| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157369250
Identifier: 157369250
GI number: 157369250
Start: 1107846
End: 1108700
Strand: Reverse
Name: 157369250
Synonym: Spro_1007
Alternate gene names: NA
Gene position: 1108700-1107846 (Counterclockwise)
Preceding gene: 157369252
Following gene: 157369249
Centisome position: 20.35
GC content: 57.31
Gene sequence:
>855_bases ATGACTATAATTGGCTTATTATACGGGTACAATATAAGCAGTTATCCTAGTATCAGGAGGTACCAGTCTATGCAATCAGA AGCCTTATCCGGCCCTAAAGCCCTGGGGGCCTTCCTGCGTGCGCACCGGGAACGCATCACACCGGAAATGTTGGGTTTAC CCAGCGCCCCACGCCGTCGCACCAGCGGCCTGCGCCGTGAAGAGCTGGCACAAATCAGCGGTATCAGCGCCACCTGGTAT ACCTGGATCGAGCAGGGGCGTGAAGTTTCCATATCCCCCCATACGCTGGCACGCATTGCCAAAGCGCTACGGTTGGGAGC AGCCGAACGTCACTACCTGTTTACCCTGGCTCGGGTAGCCGATCCCGAACAGGAGCAGCATCAGGAAACGGCGAATAGCG CCGTGTTGCAAAGCGTTCACCAGGTAACGGGGCCTTGCTACCTGCTGGATATCACCTGGAATGTCGTTGCCTGGAACCCG CAGGCGGAAAGCCTGTTCAGCGGTTGGCTGGGCCAGGCCGCCACCCCCAACCTGTTGCACTTTATGTTCTTCCATCCGTT GGCCAAAACCCTGGTCAGCGACTGGGATGACCGAGCGCGACGCGTGGTCGCCGAGTTTCGGGCCGAAACCAGTCACCATC AGAACACGGAAGAAATGCGTGCTTTCGTGCGTAACATGACGCACAACAGTGAGGCCTTTAATCACTGGTGGAAACAGCAG GACGTGCTGGCACGAGAAGGAGGCGAGCGTGCGTTTACCCACTTGCAACAGGGGGCATTGCGCTATCGGCAACTGACGTT TAACCCGGCGGAAAATAGCGGGTTGAAGCTGGTGATGCTGATCCCTCTGCCGTAA
Upstream 100 bases:
>100_bases GCTCACCAAACTGGCGGTCGACCGCATTTTTATGGCTATTGCTGATGCTCATAGGTGCTCCCTTTATTGTATGGCTTGCG CCTGTGCCGGATGGCTTTCA
Downstream 100 bases:
>100_bases CTGGTAACAAATTCATAAACAGGTTTACCTGCCATTTATTTATTGGTTCATATAAACGCGCTAGGGTGATAGCTACCGAT GATATCCATCATCCAGTAAC
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain Protein; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family; Helix-Turn-Helix Protein; Helix-Turn-Helix Domain Containing Protein; Transcriptional Regulator Protein; XRE Family Transcription Regulator Protein
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTIIGLLYGYNISSYPSIRRYQSMQSEALSGPKALGAFLRAHRERITPEMLGLPSAPRRRTSGLRREELAQISGISATWY TWIEQGREVSISPHTLARIAKALRLGAAERHYLFTLARVADPEQEQHQETANSAVLQSVHQVTGPCYLLDITWNVVAWNP QAESLFSGWLGQAATPNLLHFMFFHPLAKTLVSDWDDRARRVVAEFRAETSHHQNTEEMRAFVRNMTHNSEAFNHWWKQQ DVLAREGGERAFTHLQQGALRYRQLTFNPAENSGLKLVMLIPLP
Sequences:
>Translated_284_residues MTIIGLLYGYNISSYPSIRRYQSMQSEALSGPKALGAFLRAHRERITPEMLGLPSAPRRRTSGLRREELAQISGISATWY TWIEQGREVSISPHTLARIAKALRLGAAERHYLFTLARVADPEQEQHQETANSAVLQSVHQVTGPCYLLDITWNVVAWNP QAESLFSGWLGQAATPNLLHFMFFHPLAKTLVSDWDDRARRVVAEFRAETSHHQNTEEMRAFVRNMTHNSEAFNHWWKQQ DVLAREGGERAFTHLQQGALRYRQLTFNPAENSGLKLVMLIPLP >Mature_283_residues TIIGLLYGYNISSYPSIRRYQSMQSEALSGPKALGAFLRAHRERITPEMLGLPSAPRRRTSGLRREELAQISGISATWYT WIEQGREVSISPHTLARIAKALRLGAAERHYLFTLARVADPEQEQHQETANSAVLQSVHQVTGPCYLLDITWNVVAWNPQ AESLFSGWLGQAATPNLLHFMFFHPLAKTLVSDWDDRARRVVAEFRAETSHHQNTEEMRAFVRNMTHNSEAFNHWWKQQD VLAREGGERAFTHLQQGALRYRQLTFNPAENSGLKLVMLIPLP
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32371; Mature: 32240
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIIGLLYGYNISSYPSIRRYQSMQSEALSGPKALGAFLRAHRERITPEMLGLPSAPRRR CEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCHH TSGLRREELAQISGISATWYTWIEQGREVSISPHTLARIAKALRLGAAERHYLFTLARVA HCCCCHHHHHHHHCCCHHHHHHHHCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHC DPEQEQHQETANSAVLQSVHQVTGPCYLLDITWNVVAWNPQAESLFSGWLGQAATPNLLH CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCHHHHHHHHHCCCCCHHHHH FMFFHPLAKTLVSDWDDRARRVVAEFRAETSHHQNTEEMRAFVRNMTHNSEAFNHWWKQQ HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHH DVLAREGGERAFTHLQQGALRYRQLTFNPAENSGLKLVMLIPLP HHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECC >Mature Secondary Structure TIIGLLYGYNISSYPSIRRYQSMQSEALSGPKALGAFLRAHRERITPEMLGLPSAPRRR EEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCHH TSGLRREELAQISGISATWYTWIEQGREVSISPHTLARIAKALRLGAAERHYLFTLARVA HCCCCHHHHHHHHCCCHHHHHHHHCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHC DPEQEQHQETANSAVLQSVHQVTGPCYLLDITWNVVAWNPQAESLFSGWLGQAATPNLLH CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCHHHHHHHHHCCCCCHHHHH FMFFHPLAKTLVSDWDDRARRVVAEFRAETSHHQNTEEMRAFVRNMTHNSEAFNHWWKQQ HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHH DVLAREGGERAFTHLQQGALRYRQLTFNPAENSGLKLVMLIPLP HHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA