| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yveA [H]
Identifier: 157370078
GI number: 157370078
Start: 2019591
End: 2021156
Strand: Reverse
Name: yveA [H]
Synonym: Spro_1836
Alternate gene names: 157370078
Gene position: 2021156-2019591 (Counterclockwise)
Preceding gene: 157370079
Following gene: 157370077
Centisome position: 37.09
GC content: 57.54
Gene sequence:
>1566_bases ATGACAACCCAAGGCAAATTCAAGAAGCAGCTTACGCTCACCGATTTGACGTTTATCGGCCTGGGCGCAATCTTTGGTTC CGGCTGGCTGTTCGCCGCCAGCCACGTCTCCTCCATTGCCGGCCCCGCCGGCATTTACTCCTGGCTGATCGGCGGGTTGG CCGTGCTACTGCTCGGCATTGTTTATTGCGAGCTGGGTGCTGCACTGCCCCGGGCCGGCGGCATTATCCGCTACCCGGTA TTCTCCCACGGCGAACTGATGGGTTATCTGCTGGGGTTTATTACCCTGATCGCCTTCTCCAGCCTGATATCGATTGAGAT CGTCGCGGCCCGCCAGTACGCCGCCGCCTGGTTTCCTTTTCTGAGCCAGCCCGGCTCCGGCAACCCAACGCTAATCGGTT GGCTGGTCCAGCTCCTGCTGCTGTGCTTTTTCTTCGCCCTGAATTACTACAGCGTCAAAACCTTTGCCAAATCCAACAAT CTGATCAGCGTGATTAAATTTGTGGTACCGCTGCTGGTGATTGTGGTGCTGTTCAGCTTCTTCAAACCCGAAAACCTGCA CAGCCAGGGGTTTGCGCCCTTTGGCTCCGCCGGGGTGGAAGCGGCCATTTCTGCCGGGGGAATTATCTTCGCCTATCTGG GCCTGACGCCGATTATCTCGGTCGCCAGCGAAGTGCAAAATCCGCAGCGTACCATTCCTGTCGCGCTGATCCTGTCGGTG GTGCTGTCCACCATCATTTATGTGCTGCTGCAGGTGGCCTTCCTCGGCAGTATTCCCAGTGAGATGCTGAGCGGCGGCTG GGCCGGTATCAGTCAGCAATTCTCACTGCCTTACCGTGATATCGCCATCACCCTGGGGATGGGCTGGCTGGCGTTTCTGG TGGTGAGCGATGCGATTATCTCACCGAGCGGCACCGGCAATATTTACATGAACGCCACCCCACGCGTGATATACGGCTGG GCTCGTGCAGGCACTTTCTTTAAGATCTTTACCCGCGTCGACGGTGAGTCCGGCATTCCGCGCCCTGCCCTGTGGCTGAC CTTTGCGTTGTCGATCTTCTGGACGCTGCCCTTCCCCTCCTGGGAGAAGTTGATCGGCGTGGTTTCCGCCGCGCTGGTGC TGAGCTACGCCATTGCGCCGGTGACTGCTGCCGGTCTGCGCCGCAATGCGCCAGATCTGCCGCGTCCCTTCTTCGTGCGC GGCTTCTGCGTGCTCGGTCCGGTGTCATTTATCATTTCGGCGCTGATTGTCTATTGGTCCGGCTGGAACACCGTTTCCTG GCTGCTGGGCCTGCAGATCCTGATGTTCGTGGTTTATATCCTGTTCAAAAACAAGGTGCCAACCCACGCCGTTAGTCTGA AGCAACAGATTTGGTCGTCGCTGTGGCTGATAGCCTTCTATGCGCTGATTATTGTCGCGTCCTATCTCGGCAGCTTTGGT GGCATCAACGCTATTGGTCACCCGTGGGACACCCTCACGGTGGCGGTCATTGCGTTGGCAATCTATTACTGGGGCGCCTA TACCTGTTTACCTCAGGCAAATTTTGCCGGTGATGAGGAAGAGTAA
Upstream 100 bases:
>100_bases GGCTGGTGAACGGTATTTACACCCGAGATCCGATCCACTCACCTGCCAACAACTAGCCCGGCCGCATCTGCATGCCACCT AATAACAAAAGGGTAAACCC
Downstream 100 bases:
>100_bases CCGTAAAGGAGATATGTAATGACGCAAACCCAGAGTCTGACGCTGAAAGAAGCCTATGAACTAGCATTGCGCGCATTGCG CAGCAACGGTTTCAGTGCCG
Product: amino acid permease-associated protein
Products: Proton [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: L-aspartate transporter [H]
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MTTQGKFKKQLTLTDLTFIGLGAIFGSGWLFAASHVSSIAGPAGIYSWLIGGLAVLLLGIVYCELGAALPRAGGIIRYPV FSHGELMGYLLGFITLIAFSSLISIEIVAARQYAAAWFPFLSQPGSGNPTLIGWLVQLLLLCFFFALNYYSVKTFAKSNN LISVIKFVVPLLVIVVLFSFFKPENLHSQGFAPFGSAGVEAAISAGGIIFAYLGLTPIISVASEVQNPQRTIPVALILSV VLSTIIYVLLQVAFLGSIPSEMLSGGWAGISQQFSLPYRDIAITLGMGWLAFLVVSDAIISPSGTGNIYMNATPRVIYGW ARAGTFFKIFTRVDGESGIPRPALWLTFALSIFWTLPFPSWEKLIGVVSAALVLSYAIAPVTAAGLRRNAPDLPRPFFVR GFCVLGPVSFIISALIVYWSGWNTVSWLLGLQILMFVVYILFKNKVPTHAVSLKQQIWSSLWLIAFYALIIVASYLGSFG GINAIGHPWDTLTVAVIALAIYYWGAYTCLPQANFAGDEEE
Sequences:
>Translated_521_residues MTTQGKFKKQLTLTDLTFIGLGAIFGSGWLFAASHVSSIAGPAGIYSWLIGGLAVLLLGIVYCELGAALPRAGGIIRYPV FSHGELMGYLLGFITLIAFSSLISIEIVAARQYAAAWFPFLSQPGSGNPTLIGWLVQLLLLCFFFALNYYSVKTFAKSNN LISVIKFVVPLLVIVVLFSFFKPENLHSQGFAPFGSAGVEAAISAGGIIFAYLGLTPIISVASEVQNPQRTIPVALILSV VLSTIIYVLLQVAFLGSIPSEMLSGGWAGISQQFSLPYRDIAITLGMGWLAFLVVSDAIISPSGTGNIYMNATPRVIYGW ARAGTFFKIFTRVDGESGIPRPALWLTFALSIFWTLPFPSWEKLIGVVSAALVLSYAIAPVTAAGLRRNAPDLPRPFFVR GFCVLGPVSFIISALIVYWSGWNTVSWLLGLQILMFVVYILFKNKVPTHAVSLKQQIWSSLWLIAFYALIIVASYLGSFG GINAIGHPWDTLTVAVIALAIYYWGAYTCLPQANFAGDEEE >Mature_520_residues TTQGKFKKQLTLTDLTFIGLGAIFGSGWLFAASHVSSIAGPAGIYSWLIGGLAVLLLGIVYCELGAALPRAGGIIRYPVF SHGELMGYLLGFITLIAFSSLISIEIVAARQYAAAWFPFLSQPGSGNPTLIGWLVQLLLLCFFFALNYYSVKTFAKSNNL ISVIKFVVPLLVIVVLFSFFKPENLHSQGFAPFGSAGVEAAISAGGIIFAYLGLTPIISVASEVQNPQRTIPVALILSVV LSTIIYVLLQVAFLGSIPSEMLSGGWAGISQQFSLPYRDIAITLGMGWLAFLVVSDAIISPSGTGNIYMNATPRVIYGWA RAGTFFKIFTRVDGESGIPRPALWLTFALSIFWTLPFPSWEKLIGVVSAALVLSYAIAPVTAAGLRRNAPDLPRPFFVRG FCVLGPVSFIISALIVYWSGWNTVSWLLGLQILMFVVYILFKNKVPTHAVSLKQQIWSSLWLIAFYALIIVASYLGSFGG INAIGHPWDTLTVAVIALAIYYWGAYTCLPQANFAGDEEE
Specific function: Uptake of L-aspartate with the concomitant import of a proton. Can also transport aspartate hydroxamate and L-glutamate with lower affinity and efficiency [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. AGT (TC 2.A.3.11) family [H]
Homologues:
Organism=Homo sapiens, GI110347453, Length=358, Percent_Identity=26.2569832402235, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI258614005, Length=435, Percent_Identity=23.448275862069, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI258614003, Length=435, Percent_Identity=23.448275862069, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI258645169, Length=383, Percent_Identity=23.4986945169713, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI181337167, Length=414, Percent_Identity=24.1545893719807, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI33286428, Length=409, Percent_Identity=24.9388753056235, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI187423910, Length=405, Percent_Identity=22.962962962963, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI7657591, Length=405, Percent_Identity=22.962962962963, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI115648063, Length=441, Percent_Identity=25.1700680272109, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI115648022, Length=441, Percent_Identity=25.1700680272109, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1788480, Length=357, Percent_Identity=28.0112044817927, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI87081708, Length=360, Percent_Identity=23.8888888888889, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI87082250, Length=359, Percent_Identity=26.1838440111421, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1790653, Length=365, Percent_Identity=23.013698630137, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1786602, Length=438, Percent_Identity=24.6575342465753, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1786302, Length=405, Percent_Identity=23.4567901234568, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI2367353, Length=373, Percent_Identity=23.8605898123324, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17540018, Length=412, Percent_Identity=27.6699029126214, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17532491, Length=413, Percent_Identity=24.9394673123487, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17531343, Length=423, Percent_Identity=26.241134751773, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17533459, Length=408, Percent_Identity=25, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17568033, Length=396, Percent_Identity=27.7777777777778, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI32566699, Length=316, Percent_Identity=24.0506329113924, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71995388, Length=407, Percent_Identity=23.0958230958231, Blast_Score=65, Evalue=9e-11, Organism=Caenorhabditis elegans, GI71995382, Length=407, Percent_Identity=23.0958230958231, Blast_Score=65, Evalue=1e-10, Organism=Drosophila melanogaster, GI24667468, Length=406, Percent_Identity=26.1083743842365, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI45550968, Length=419, Percent_Identity=26.7303102625298, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI19921172, Length=419, Percent_Identity=26.7303102625298, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI21357367, Length=411, Percent_Identity=26.5206812652068, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI221512776, Length=419, Percent_Identity=23.1503579952267, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24666159, Length=419, Percent_Identity=23.1503579952267, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24668806, Length=420, Percent_Identity=22.6190476190476, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI21356285, Length=420, Percent_Identity=22.6190476190476, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI24668802, Length=420, Percent_Identity=22.6190476190476, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI221331183, Length=354, Percent_Identity=24.8587570621469, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI17647653, Length=354, Percent_Identity=24.8587570621469, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24664379, Length=354, Percent_Identity=24.8587570621469, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI161077963, Length=353, Percent_Identity=25.7790368271955, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24651635, Length=448, Percent_Identity=23.6607142857143, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24651633, Length=448, Percent_Identity=23.6607142857143, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24641993, Length=402, Percent_Identity=24.6268656716418, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI24641995, Length=387, Percent_Identity=25.0645994832041, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 56396; Mature: 56265
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQGKFKKQLTLTDLTFIGLGAIFGSGWLFAASHVSSIAGPAGIYSWLIGGLAVLLLGI CCCCCCHHHHEEHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VYCELGAALPRAGGIIRYPVFSHGELMGYLLGFITLIAFSSLISIEIVAARQYAAAWFPF HHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSQPGSGNPTLIGWLVQLLLLCFFFALNYYSVKTFAKSNNLISVIKFVVPLLVIVVLFSF HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FKPENLHSQGFAPFGSAGVEAAISAGGIIFAYLGLTPIISVASEVQNPQRTIPVALILSV CCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VLSTIIYVLLQVAFLGSIPSEMLSGGWAGISQQFSLPYRDIAITLGMGWLAFLVVSDAII HHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC SPSGTGNIYMNATPRVIYGWARAGTFFKIFTRVDGESGIPRPALWLTFALSIFWTLPFPS CCCCCCCEEEECCCCEEEEHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC WEKLIGVVSAALVLSYAIAPVTAAGLRRNAPDLPRPFFVRGFCVLGPVSFIISALIVYWS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GWNTVSWLLGLQILMFVVYILFKNKVPTHAVSLKQQIWSSLWLIAFYALIIVASYLGSFG CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GINAIGHPWDTLTVAVIALAIYYWGAYTCLPQANFAGDEEE CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TTQGKFKKQLTLTDLTFIGLGAIFGSGWLFAASHVSSIAGPAGIYSWLIGGLAVLLLGI CCCCCHHHHEEHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VYCELGAALPRAGGIIRYPVFSHGELMGYLLGFITLIAFSSLISIEIVAARQYAAAWFPF HHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSQPGSGNPTLIGWLVQLLLLCFFFALNYYSVKTFAKSNNLISVIKFVVPLLVIVVLFSF HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FKPENLHSQGFAPFGSAGVEAAISAGGIIFAYLGLTPIISVASEVQNPQRTIPVALILSV CCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VLSTIIYVLLQVAFLGSIPSEMLSGGWAGISQQFSLPYRDIAITLGMGWLAFLVVSDAII HHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC SPSGTGNIYMNATPRVIYGWARAGTFFKIFTRVDGESGIPRPALWLTFALSIFWTLPFPS CCCCCCCEEEECCCCEEEEHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC WEKLIGVVSAALVLSYAIAPVTAAGLRRNAPDLPRPFFVRGFCVLGPVSFIISALIVYWS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GWNTVSWLLGLQILMFVVYILFKNKVPTHAVSLKQQIWSSLWLIAFYALIIVASYLGSFG CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GINAIGHPWDTLTVAVIALAIYYWGAYTCLPQANFAGDEEE CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-lysine [Periplasm] = Proton [Cytoplasm] + L-lysine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 12730183 [H]