| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157369254
Identifier: 157369254
GI number: 157369254
Start: 1112389
End: 1113570
Strand: Reverse
Name: 157369254
Synonym: Spro_1011
Alternate gene names: NA
Gene position: 1113570-1112389 (Counterclockwise)
Preceding gene: 157369257
Following gene: 157369252
Centisome position: 20.44
GC content: 56.26
Gene sequence:
>1182_bases ATGTCACAAACCTTACTACGTGTACGCGATGGCCATGGGGCCTCGGTTTCGTTCTCGGAACTATTGTTCGATCTGATCTA CGTTTTTGCCGTTACCCAACTTTCCCACTATCTGCTGCATCATCTGACGTTAACCGGTGCGCTGGAAACCCTGTTGTTAT GGTTCGCCGTCTGGTTGGCGTGGCAATACACGGCCTGGGTCACTAACTGGTTTAACCCGGATACTCGCCCGATTCGCATC CTGCTGTTCGCCATCATGCTGTTGGGGTTGTTCGCCTCATCCGCGCTGCCGCAGGCATTTGGTGAACGAGGACTGACGTT CGCACTATTTTACGTGGCAATCCAGGTTGGCCGTTCACTGGTAGTCCTGAATCTGTTACCGGCCCACCATCCGCTAAAAC AAAACTTCCAGCGCATTCTCGGCTGGATGTGCATCTCGGCGATTTTCTGGATCCTCGGTGGCCTGACGGAGGGCAACCAT CGACTGCTGCTGTGGGCCGTGGCGGTCCTGTGTGAATACGTTTCGCCGATGTTCGGTTTCCGCTTACCGGTGCTTGGCCG TTCCGACAGCAGCAGCGAATGGACGATTGAAGGCCATCACCTGGCAGAGCGCTGCCAACTGTTTGTCATTGTGGCACTGG GGGAAACCATTCTGATCACCGGTTCCACCCTCAGCGAAATGGAGTCCTGGACAGCGCCGGTGCTGATTGCGTCACTGGTG GCCTTTCTCGGCAGTCTGGCGATGTGGTGGGTTTATTTCGATACCAGCAGCAAAGCCGGCAGCCATGCCATCAGTCAGGC AGCAAACCCTGGCCAGTTGGGTGCCTATTTCCATTATGTCCATGTGGTACTGGTGGGCGCGATCATCGTCTGCGCCGTCG CCAATGAACTGGTGATCGCCCACCCTGACGGCCACATCAATAACGTGACGGCAGCGGTGCTACTGCTGGGCCCGGCAATT TATCTGCTCGCCAATGCGCTGTACAAGAGACTGGTGTATCGCCGTTTCCCGCTGTCGCACTTACTGGGGCTGATCGCGCT GGCGGTGCTGGCACCGATTGCCTATCTCACCGATTTATTGATGGTGAACGGCCTGACCACGCTGATTATGGTGGCCGTGG CGGTATGGGAAAGCATCTCGCGTGGCAAAGTGTCACAGGCTAACCGCGACGCTATCATATAA
Upstream 100 bases:
>100_bases TCAATCAAAAGATAAAAACCTCACTTTTAAGATTTCTCTCCCACCCGCAGGTGGCTGAACTACGCTATTGCTGAAGGTTA CCATTTTGGAAGGACTCTCT
Downstream 100 bases:
>100_bases GGAAAGAAGCAGGGGGCCATGCCCCTGTGAGTTTGATGGCAAAGTTGTCTTTGAATCCGAGATACCCGGGCCTAGCGCAC CGAGGGGCCATTATGGGACA
Product: low temperature requirement A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MSQTLLRVRDGHGASVSFSELLFDLIYVFAVTQLSHYLLHHLTLTGALETLLLWFAVWLAWQYTAWVTNWFNPDTRPIRI LLFAIMLLGLFASSALPQAFGERGLTFALFYVAIQVGRSLVVLNLLPAHHPLKQNFQRILGWMCISAIFWILGGLTEGNH RLLLWAVAVLCEYVSPMFGFRLPVLGRSDSSSEWTIEGHHLAERCQLFVIVALGETILITGSTLSEMESWTAPVLIASLV AFLGSLAMWWVYFDTSSKAGSHAISQAANPGQLGAYFHYVHVVLVGAIIVCAVANELVIAHPDGHINNVTAAVLLLGPAI YLLANALYKRLVYRRFPLSHLLGLIALAVLAPIAYLTDLLMVNGLTTLIMVAVAVWESISRGKVSQANRDAII
Sequences:
