| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157369797
Identifier: 157369797
GI number: 157369797
Start: 1694800
End: 1695036
Strand: Direct
Name: 157369797
Synonym: Spro_1554
Alternate gene names: NA
Gene position: 1694800-1695036 (Clockwise)
Preceding gene: 157369796
Following gene: 157369798
Centisome position: 31.1
GC content: 49.37
Gene sequence:
>237_bases ATGCCAGTAAAACAACGAACGACGCAAAGCGTTACCATGACGGTAGAACGCAGCTTGTTGAGCCGTGCACGTGAGGCGGG TATTAACCTCAGTGCTACGCTGAACGCTGCTTTGGATGCCGAATTGCGTCAGCATGAGATGAGAAAATGGAAGGAAGATA ACCGAGAGGCCATTGAGGCGCTGAACCGTTTTCATGATGAACATGGCTGTTTCAGTGACGAATACAGGACGTTTTAG
Upstream 100 bases:
>100_bases ACGCGTGGAGCACATTTGAATGGGCTAACACCGCTCCCTGGTGTTACTATCCGTTCAATAAGCCGTGTTGCTTGCACGAA GGCTATTGTGGGAGGTACTG
Downstream 100 bases:
>100_bases CGATGCAATTTACGGTATACGCAAATACAGGGAAAAGTACTGTTTACCCGCTGCTGCTTGATGTGACGAGCGATATCATC GGGCAATTAAATCGTCGAGT
Product: post-segregation antitoxin CcdA
Products: NA
Alternate protein names: Post-Segregation Antitoxin CcdA; Antitoxin Of Gyrase Inhibiting xin-Antitoxin System; Protein CcdA; CcdB Antidote CcdA; Antitoxin Of Gyrase; Antitoxin Protein LetA; Gyrase Inhibitor Antitoxin
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MPVKQRTTQSVTMTVERSLLSRAREAGINLSATLNAALDAELRQHEMRKWKEDNREAIEALNRFHDEHGCFSDEYRTF
Sequences:
>Translated_78_residues MPVKQRTTQSVTMTVERSLLSRAREAGINLSATLNAALDAELRQHEMRKWKEDNREAIEALNRFHDEHGCFSDEYRTF >Mature_77_residues PVKQRTTQSVTMTVERSLLSRAREAGINLSATLNAALDAELRQHEMRKWKEDNREAIEALNRFHDEHGCFSDEYRTF
Specific function: Unknown
COG id: COG5302
COG function: function code R; Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9108; Mature: 8977
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVKQRTTQSVTMTVERSLLSRAREAGINLSATLNAALDAELRQHEMRKWKEDNREAIEA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LNRFHDEHGCFSDEYRTF HHHHHHHCCCCCCCCCCC >Mature Secondary Structure PVKQRTTQSVTMTVERSLLSRAREAGINLSATLNAALDAELRQHEMRKWKEDNREAIEA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LNRFHDEHGCFSDEYRTF HHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA