| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yeeZ [H]
Identifier: 157369860
GI number: 157369860
Start: 1771856
End: 1772680
Strand: Direct
Name: yeeZ [H]
Synonym: Spro_1617
Alternate gene names: 157369860
Gene position: 1771856-1772680 (Clockwise)
Preceding gene: 157369851
Following gene: 157369862
Centisome position: 32.52
GC content: 60.0
Gene sequence:
>825_bases ATGAAAAAGGTAGCCATTATTGGCCTGGGTTGGTTGGGTATGCCGCTGGCTCTGTCGCTGATGAGCCGTGGGTTTGACGT TGTTGGCAGTAAAACCACGCCGGATGGCGTCGAGGCCGCACGGATGAGCGGGATCGAATGCTATCAGCTGGAACTGACGC CGGAACTGATTTGCGAACCGGAGGATCTGGAGGCGCTGCTGCGCGTCGATGCGCTGGTGATAACACTCCCAGCCCGCCGC ACCGTCGAAGGCAGCGAAAACTATTTTAATGCGGTGCGCATGCTGGTGGACAGCGCGATGGCCTTCGGTGTGCCGCGCAT TCTGTTTACCAGTTCAACCTCGGTGTACGGGGAAACCACGGGCACGGTACGCGAAGATTCGCCGCTGAAGCCGGTTTCAC CTTCCGGCCTGGTGCTGGCAGAGCTGGAGCGTTGGCTGCATGAACTGCCGAACACCTCGGTGGATATTTTGCGTCTGGCG GGGCTGGTGGGGGGCGATCGCCATCCCGGGCGTTTCCTAGCGGGCAAAGTCGATGTCAAAGGCGGTTCGCAAGGAGTCAA TCTGGTGCATCAGGACGACGTGATCGGCGCGATCCAACTGTTGCTGAAACTGCCGAAAGGCGGCCACGTTTATAACCTGT GCGCCCCGGCCCATCCCACCAAGCGTGAGTTCTACCCGGCTCTGGCCGAACAGTTAAATCTGTCGCCGCCGCAGTTTGCC GCCGAGACGGAGCAGGGCGGTCGTCTGGTGGACGGCAGCCGTATCTGCAATGAACTGGGGTTTGAATATCAGTACCCGGA TCCGGCGCGTATGCCGGTCAACTAA
Upstream 100 bases:
>100_bases ACGCGACTTTACCTAAGCTTAAGGTCGGTGGATTGAATCACTACGCCGACTGGCGTAGCCTTAATGGGCAAAGCGTTGCA GTCTTCAAGAGAGGAAGCTG
Downstream 100 bases:
>100_bases GCGTTTAGAACATGCCCTGCCAAGTGCGGGGCATTTTTTTATCCAGCGTGCAGGGTTACTGCATCAACACCATAGCGGCT GAAATCTCTCCGGCGCGCTG
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MKKVAIIGLGWLGMPLALSLMSRGFDVVGSKTTPDGVEAARMSGIECYQLELTPELICEPEDLEALLRVDALVITLPARR TVEGSENYFNAVRMLVDSAMAFGVPRILFTSSTSVYGETTGTVREDSPLKPVSPSGLVLAELERWLHELPNTSVDILRLA GLVGGDRHPGRFLAGKVDVKGGSQGVNLVHQDDVIGAIQLLLKLPKGGHVYNLCAPAHPTKREFYPALAEQLNLSPPQFA AETEQGGRLVDGSRICNELGFEYQYPDPARMPVN
Sequences:
>Translated_274_residues MKKVAIIGLGWLGMPLALSLMSRGFDVVGSKTTPDGVEAARMSGIECYQLELTPELICEPEDLEALLRVDALVITLPARR TVEGSENYFNAVRMLVDSAMAFGVPRILFTSSTSVYGETTGTVREDSPLKPVSPSGLVLAELERWLHELPNTSVDILRLA GLVGGDRHPGRFLAGKVDVKGGSQGVNLVHQDDVIGAIQLLLKLPKGGHVYNLCAPAHPTKREFYPALAEQLNLSPPQFA AETEQGGRLVDGSRICNELGFEYQYPDPARMPVN >Mature_274_residues MKKVAIIGLGWLGMPLALSLMSRGFDVVGSKTTPDGVEAARMSGIECYQLELTPELICEPEDLEALLRVDALVITLPARR TVEGSENYFNAVRMLVDSAMAFGVPRILFTSSTSVYGETTGTVREDSPLKPVSPSGLVLAELERWLHELPNTSVDILRLA GLVGGDRHPGRFLAGKVDVKGGSQGVNLVHQDDVIGAIQLLLKLPKGGHVYNLCAPAHPTKREFYPALAEQLNLSPPQFA AETEQGGRLVDGSRICNELGFEYQYPDPARMPVN
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788327, Length=274, Percent_Identity=66.7883211678832, Blast_Score=352, Evalue=1e-98,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR016040 [H]
Pfam domain/function: PF01370 Epimerase [H]
EC number: NA
Molecular weight: Translated: 29664; Mature: 29664
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVAIIGLGWLGMPLALSLMSRGFDVVGSKTTPDGVEAARMSGIECYQLELTPELICEP CCEEEEEEECHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHCCCEEEEEECCHHHHCCC EDLEALLRVDALVITLPARRTVEGSENYFNAVRMLVDSAMAFGVPRILFTSSTSVYGETT HHHHHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC GTVREDSPLKPVSPSGLVLAELERWLHELPNTSVDILRLAGLVGGDRHPGRFLAGKVDVK CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEC GGSQGVNLVHQDDVIGAIQLLLKLPKGGHVYNLCAPAHPTKREFYPALAEQLNLSPPQFA CCCCCCCEEECCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCHH AETEQGGRLVDGSRICNELGFEYQYPDPARMPVN CCCCCCCEEECHHHHHHHHCCEECCCCCCCCCCC >Mature Secondary Structure MKKVAIIGLGWLGMPLALSLMSRGFDVVGSKTTPDGVEAARMSGIECYQLELTPELICEP CCEEEEEEECHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHCCCEEEEEECCHHHHCCC EDLEALLRVDALVITLPARRTVEGSENYFNAVRMLVDSAMAFGVPRILFTSSTSVYGETT HHHHHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC GTVREDSPLKPVSPSGLVLAELERWLHELPNTSVDILRLAGLVGGDRHPGRFLAGKVDVK CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEC GGSQGVNLVHQDDVIGAIQLLLKLPKGGHVYNLCAPAHPTKREFYPALAEQLNLSPPQFA CCCCCCCEEECCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCHH AETEQGGRLVDGSRICNELGFEYQYPDPARMPVN CCCCCCCEEECHHHHHHHHCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]