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The map label for this gene is 157369249

Identifier: 157369249

GI number: 157369249

Start: 1106967

End: 1107719

Strand: Reverse

Name: 157369249

Synonym: Spro_1006

Alternate gene names: NA

Gene position: 1107719-1106967 (Counterclockwise)

Preceding gene: 157369250

Following gene: 157369248

Centisome position: 20.33

GC content: 57.1

Gene sequence:

>753_bases
ATGCAATCCGAAGAACAACGTCTTATCGATGGTCTGTTTGGCCGCTTGAAAGAAGCCGAGACCAAGACGGGCCAGAGGGA
TCTCCAGGCAGAGCAGCAAATCAACCAGCACATCCGTGAACAGCCTTCCGCGCCCTATTACATGGCGCAGGCGATGATCA
TTCAGGAAGCGGCGCTCAAACAGTTGGATCAGCGGGTGAAAGATCTGGAGGGCCAACTTGCCCAACAGCAGCAAAATAAC
GCCAGCCAGCCAAGCAGCGGCGGTTTTCTGGCCGGGCTGTTCGGCGGCGGTAACCGCAGCACGCCAAGCCCGCGCGAGCA
GTATCAGGCACAACAGCAAAATAATGCGGCGTGGAACAATCAGACACAGCCGGGCTATGCTCAGCAACAGCAGCAACCGG
CTTACAGCCAGCCACAACAGGCAGCACCTTCACGCGCCGGTGGGTTCCTTGGTGGGGCATTGCAGACCGCTGCCGGCGTG
GCAGGCGGGGTGGTATTGGCCGATATGCTGACCGGCATGTTCCGTCACTCGCAACCGCAAGAGATTGTGAACATTATCGA
CGAGACCCCGGCAACGCCGGTGGATGACAGCGCGATGAGCAATTTCGACGCCTCCAACAACCTGGACACCTTCAACGGTG
GCGATAGTCGCTTCCTCAATCAGGACAACGGTTTCCAGAACGCGGATTATCAAAACGACGATAACACCGACTTCTCTGAT
GACGACTACAGCGACGACGATTCGTTTATCTGA

Upstream 100 bases:

>100_bases
ACCTGCCATTTATTTATTGGTTCATATAAACGCGCTAGGGTGATAGCTACCGATGATATCCATCATCCAGTAACGTTATT
CATCTCCTTGAGGTAATCCT

Downstream 100 bases:

>100_bases
TGCCGCCCCCTCTCCGCCTGGGGAGGGGTTTAATGTTTCTTGTTCCCCGCATCCTGGTCTACAGTTAACCCTTGCCAATG
ACCGCAAGTGACGAGAAACC

Product: putative periplasmic ligand-binding sensor protein

Products: NA

Alternate protein names: yba2 [H]

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MQSEEQRLIDGLFGRLKEAETKTGQRDLQAEQQINQHIREQPSAPYYMAQAMIIQEAALKQLDQRVKDLEGQLAQQQQNN
ASQPSSGGFLAGLFGGGNRSTPSPREQYQAQQQNNAAWNNQTQPGYAQQQQQPAYSQPQQAAPSRAGGFLGGALQTAAGV
AGGVVLADMLTGMFRHSQPQEIVNIIDETPATPVDDSAMSNFDASNNLDTFNGGDSRFLNQDNGFQNADYQNDDNTDFSD
DDYSDDDSFI

Sequences:

>Translated_250_residues
MQSEEQRLIDGLFGRLKEAETKTGQRDLQAEQQINQHIREQPSAPYYMAQAMIIQEAALKQLDQRVKDLEGQLAQQQQNN
ASQPSSGGFLAGLFGGGNRSTPSPREQYQAQQQNNAAWNNQTQPGYAQQQQQPAYSQPQQAAPSRAGGFLGGALQTAAGV
AGGVVLADMLTGMFRHSQPQEIVNIIDETPATPVDDSAMSNFDASNNLDTFNGGDSRFLNQDNGFQNADYQNDDNTDFSD
DDYSDDDSFI
>Mature_250_residues
MQSEEQRLIDGLFGRLKEAETKTGQRDLQAEQQINQHIREQPSAPYYMAQAMIIQEAALKQLDQRVKDLEGQLAQQQQNN
ASQPSSGGFLAGLFGGGNRSTPSPREQYQAQQQNNAAWNNQTQPGYAQQQQQPAYSQPQQAAPSRAGGFLGGALQTAAGV
AGGVVLADMLTGMFRHSQPQEIVNIIDETPATPVDDSAMSNFDASNNLDTFNGGDSRFLNQDNGFQNADYQNDDNTDFSD
DDYSDDDSFI

Specific function: Unknown

COG id: COG3416

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018648 [H]

Pfam domain/function: PF09849 DUF2076 [H]

EC number: NA

Molecular weight: Translated: 27360; Mature: 27360

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSEEQRLIDGLFGRLKEAETKTGQRDLQAEQQINQHIREQPSAPYYMAQAMIIQEAALK
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QLDQRVKDLEGQLAQQQQNNASQPSSGGFLAGLFGGGNRSTPSPREQYQAQQQNNAAWNN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCC
QTQPGYAQQQQQPAYSQPQQAAPSRAGGFLGGALQTAAGVAGGVVLADMLTGMFRHSQPQ
CCCCCHHHHHCCCCCCCCHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EIVNIIDETPATPVDDSAMSNFDASNNLDTFNGGDSRFLNQDNGFQNADYQNDDNTDFSD
HHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DDYSDDDSFI
CCCCCCCCCC
>Mature Secondary Structure
MQSEEQRLIDGLFGRLKEAETKTGQRDLQAEQQINQHIREQPSAPYYMAQAMIIQEAALK
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QLDQRVKDLEGQLAQQQQNNASQPSSGGFLAGLFGGGNRSTPSPREQYQAQQQNNAAWNN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCC
QTQPGYAQQQQQPAYSQPQQAAPSRAGGFLGGALQTAAGVAGGVVLADMLTGMFRHSQPQ
CCCCCHHHHHCCCCCCCCHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EIVNIIDETPATPVDDSAMSNFDASNNLDTFNGGDSRFLNQDNGFQNADYQNDDNTDFSD
HHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DDYSDDDSFI
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]