| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is dld [H]
Identifier: 157369607
GI number: 157369607
Start: 1492785
End: 1494485
Strand: Reverse
Name: dld [H]
Synonym: Spro_1364
Alternate gene names: 157369607
Gene position: 1494485-1492785 (Counterclockwise)
Preceding gene: 157369608
Following gene: 157369605
Centisome position: 27.43
GC content: 58.08
Gene sequence:
>1701_bases ATGACGCAGTCCAACCAGGCATTCCTCAATCAGTTGAAAAGCATCGTCGGCGGCCCACAGTTGCTGACCGGCGAACGCAG CACCGAACGCTACCGCAAAGGCTTCCGCTCCGGCGTTGGCCAGGCACTGGCGGTGGTGTTTCCGACCAGCCTGTTGCAGC TCTGGCAACTGCTGGAGGCCTGCGTCGCTGCTGACAAAATTGTCATCATGCAGGCGGCCAACACCGGCCTGACCGAAGGC TCAACCCCCAGCGGCAACGACTATGACCGCGATGTCGTCATTATCAGCACCCTGCGACTCAACCACGTGCAGGTGCTGGA TAACGGTAAACAGGTGGTCGGTTTCCCCGGCAGCACCCTCAATCAGCTGGAAAAATTGCTCAAACCTTATGGCCGCGAGC CGCATTCGGTAATCGGTTCCTCCTGTATCGGTGCGTCGGTGATCGGTGGCGTGTGTAATAACTCCGGCGGTTCGCTGGTC AAGCGCGGCCCGGCCTACACCGAGATGGCACTGTACGCCCAGTTGGGGGAAGACGGCCAACTGCGGCTGGTAAACCATTT GGGGATTAACCTCGGCGATACACCGGAGGAAATCCTCACTCGCTTAGAGAAAGGCGATTACCGGCCGGAGGATGTCGAGC ACGGCGAACTGCGTGCTTCCGATAACGAATATGCCAGCCGGGTGCGCGACGTCGATGCCGATACGCCTTCCCGGTTTAAT GCCGACAAGCGCCGCCTGTACGAGGCCTCCGGCTGTGCCGGCAAGCTGGCGGTGTTTGCGGTACGGTTGGACACCTTCGA GAAAGAAGGCAAGGAACAGGTATTTTATATCGGTACCAACGATACCGCCGTGTTGACCGAACTGCGCCGCCATATGCTGA GCCAGTTCGACAACCTGCCGGTGGCCGGTGAGTATATGCACCGGGATATTTTTGATATTGCCGAAGTGTACGGCAAAGAT ACCTTTATGATGATCGACAAGCTCGGCACCGACCAGATGCCAAGCTTCTTCACCCTGAAAGGCCGTATGGATGCCAGCCT TAACAAGCTGCCATTACTGCCGCACAACCTGACCGACCGGCTGATGCAAGGCCTGAGCCATCTGGCCCCCAGCCACCTGC CGAAACGGATGAAAGACTACCGCGAACGCTTTGAACATCACCTGCTGCTGAAAATGGCCGGTCCGGGCGTTGAAGAAGCG CAGCAGTACCTGAAACAGTACTTTGCCCAGGCCAACGGCGAGTTTTTCACCTGCACCCCGGACGAGGGCAAGAAAGCCTT CCTGCACCGCTTTGCCGCCGCCGGTGCCGCCGTGCGTTACCATGCGGTGCATGCCGACAAGGTAGAAGATATTCTGGCGT TGGATATCGCGTTGCGCCGTAACGACACCGACTGGTTCGAAACCCTGCCGCCAGAAATCGACAGCCAACTGGTGCACAAG CTGTATTACGGCCACTTTATGTGCCACGTATTCCATCAGGATTATGTGGTGAAAAAAGGCGTCGACAGCCACGCATTGAA AGAGAAAATGCTGGCGATCCTCGACCAGCGCGGCGCGGAGTACCCGGCGGAACATAACGTCGGCCACCTGTACCCGGCCA AGCCCGATCTGCAGGCGTTCTACCGCAGCGCCGACCCGACCAACAGCTTTAATCCGGGCCTAGGTAAAACCAGCAAGCGG AAAAACTGGGCCGACAATTAA
Upstream 100 bases:
>100_bases CATCCCCAGGCGCTTACTCGAGTAAGTAACTGGGGTGAGCGAGTGCAGATAACAACGCTGCAGCTTGAAAGATGACGGGT ATATTCGAAGGGAGATCGGC
Downstream 100 bases:
>100_bases TTTCGTCAGGCCTAAAAAGCAAAAGCCCCCCACGCCAGAGCGGCGTGAGGGGCAATATCAAAACAGAGTTTAGAATAACC AGGAACCATACCCCCACAGC
Product: D-lactate dehydrogenase
Products: NA
Alternate protein names: Respiratory D-lactate dehydrogenase [H]
Number of amino acids: Translated: 566; Mature: 565
Protein sequence:
>566_residues MTQSNQAFLNQLKSIVGGPQLLTGERSTERYRKGFRSGVGQALAVVFPTSLLQLWQLLEACVAADKIVIMQAANTGLTEG STPSGNDYDRDVVIISTLRLNHVQVLDNGKQVVGFPGSTLNQLEKLLKPYGREPHSVIGSSCIGASVIGGVCNNSGGSLV KRGPAYTEMALYAQLGEDGQLRLVNHLGINLGDTPEEILTRLEKGDYRPEDVEHGELRASDNEYASRVRDVDADTPSRFN ADKRRLYEASGCAGKLAVFAVRLDTFEKEGKEQVFYIGTNDTAVLTELRRHMLSQFDNLPVAGEYMHRDIFDIAEVYGKD TFMMIDKLGTDQMPSFFTLKGRMDASLNKLPLLPHNLTDRLMQGLSHLAPSHLPKRMKDYRERFEHHLLLKMAGPGVEEA QQYLKQYFAQANGEFFTCTPDEGKKAFLHRFAAAGAAVRYHAVHADKVEDILALDIALRRNDTDWFETLPPEIDSQLVHK LYYGHFMCHVFHQDYVVKKGVDSHALKEKMLAILDQRGAEYPAEHNVGHLYPAKPDLQAFYRSADPTNSFNPGLGKTSKR KNWADN
Sequences:
>Translated_566_residues MTQSNQAFLNQLKSIVGGPQLLTGERSTERYRKGFRSGVGQALAVVFPTSLLQLWQLLEACVAADKIVIMQAANTGLTEG STPSGNDYDRDVVIISTLRLNHVQVLDNGKQVVGFPGSTLNQLEKLLKPYGREPHSVIGSSCIGASVIGGVCNNSGGSLV KRGPAYTEMALYAQLGEDGQLRLVNHLGINLGDTPEEILTRLEKGDYRPEDVEHGELRASDNEYASRVRDVDADTPSRFN ADKRRLYEASGCAGKLAVFAVRLDTFEKEGKEQVFYIGTNDTAVLTELRRHMLSQFDNLPVAGEYMHRDIFDIAEVYGKD TFMMIDKLGTDQMPSFFTLKGRMDASLNKLPLLPHNLTDRLMQGLSHLAPSHLPKRMKDYRERFEHHLLLKMAGPGVEEA QQYLKQYFAQANGEFFTCTPDEGKKAFLHRFAAAGAAVRYHAVHADKVEDILALDIALRRNDTDWFETLPPEIDSQLVHK LYYGHFMCHVFHQDYVVKKGVDSHALKEKMLAILDQRGAEYPAEHNVGHLYPAKPDLQAFYRSADPTNSFNPGLGKTSKR KNWADN >Mature_565_residues TQSNQAFLNQLKSIVGGPQLLTGERSTERYRKGFRSGVGQALAVVFPTSLLQLWQLLEACVAADKIVIMQAANTGLTEGS TPSGNDYDRDVVIISTLRLNHVQVLDNGKQVVGFPGSTLNQLEKLLKPYGREPHSVIGSSCIGASVIGGVCNNSGGSLVK RGPAYTEMALYAQLGEDGQLRLVNHLGINLGDTPEEILTRLEKGDYRPEDVEHGELRASDNEYASRVRDVDADTPSRFNA DKRRLYEASGCAGKLAVFAVRLDTFEKEGKEQVFYIGTNDTAVLTELRRHMLSQFDNLPVAGEYMHRDIFDIAEVYGKDT FMMIDKLGTDQMPSFFTLKGRMDASLNKLPLLPHNLTDRLMQGLSHLAPSHLPKRMKDYRERFEHHLLLKMAGPGVEEAQ QYLKQYFAQANGEFFTCTPDEGKKAFLHRFAAAGAAVRYHAVHADKVEDILALDIALRRNDTDWFETLPPEIDSQLVHKL YYGHFMCHVFHQDYVVKKGVDSHALKEKMLAILDQRGAEYPAEHNVGHLYPAKPDLQAFYRSADPTNSFNPGLGKTSKRK NWADN
Specific function: First component of the membrane-bound D-lactate oxidase, which is believed to play an important role in the energization of the active transport of a variety of sugars and amino acids [H]
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1788454, Length=564, Percent_Identity=71.6312056737589, Blast_Score=855, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016172 - InterPro: IPR016173 - InterPro: IPR012256 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR016164 - InterPro: IPR016168 - InterPro: IPR015409 - InterPro: IPR006094 [H]
Pfam domain/function: PF01565 FAD_binding_4; PF09330 Lact-deh-memb [H]
EC number: =1.1.1.28 [H]
Molecular weight: Translated: 63215; Mature: 63084
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSNQAFLNQLKSIVGGPQLLTGERSTERYRKGFRSGVGQALAVVFPTSLLQLWQLLEA CCCCHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CVAADKIVIMQAANTGLTEGSTPSGNDYDRDVVIISTLRLNHVQVLDNGKQVVGFPGSTL HHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCEEEECCCHHH NQLEKLLKPYGREPHSVIGSSCIGASVIGGVCNNSGGSLVKRGPAYTEMALYAQLGEDGQ HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHCCCCCC LRLVNHLGINLGDTPEEILTRLEKGDYRPEDVEHGELRASDNEYASRVRDVDADTPSRFN EEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC ADKRRLYEASGCAGKLAVFAVRLDTFEKEGKEQVFYIGTNDTAVLTELRRHMLSQFDNLP HHHHHHHHHCCCCCCHHHEEEHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCC VAGEYMHRDIFDIAEVYGKDTFMMIDKLGTDQMPSFFTLKGRMDASLNKLPLLPHNLTDR CCHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHH LMQGLSHLAPSHLPKRMKDYRERFEHHLLLKMAGPGVEEAQQYLKQYFAQANGEFFTCTP HHHHHHHHCHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECC DEGKKAFLHRFAAAGAAVRYHAVHADKVEDILALDIALRRNDTDWFETLPPEIDSQLVHK CCHHHHHHHHHHHHCHHHEEEEHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHH LYYGHFMCHVFHQDYVVKKGVDSHALKEKMLAILDQRGAEYPAEHNVGHLYPAKPDLQAF HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH YRSADPTNSFNPGLGKTSKRKNWADN HHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQSNQAFLNQLKSIVGGPQLLTGERSTERYRKGFRSGVGQALAVVFPTSLLQLWQLLEA CCCHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CVAADKIVIMQAANTGLTEGSTPSGNDYDRDVVIISTLRLNHVQVLDNGKQVVGFPGSTL HHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCEEEECCCHHH NQLEKLLKPYGREPHSVIGSSCIGASVIGGVCNNSGGSLVKRGPAYTEMALYAQLGEDGQ HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHCCCCCC LRLVNHLGINLGDTPEEILTRLEKGDYRPEDVEHGELRASDNEYASRVRDVDADTPSRFN EEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC ADKRRLYEASGCAGKLAVFAVRLDTFEKEGKEQVFYIGTNDTAVLTELRRHMLSQFDNLP HHHHHHHHHCCCCCCHHHEEEHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCC VAGEYMHRDIFDIAEVYGKDTFMMIDKLGTDQMPSFFTLKGRMDASLNKLPLLPHNLTDR CCHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHH LMQGLSHLAPSHLPKRMKDYRERFEHHLLLKMAGPGVEEAQQYLKQYFAQANGEFFTCTP HHHHHHHHCHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECC DEGKKAFLHRFAAAGAAVRYHAVHADKVEDILALDIALRRNDTDWFETLPPEIDSQLVHK CCHHHHHHHHHHHHCHHHEEEEHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHH LYYGHFMCHVFHQDYVVKKGVDSHALKEKMLAILDQRGAEYPAEHNVGHLYPAKPDLQAF HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH YRSADPTNSFNPGLGKTSKRKNWADN HHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 6386470; 3882663; 9278503; 10944213 [H]