>Translated_393_residues MSQTLLRVRDGHGASVSFSELLFDLIYVFAVTQLSHYLLHHLTLTGALETLLLWFAVWLAWQYTAWVTNWFNPDTRPIRI LLFAIMLLGLFASSALPQAFGERGLTFALFYVAIQVGRSLVVLNLLPAHHPLKQNFQRILGWMCISAIFWILGGLTEGNH RLLLWAVAVLCEYVSPMFGFRLPVLGRSDSSSEWTIEGHHLAERCQLFVIVALGETILITGSTLSEMESWTAPVLIASLV AFLGSLAMWWVYFDTSSKAGSHAISQAANPGQLGAYFHYVHVVLVGAIIVCAVANELVIAHPDGHINNVTAAVLLLGPAI YLLANALYKRLVYRRFPLSHLLGLIALAVLAPIAYLTDLLMVNGLTTLIMVAVAVWESISRGKVSQANRDAII >Mature_392_residues SQTLLRVRDGHGASVSFSELLFDLIYVFAVTQLSHYLLHHLTLTGALETLLLWFAVWLAWQYTAWVTNWFNPDTRPIRIL LFAIMLLGLFASSALPQAFGERGLTFALFYVAIQVGRSLVVLNLLPAHHPLKQNFQRILGWMCISAIFWILGGLTEGNHR LLLWAVAVLCEYVSPMFGFRLPVLGRSDSSSEWTIEGHHLAERCQLFVIVALGETILITGSTLSEMESWTAPVLIASLVA FLGSLAMWWVYFDTSSKAGSHAISQAANPGQLGAYFHYVHVVLVGAIIVCAVANELVIAHPDGHINNVTAAVLLLGPAIY LLANALYKRLVYRRFPLSHLLGLIALAVLAPIAYLTDLLMVNGLTTLIMVAVAVWESISRGKVSQANRDAII
Specific function: Unknown
COG id: COG4292
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010640 [H]
Pfam domain/function: PF06772 LtrA [H]
EC number: NA
Molecular weight: Translated: 43343; Mature: 43211
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTLLRVRDGHGASVSFSELLFDLIYVFAVTQLSHYLLHHLTLTGALETLLLWFAVWLA CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQYTAWVTNWFNPDTRPIRILLFAIMLLGLFASSALPQAFGERGLTFALFYVAIQVGRSL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCHH VVLNLLPAHHPLKQNFQRILGWMCISAIFWILGGLTEGNHRLLLWAVAVLCEYVSPMFGF EEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC RLPVLGRSDSSSEWTIEGHHLAERCQLFVIVALGETILITGSTLSEMESWTAPVLIASLV CCCCCCCCCCCCCEEEEHHHHHHHHHEEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHH AFLGSLAMWWVYFDTSSKAGSHAISQAANPGQLGAYFHYVHVVLVGAIIVCAVANELVIA HHHHHHHHHHHEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEE HPDGHINNVTAAVLLLGPAIYLLANALYKRLVYRRFPLSHLLGLIALAVLAPIAYLTDLL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH MVNGLTTLIMVAVAVWESISRGKVSQANRDAII HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SQTLLRVRDGHGASVSFSELLFDLIYVFAVTQLSHYLLHHLTLTGALETLLLWFAVWLA CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQYTAWVTNWFNPDTRPIRILLFAIMLLGLFASSALPQAFGERGLTFALFYVAIQVGRSL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCHH VVLNLLPAHHPLKQNFQRILGWMCISAIFWILGGLTEGNHRLLLWAVAVLCEYVSPMFGF EEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC RLPVLGRSDSSSEWTIEGHHLAERCQLFVIVALGETILITGSTLSEMESWTAPVLIASLV CCCCCCCCCCCCCEEEEHHHHHHHHHEEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHH AFLGSLAMWWVYFDTSSKAGSHAISQAANPGQLGAYFHYVHVVLVGAIIVCAVANELVIA HHHHHHHHHHHEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEE HPDGHINNVTAAVLLLGPAIYLLANALYKRLVYRRFPLSHLLGLIALAVLAPIAYLTDLL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH MVNGLTTLIMVAVAVWESISRGKVSQANRDAII HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9204561; 11481432 [H]