upstream 100 bases:
>100_bases AGCGCTGGCAAATCGCCCTGAATTGCCGGACGTCGGCCTGTAATTGCCACTCTCGCCCGGCCGCCTGCCGGGCCTGAACA CCAGCCAACCGGGGGAACCC
Downstream 100 bases:
>100_bases CCCGGCCGCATCTGCATGCCACCTAATAACAAAAGGGTAAACCCATGACAACCCAAGGCAAATTCAAGAAGCAGCTTACG CTCACCGATTTGACGTTTAT
Product: aldehyde dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 536; Mature: 535
Protein sequence:
>536_residues MSNAYTIRGQQFIGGQRRASGEAELVSLRADNGQPTGHRFFSASIAETAAAADAAAQAFTAYSQLSAERRADFLEAIAGQ LDALDEEFFNYAMQETALPLARLSGERARTSGQMRLFASLLRRGDVHGVRIDCALPQRTPLPRPDLRQYRTALGPVAVFG ASNFPLAFSTAGGDTAAALAAGCPVVFKAHSGHMITAELTAQAIERAREQQQIPAGVFNMIYGDRIGAELVQHPAIQAVG FTGSLRGGRALFDLAMRRPQPIPVFAEMSSINPLIIMPQALAQRGQQIARELVASFTLGCGQFCTKPGLIIGQRSEAFSQ FMGELTEQVNAAAPQPMLNIGTLAHYRSGLAALDQHDGIRHLAGSREAPPFLAAPQLYQADIGLLLSGNPLLQEEVFGPV AILVTVENHQQLTAALESLQGQLTATLLTDPEDLADAEPLAQLLTRKAGRVLFNGYPTGVEVCDAMIHGGPYPATSDARG SSVGTLAIERFLRPVCLQNYPAALLPPALQDSNPLGLLRLVNGIYTRDPIHSPANN
Sequences:
>Translated_536_residues MSNAYTIRGQQFIGGQRRASGEAELVSLRADNGQPTGHRFFSASIAETAAAADAAAQAFTAYSQLSAERRADFLEAIAGQ LDALDEEFFNYAMQETALPLARLSGERARTSGQMRLFASLLRRGDVHGVRIDCALPQRTPLPRPDLRQYRTALGPVAVFG ASNFPLAFSTAGGDTAAALAAGCPVVFKAHSGHMITAELTAQAIERAREQQQIPAGVFNMIYGDRIGAELVQHPAIQAVG FTGSLRGGRALFDLAMRRPQPIPVFAEMSSINPLIIMPQALAQRGQQIARELVASFTLGCGQFCTKPGLIIGQRSEAFSQ FMGELTEQVNAAAPQPMLNIGTLAHYRSGLAALDQHDGIRHLAGSREAPPFLAAPQLYQADIGLLLSGNPLLQEEVFGPV AILVTVENHQQLTAALESLQGQLTATLLTDPEDLADAEPLAQLLTRKAGRVLFNGYPTGVEVCDAMIHGGPYPATSDARG SSVGTLAIERFLRPVCLQNYPAALLPPALQDSNPLGLLRLVNGIYTRDPIHSPANN >Mature_535_residues SNAYTIRGQQFIGGQRRASGEAELVSLRADNGQPTGHRFFSASIAETAAAADAAAQAFTAYSQLSAERRADFLEAIAGQL DALDEEFFNYAMQETALPLARLSGERARTSGQMRLFASLLRRGDVHGVRIDCALPQRTPLPRPDLRQYRTALGPVAVFGA SNFPLAFSTAGGDTAAALAAGCPVVFKAHSGHMITAELTAQAIERAREQQQIPAGVFNMIYGDRIGAELVQHPAIQAVGF TGSLRGGRALFDLAMRRPQPIPVFAEMSSINPLIIMPQALAQRGQQIARELVASFTLGCGQFCTKPGLIIGQRSEAFSQF MGELTEQVNAAAPQPMLNIGTLAHYRSGLAALDQHDGIRHLAGSREAPPFLAAPQLYQADIGLLLSGNPLLQEEVFGPVA ILVTVENHQQLTAALESLQGQLTATLLTDPEDLADAEPLAQLLTRKAGRVLFNGYPTGVEVCDAMIHGGPYPATSDARGS SVGTLAIERFLRPVCLQNYPAALLPPALQDSNPLGLLRLVNGIYTRDPIHSPANN
Specific function: Catalyzes the oxidation of long-chain aliphatic aldehydes to acids. May be implicated in controlling luminescence as it catalyzes the oxidation of the fatty aldehyde substrate for the light-emitting reaction [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldehyde dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI12007648, Length=406, Percent_Identity=26.6009852216749, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI115387104, Length=363, Percent_Identity=23.9669421487603, Blast_Score=71, Evalue=3e-12, Organism=Escherichia coli, GI1789015, Length=431, Percent_Identity=25.0580046403712, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87081896, Length=450, Percent_Identity=26, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1786504, Length=299, Percent_Identity=28.0936454849498, Blast_Score=66, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71995606, Length=423, Percent_Identity=24.822695035461, Blast_Score=75, Evalue=9e-14, Organism=Caenorhabditis elegans, GI25143874, Length=339, Percent_Identity=25.6637168141593, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25143876, Length=339, Percent_Identity=25.6637168141593, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI281362580, Length=395, Percent_Identity=25.0632911392405, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI62472918, Length=395, Percent_Identity=25.0632911392405, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI62472926, Length=395, Percent_Identity=25.0632911392405, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI62472936, Length=395, Percent_Identity=25.0632911392405, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI21356737, Length=395, Percent_Identity=25.0632911392405, Blast_Score=88, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 [H]
Pfam domain/function: PF00171 Aldedh [H]
EC number: =1.2.1.4 [H]
Molecular weight: Translated: 57217; Mature: 57086
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAYTIRGQQFIGGQRRASGEAELVSLRADNGQPTGHRFFSASIAETAAAADAAAQAFT CCCCEEECCHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AYSQLSAERRADFLEAIAGQLDALDEEFFNYAMQETALPLARLSGERARTSGQMRLFASL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHH LRRGDVHGVRIDCALPQRTPLPRPDLRQYRTALGPVAVFGASNFPLAFSTAGGDTAAALA HHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCEEEECCCCCCEEEECCCCCHHHHHH AGCPVVFKAHSGHMITAELTAQAIERAREQQQIPAGVFNMIYGDRIGAELVQHPAIQAVG CCCCEEEEECCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEC FTGSLRGGRALFDLAMRRPQPIPVFAEMSSINPLIIMPQALAQRGQQIARELVASFTLGC CCCCCCCCHHHHHHHHCCCCCCCEEEHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCH GQFCTKPGLIIGQRSEAFSQFMGELTEQVNAAAPQPMLNIGTLAHYRSGLAALDQHDGIR HHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHH HLAGSREAPPFLAAPQLYQADIGLLLSGNPLLQEEVFGPVAILVTVENHQQLTAALESLQ HHCCCCCCCCCCCCCCHHHCCCCEEECCCCHHHHHHCCCEEEEEEECCHHHHHHHHHHHC GQLTATLLTDPEDLADAEPLAQLLTRKAGRVLFNGYPTGVEVCDAMIHGGPYPATSDARG CCEEEEEECCCHHHCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCC SSVGTLAIERFLRPVCLQNYPAALLPPALQDSNPLGLLRLVNGIYTRDPIHSPANN CCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SNAYTIRGQQFIGGQRRASGEAELVSLRADNGQPTGHRFFSASIAETAAAADAAAQAFT CCCEEECCHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AYSQLSAERRADFLEAIAGQLDALDEEFFNYAMQETALPLARLSGERARTSGQMRLFASL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHH LRRGDVHGVRIDCALPQRTPLPRPDLRQYRTALGPVAVFGASNFPLAFSTAGGDTAAALA HHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCEEEECCCCCCEEEECCCCCHHHHHH AGCPVVFKAHSGHMITAELTAQAIERAREQQQIPAGVFNMIYGDRIGAELVQHPAIQAVG CCCCEEEEECCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEC FTGSLRGGRALFDLAMRRPQPIPVFAEMSSINPLIIMPQALAQRGQQIARELVASFTLGC CCCCCCCCHHHHHHHHCCCCCCCEEEHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCH GQFCTKPGLIIGQRSEAFSQFMGELTEQVNAAAPQPMLNIGTLAHYRSGLAALDQHDGIR HHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHH HLAGSREAPPFLAAPQLYQADIGLLLSGNPLLQEEVFGPVAILVTVENHQQLTAALESLQ HHCCCCCCCCCCCCCCHHHCCCCEEECCCCHHHHHHCCCEEEEEEECCHHHHHHHHHHHC GQLTATLLTDPEDLADAEPLAQLLTRKAGRVLFNGYPTGVEVCDAMIHGGPYPATSDARG CCEEEEEECCCHHHCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCC SSVGTLAIERFLRPVCLQNYPAALLPPALQDSNPLGLLRLVNGIYTRDPIHSPANN CCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8527447; 10903148 [H]