| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yhhW [C]
Identifier: 157369243
GI number: 157369243
Start: 1103307
End: 1104188
Strand: Direct
Name: yhhW [C]
Synonym: Spro_1000
Alternate gene names: 157369243
Gene position: 1103307-1104188 (Clockwise)
Preceding gene: 157369241
Following gene: 157369244
Centisome position: 20.25
GC content: 58.73
Gene sequence:
>882_bases ATGAAAAAGATCCTCGGTATTTACAACAGCCCTGAAGCCCACTGGGTCGGCAACGGCTTCCTGGTGAATTCGCTGTTCTC CTATAACGATCTGGGGGCGGAAATGAGCCCGTTCCTGCTGTTGGATCACGCGGCACCAACCAAGTTCCGCTCTGCCTCCG GCACCCGTGGCGTTGGCCAGCACCCGCATCGCGGGTTTGAAACGGTGACCATCGTCTATCAGGGGGAAGTCGAACATCGC GATTCCACCGGCAGCGGCGGGGTGATTGGCCCTGGTGACGTGCAGTGGATGACCGCCGCCTCGGGTATTTTGCATGAAGA GTTCCATTCACGGGACTTCTCGCGCAACGGCGGCACCATGGAAATGGTGCAGTTGTGGGTAAACCTGCCGGCCAAGGACA AAATGGCTGAGCCGGGTTACCAGACGCTGCTGAATGCGGATATCCCGGTGGTTCCACTGGCGGATGGCGCAGGGCAGGTT CGGGTGATTGCCGGTAGCTTCGGCGACGCAGCAGGCCCGGCACGCACCTTCAGCCCGCTTAATGTCTGGGACATGAAGCT GAACGCCGGCCACACCACCACGTTGACGGTGAAAGAAGGCCATACGCTGGCGCTGGTGATACTGCATGGTGCTATTCATG TTAACGGCGAGGAAGTGGTGCGCGAAACCCAAATGGTCAGGTTTGACCGTGCGGGGGATTCAGTCACTATCGAAGCCAAT AACGATGTCAGCTTGCTGGTACTGAGCGGCGAGCCGATCGACGAGCCTATCGTCGGTTATGGCCCGTTCGTGATGAACAG CGACGCGGAAATCCAGCAGGCTTTCCAGGACTTCAACGGTGGTAAGTTCGGCAGCATGGCAGCTGAGCACCAGGCTGGTT AA
Upstream 100 bases:
>100_bases GAACGCTGAGTGTACATCTTGCCTACTACTGCAGCAAATAGCGTTGGATTAAACTTCTGGCATCAACCTAAGGTCGTGAG ACCTGAAACAGGAGTTCAAG
Downstream 100 bases:
>100_bases GCGCTTATCCACACTTTAGAACCGATCCGGAAAAACAGCTCCGGATCCGGTTCTACACTTTAAGACAATCTCTGCGCTCT GGCCTTATCGGCCAAGGGCA
Product: pirin domain-containing protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MKKILGIYNSPEAHWVGNGFLVNSLFSYNDLGAEMSPFLLLDHAAPTKFRSASGTRGVGQHPHRGFETVTIVYQGEVEHR DSTGSGGVIGPGDVQWMTAASGILHEEFHSRDFSRNGGTMEMVQLWVNLPAKDKMAEPGYQTLLNADIPVVPLADGAGQV RVIAGSFGDAAGPARTFSPLNVWDMKLNAGHTTTLTVKEGHTLALVILHGAIHVNGEEVVRETQMVRFDRAGDSVTIEAN NDVSLLVLSGEPIDEPIVGYGPFVMNSDAEIQQAFQDFNGGKFGSMAAEHQAG
Sequences:
>Translated_293_residues MKKILGIYNSPEAHWVGNGFLVNSLFSYNDLGAEMSPFLLLDHAAPTKFRSASGTRGVGQHPHRGFETVTIVYQGEVEHR DSTGSGGVIGPGDVQWMTAASGILHEEFHSRDFSRNGGTMEMVQLWVNLPAKDKMAEPGYQTLLNADIPVVPLADGAGQV RVIAGSFGDAAGPARTFSPLNVWDMKLNAGHTTTLTVKEGHTLALVILHGAIHVNGEEVVRETQMVRFDRAGDSVTIEAN NDVSLLVLSGEPIDEPIVGYGPFVMNSDAEIQQAFQDFNGGKFGSMAAEHQAG >Mature_293_residues MKKILGIYNSPEAHWVGNGFLVNSLFSYNDLGAEMSPFLLLDHAAPTKFRSASGTRGVGQHPHRGFETVTIVYQGEVEHR DSTGSGGVIGPGDVQWMTAASGILHEEFHSRDFSRNGGTMEMVQLWVNLPAKDKMAEPGYQTLLNADIPVVPLADGAGQV RVIAGSFGDAAGPARTFSPLNVWDMKLNAGHTTTLTVKEGHTLALVILHGAIHVNGEEVVRETQMVRFDRAGDSVTIEAN NDVSLLVLSGEPIDEPIVGYGPFVMNSDAEIQQAFQDFNGGKFGSMAAEHQAG
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=256, Percent_Identity=36.328125, Blast_Score=141, Evalue=5e-34, Organism=Homo sapiens, GI4505823, Length=256, Percent_Identity=36.328125, Blast_Score=141, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 31441; Mature: 31441
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILGIYNSPEAHWVGNGFLVNSLFSYNDLGAEMSPFLLLDHAAPTKFRSASGTRGVGQ CCCEEECCCCCCCEEECCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC HPHRGFETVTIVYQGEVEHRDSTGSGGVIGPGDVQWMTAASGILHEEFHSRDFSRNGGTM CCCCCCEEEEEEEECCCCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHHCCCCCCCCCHH EMVQLWVNLPAKDKMAEPGYQTLLNADIPVVPLADGAGQVRVIAGSFGDAAGPARTFSPL HHHHHHHCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCC NVWDMKLNAGHTTTLTVKEGHTLALVILHGAIHVNGEEVVRETQMVRFDRAGDSVTIEAN EEEEEEECCCCEEEEEEECCCEEEEEEEEEEEEECHHHHHHHHHHEEEECCCCEEEEEEC NDVSLLVLSGEPIDEPIVGYGPFVMNSDAEIQQAFQDFNGGKFGSMAAEHQAG CCEEEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKILGIYNSPEAHWVGNGFLVNSLFSYNDLGAEMSPFLLLDHAAPTKFRSASGTRGVGQ CCCEEECCCCCCCEEECCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC HPHRGFETVTIVYQGEVEHRDSTGSGGVIGPGDVQWMTAASGILHEEFHSRDFSRNGGTM CCCCCCEEEEEEEECCCCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHHCCCCCCCCCHH EMVQLWVNLPAKDKMAEPGYQTLLNADIPVVPLADGAGQVRVIAGSFGDAAGPARTFSPL HHHHHHHCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCC NVWDMKLNAGHTTTLTVKEGHTLALVILHGAIHVNGEEVVRETQMVRFDRAGDSVTIEAN EEEEEEECCCCEEEEEEECCCEEEEEEEEEEEEECHHHHHHHHHHEEEECCCCEEEEEEC NDVSLLVLSGEPIDEPIVGYGPFVMNSDAEIQQAFQDFNGGKFGSMAAEHQAG CCEEEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]