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The map label for this gene is ybeD [C]

Identifier: 157369440

GI number: 157369440

Start: 1313533

End: 1313796

Strand: Reverse

Name: ybeD [C]

Synonym: Spro_1197

Alternate gene names: 157369440

Gene position: 1313796-1313533 (Counterclockwise)

Preceding gene: 157369441

Following gene: 157369439

Centisome position: 24.11

GC content: 48.86

Gene sequence:

>264_bases
ATGAAAACTAAACTGAACGAACTGCTCGAATTCCCTTGCTCATTTACCTACAAAGTAATGGGTCTGGCACAACCCGAGCT
GGTGGACCAGGTGGTTGAAGTGGTGCAGCGCCATGCTCCCGGGGATTACAACCCACAGGTTAAACCTAGCAGCAAAGGCA
ATTACCACTCCGTGTCCATCACCATCACCGCCACCCATATCGATCAGGTGGAAACCTTATATGATGAGTTGGGCAACATT
GAAATTGTCCGCATGGTTCTGTAA

Upstream 100 bases:

>100_bases
GGCGAAATCGCCCCCATATACTGATTAACATTAACTCCCGCTCCGGCGGGAGTTATAATTTATAGAATCGCTATACCGAT
AGCCGCACTCTGGAGCGCAC

Downstream 100 bases:

>100_bases
TTACAGCACAAAACCCTGCTTTTCAGCCCGGGCCAGAGCATCCTCTGCCCGGGTTGCGCATTTTTGGTCAGCGAAATGCT
GGCCGCGGGCCAGAGCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKTKLNELLEFPCSFTYKVMGLAQPELVDQVVEVVQRHAPGDYNPQVKPSSKGNYHSVSITITATHIDQVETLYDELGNI
EIVRMVL

Sequences:

>Translated_87_residues
MKTKLNELLEFPCSFTYKVMGLAQPELVDQVVEVVQRHAPGDYNPQVKPSSKGNYHSVSITITATHIDQVETLYDELGNI
EIVRMVL
>Mature_87_residues
MKTKLNELLEFPCSFTYKVMGLAQPELVDQVVEVVQRHAPGDYNPQVKPSSKGNYHSVSITITATHIDQVETLYDELGNI
EIVRMVL

Specific function: Unknown

COG id: COG2921

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0250 family [H]

Homologues:

Organism=Escherichia coli, GI1786850, Length=87, Percent_Identity=87.3563218390805, Blast_Score=156, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007454 [H]

Pfam domain/function: PF04359 DUF493 [H]

EC number: NA

Molecular weight: Translated: 9818; Mature: 9818

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKLNELLEFPCSFTYKVMGLAQPELVDQVVEVVQRHAPGDYNPQVKPSSKGNYHSVSI
CCCCHHHHHHCCCCCEEHEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
TITATHIDQVETLYDELGNIEIVRMVL
EEEECCHHHHHHHHHHHCCEEEEEEEC
>Mature Secondary Structure
MKTKLNELLEFPCSFTYKVMGLAQPELVDQVVEVVQRHAPGDYNPQVKPSSKGNYHSVSI
CCCCHHHHHHCCCCCEEHEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
TITATHIDQVETLYDELGNIEIVRMVL
EEEECCHHHHHHHHHHHCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA