| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is aqpZ [H]
Identifier: 157369252
GI number: 157369252
Start: 1109619
End: 1110314
Strand: Reverse
Name: aqpZ [H]
Synonym: Spro_1009
Alternate gene names: 157369252
Gene position: 1110314-1109619 (Counterclockwise)
Preceding gene: 157369254
Following gene: 157369250
Centisome position: 20.38
GC content: 52.87
Gene sequence:
>696_bases ATGTCAAAGCGACTTTTTGCCGAATTTTTTGGCACATTTTGGTTGGTGTTCGGTGGTTGTGGTAGCGCAGTATTAGCAGC AGCATTTCCACAGCTGGGTATTGGTTTTCTTGGTGTCGCGCTCGCTTTTGGTTTGACCGTGGTCACCATGGCTTATGCCG TTGGCCATATTTCTGGCGGGCACTTTAACCCGGCGATTACCGTGGGGTTGTTTGCCGGCGGCCGTTTCGCCGCTAAAGAC GTGATCCCCTATGTGATTGCTCAGGTTATTGGCGGGATTGCTGCAGCGGCGGTGTTGTATTTGATCGCCAGCGGCAAGGC AGGTTTTGACGCTACCGGCGGCGGCTTTGCCTCCAACGGTTACGGTGAACACTCACCGGGCGGCTATTCTCTGCAGTCCG CAATCGTAATCGAATTGGTCCTGACCGCATTCTTCCTGATCGTTATTCATGGTGTCACAGATAAACGTGCGCCTGCGGGC TTTGCTCCATTGGCCATTGGTTTGACGTTAACCCTGATTCACCTGATCAGTATTCCGGTTACCAATACTTCCGTTAACCC GGCGCGTAGTACCGGCGTAGCAATATTCCAGGGAACCTGGGCATTGCAACAACTATGGGTATTCTGGCTGGTGCCATTAG TGGGCGGTGTTATCGGCGGCCTGATTTATCGCTGCCTGCTGGAAGACAAGAAGTAA
Upstream 100 bases:
>100_bases TCATTAAGAATAATCCTGATAGAAACCTGCATTAATTGAAAAAGGTGTTCTATAGTTTTTAGTGCTAACGCCCGTTAGTA TTTTCCGTAGGATGGAGTCT
Downstream 100 bases:
>100_bases TTTCTTTCCTGGCAGTATTCTGTCAGGGCAGCCGCTATATCCCGCGTGTTTCCGCTTGCCATCGGGAAAATGAAGGGTAT ATCGGCTGCCCTGAATTATT
Product: aquaporin Z
Products: H2O [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSKRLFAEFFGTFWLVFGGCGSAVLAAAFPQLGIGFLGVALAFGLTVVTMAYAVGHISGGHFNPAITVGLFAGGRFAAKD VIPYVIAQVIGGIAAAAVLYLIASGKAGFDATGGGFASNGYGEHSPGGYSLQSAIVIELVLTAFFLIVIHGVTDKRAPAG FAPLAIGLTLTLIHLISIPVTNTSVNPARSTGVAIFQGTWALQQLWVFWLVPLVGGVIGGLIYRCLLEDKK
Sequences:
>Translated_231_residues MSKRLFAEFFGTFWLVFGGCGSAVLAAAFPQLGIGFLGVALAFGLTVVTMAYAVGHISGGHFNPAITVGLFAGGRFAAKD VIPYVIAQVIGGIAAAAVLYLIASGKAGFDATGGGFASNGYGEHSPGGYSLQSAIVIELVLTAFFLIVIHGVTDKRAPAG FAPLAIGLTLTLIHLISIPVTNTSVNPARSTGVAIFQGTWALQQLWVFWLVPLVGGVIGGLIYRCLLEDKK >Mature_230_residues SKRLFAEFFGTFWLVFGGCGSAVLAAAFPQLGIGFLGVALAFGLTVVTMAYAVGHISGGHFNPAITVGLFAGGRFAAKDV IPYVIAQVIGGIAAAAVLYLIASGKAGFDATGGGFASNGYGEHSPGGYSLQSAIVIELVLTAFFLIVIHGVTDKRAPAGF APLAIGLTLTLIHLISIPVTNTSVNPARSTGVAIFQGTWALQQLWVFWLVPLVGGVIGGLIYRCLLEDKK
Specific function: Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response
COG id: COG0580
COG function: function code G; Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP/aquaporin (TC 1.A.8) family [H]
Homologues:
Organism=Homo sapiens, GI4502183, Length=227, Percent_Identity=40.0881057268723, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI4502179, Length=228, Percent_Identity=37.719298245614, Blast_Score=127, Evalue=9e-30, Organism=Homo sapiens, GI37694062, Length=242, Percent_Identity=36.7768595041322, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI6912506, Length=227, Percent_Identity=37.0044052863436, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI4755125, Length=225, Percent_Identity=31.1111111111111, Blast_Score=104, Evalue=8e-23, Organism=Homo sapiens, GI4502181, Length=225, Percent_Identity=31.1111111111111, Blast_Score=104, Evalue=8e-23, Organism=Homo sapiens, GI86792455, Length=232, Percent_Identity=33.6206896551724, Blast_Score=98, Evalue=5e-21, Organism=Homo sapiens, GI157266307, Length=252, Percent_Identity=32.1428571428571, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI45446752, Length=225, Percent_Identity=31.1111111111111, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI4502187, Length=246, Percent_Identity=29.6747967479675, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI22538420, Length=251, Percent_Identity=25.0996015936255, Blast_Score=68, Evalue=6e-12, Organism=Escherichia coli, GI1787101, Length=231, Percent_Identity=80.0865800865801, Blast_Score=343, Evalue=5e-96, Organism=Escherichia coli, GI1790362, Length=267, Percent_Identity=27.7153558052434, Blast_Score=79, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71993722, Length=235, Percent_Identity=31.9148936170213, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI71992966, Length=235, Percent_Identity=29.3617021276596, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71994009, Length=242, Percent_Identity=28.5123966942149, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17558372, Length=229, Percent_Identity=28.3842794759825, Blast_Score=68, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17531431, Length=239, Percent_Identity=28.0334728033473, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17531429, Length=239, Percent_Identity=28.0334728033473, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24652747, Length=231, Percent_Identity=36.7965367965368, Blast_Score=136, Evalue=1e-32, Organism=Drosophila melanogaster, GI45551084, Length=231, Percent_Identity=36.7965367965368, Blast_Score=136, Evalue=1e-32, Organism=Drosophila melanogaster, GI24652751, Length=230, Percent_Identity=36.5217391304348, Blast_Score=103, Evalue=8e-23, Organism=Drosophila melanogaster, GI19922038, Length=232, Percent_Identity=36.2068965517241, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI17136672, Length=235, Percent_Identity=28.936170212766, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI24762342, Length=227, Percent_Identity=29.9559471365639, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI45550503, Length=231, Percent_Identity=25.5411255411255, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24762344, Length=225, Percent_Identity=28, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24762346, Length=225, Percent_Identity=28, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24762348, Length=225, Percent_Identity=28, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI20130305, Length=225, Percent_Identity=28, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012269 - InterPro: IPR000425 - InterPro: IPR022357 [H]
Pfam domain/function: PF00230 MIP [H]
EC number: NA
Molecular weight: Translated: 23860; Mature: 23729
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00221 MIP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRLFAEFFGTFWLVFGGCGSAVLAAAFPQLGIGFLGVALAFGLTVVTMAYAVGHISGG CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HFNPAITVGLFAGGRFAAKDVIPYVIAQVIGGIAAAAVLYLIASGKAGFDATGGGFASNG CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC YGEHSPGGYSLQSAIVIELVLTAFFLIVIHGVTDKRAPAGFAPLAIGLTLTLIHLISIPV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC TNTSVNPARSTGVAIFQGTWALQQLWVFWLVPLVGGVIGGLIYRCLLEDKK CCCCCCCCHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SKRLFAEFFGTFWLVFGGCGSAVLAAAFPQLGIGFLGVALAFGLTVVTMAYAVGHISGG CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HFNPAITVGLFAGGRFAAKDVIPYVIAQVIGGIAAAAVLYLIASGKAGFDATGGGFASNG CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC YGEHSPGGYSLQSAIVIELVLTAFFLIVIHGVTDKRAPAGFAPLAIGLTLTLIHLISIPV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC TNTSVNPARSTGVAIFQGTWALQQLWVFWLVPLVGGVIGGLIYRCLLEDKK CCCCCCCCHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O [Periplasm] [C]
Specific reaction: H2O [Periplasm] = H2O [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]