Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

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The map label for this gene is ccdB [C]

Identifier: 157369798

GI number: 157369798

Start: 1695039

End: 1695353

Strand: Direct

Name: ccdB [C]

Synonym: Spro_1555

Alternate gene names: 157369798

Gene position: 1695039-1695353 (Clockwise)

Preceding gene: 157369797

Following gene: 157369802

Centisome position: 31.11

GC content: 48.89

Gene sequence:

>315_bases
ATGCAATTTACGGTATACGCAAATACAGGGAAAAGTACTGTTTACCCGCTGCTGCTTGATGTGACGAGCGATATCATCGG
GCAATTAAATCGTCGAGTCGTGATCCCGTTATTGCCCATTGAAAAGTTTCCGGGTAGCACTCGCCCGGAACGTTTGATCC
CTTTGGTCAGGCTGGTGGATGACAAGGAGTACGCCGTTATGACACATGAGATGGCAAGTATTCCCGTTCGGGCCTTGGGT
GCTGAATTTTGCGATGCTACCCAATACCGGACCGAGGTTAAAGCCGCAATAGATTTTCTTCTCGACGGTATCTGA

Upstream 100 bases:

>100_bases
TGAGAAAATGGAAGGAAGATAACCGAGAGGCCATTGAGGCGCTGAACCGTTTTCATGATGAACATGGCTGTTTCAGTGAC
GAATACAGGACGTTTTAGCG

Downstream 100 bases:

>100_bases
TTAAATCCGGGCGGGGTAACCGCCCGGATTTATCGATCAGCGGAACAGATGTTCGGCGTGGAAGCGCAGGTGGTCTTCGA
TAAAGCTGGCGATGGTGAAG

Product: CcdB protein

Products: protein histidine; sugar phosphate [C]

Alternate protein names: Xin Of Gyrase Inhibiting Toxin-Antitoxin System; CcdB Protein; Cytotoxic Protein; CcdB-Like xin Protein; DNA Gyrase Inhibitor

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MQFTVYANTGKSTVYPLLLDVTSDIIGQLNRRVVIPLLPIEKFPGSTRPERLIPLVRLVDDKEYAVMTHEMASIPVRALG
AEFCDATQYRTEVKAAIDFLLDGI

Sequences:

>Translated_104_residues
MQFTVYANTGKSTVYPLLLDVTSDIIGQLNRRVVIPLLPIEKFPGSTRPERLIPLVRLVDDKEYAVMTHEMASIPVRALG
AEFCDATQYRTEVKAAIDFLLDGI
>Mature_104_residues
MQFTVYANTGKSTVYPLLLDVTSDIIGQLNRRVVIPLLPIEKFPGSTRPERLIPLVRLVDDKEYAVMTHEMASIPVRALG
AEFCDATQYRTEVKAAIDFLLDGI

Specific function: Killing Of Plasmid-Free Segregants. Interferes With The Activity Of DNA Gyrase. Acts To Inhibit Partitioning Of The Chromosomal DNA. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11638; Mature: 11638

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFTVYANTGKSTVYPLLLDVTSDIIGQLNRRVVIPLLPIEKFPGSTRPERLIPLVRLVD
CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHC
DKEYAVMTHEMASIPVRALGAEFCDATQYRTEVKAAIDFLLDGI
CCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQFTVYANTGKSTVYPLLLDVTSDIIGQLNRRVVIPLLPIEKFPGSTRPERLIPLVRLVD
CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHC
DKEYAVMTHEMASIPVRALGAEFCDATQYRTEVKAAIDFLLDGI
CCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Protein N-phosphohistidine; sugar [C]

Specific reaction: Protein N-phosphohistidine + sugar = protein histidine + sugar phosphate [C]

General reaction: Acts to inhibit partitioning of the chromosomal DNA [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA