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The map label for this gene is ycaC [H]

Identifier: 157369244

GI number: 157369244

Start: 1104328

End: 1104954

Strand: Direct

Name: ycaC [H]

Synonym: Spro_1001

Alternate gene names: 157369244

Gene position: 1104328-1104954 (Clockwise)

Preceding gene: 157369243

Following gene: 157369245

Centisome position: 20.27

GC content: 54.39

Gene sequence:

>627_bases
ATGACTGCAAATTACAAACGCCTCGACAAGGATCAGGCCGCCGTATTGCTGGTGGATCATCAGGCAGGACTGCTTTCACT
GGTACGAGATATCGATCCCGATCGTTTCAAAAACAACGTACTGGCATTGGGTGATTTAGCGAAGTATTTCAACCTGCCGA
CCATCCTGACCACCAGTTTTGAAGATGGCCCCAACGGCCCGCTGGTACCGGAGCTAAAAGCTCAATTCCCTGATGCGCCC
TTTATCCCTCGTCCTGGACAGATCAATGCCTGGGACAACGATGACTTCGTCAAGGCAGTGAAAGCCACCGGTCGTAAACA
ATTGATTATCGCCGGGGTGGTTACCGAAGTGTGCGTGGCCTTCCCGGCGCTGTCTGCTCTCAGCGAAGGTTTTGAGGTGT
TTGTGGTCACCGACGCTTCCGGTACCTTTAACGAACTGACTCGTCAATCGGCCTGGAGCCGGATGGAAGCCGAAGGCGCG
CAGTTGATGACCTGGTTCGGCGTTGCCTGTGAGCTGCACCGTGACTGGCGTAACGATGTGGAAGGGCTGGGGGCGCTGTT
TGCCAATCATATCCCTGATTACCGTAACCTGATGACCAGTTACAGCACGCTGACCAGCGGCAAGTAA

Upstream 100 bases:

>100_bases
TCCGGATCCGGTTCTACACTTTAAGACAATCTCTGCGCTCTGGCCTTATCGGCCAAGGGCAATTTTAGCCGCAACAATCA
AAACCCCACAGGAGTAAACC

Downstream 100 bases:

>100_bases
TGTCATACAGGAAGCAATCCCCGATGACTCTTTACATAATCCTTAATGTTTCATCACGTTAGCGGTGGTATGTAAGCAAA
GATCATCGGGGGTGAAAAGG

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MTANYKRLDKDQAAVLLVDHQAGLLSLVRDIDPDRFKNNVLALGDLAKYFNLPTILTTSFEDGPNGPLVPELKAQFPDAP
FIPRPGQINAWDNDDFVKAVKATGRKQLIIAGVVTEVCVAFPALSALSEGFEVFVVTDASGTFNELTRQSAWSRMEAEGA
QLMTWFGVACELHRDWRNDVEGLGALFANHIPDYRNLMTSYSTLTSGK

Sequences:

>Translated_208_residues
MTANYKRLDKDQAAVLLVDHQAGLLSLVRDIDPDRFKNNVLALGDLAKYFNLPTILTTSFEDGPNGPLVPELKAQFPDAP
FIPRPGQINAWDNDDFVKAVKATGRKQLIIAGVVTEVCVAFPALSALSEGFEVFVVTDASGTFNELTRQSAWSRMEAEGA
QLMTWFGVACELHRDWRNDVEGLGALFANHIPDYRNLMTSYSTLTSGK
>Mature_207_residues
TANYKRLDKDQAAVLLVDHQAGLLSLVRDIDPDRFKNNVLALGDLAKYFNLPTILTTSFEDGPNGPLVPELKAQFPDAPF
IPRPGQINAWDNDDFVKAVKATGRKQLIIAGVVTEVCVAFPALSALSEGFEVFVVTDASGTFNELTRQSAWSRMEAEGAQ
LMTWFGVACELHRDWRNDVEGLGALFANHIPDYRNLMTSYSTLTSGK

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=208, Percent_Identity=85.0961538461538, Blast_Score=375, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 22921; Mature: 22790

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTANYKRLDKDQAAVLLVDHQAGLLSLVRDIDPDRFKNNVLALGDLAKYFNLPTILTTSF
CCCCCCCCCCCCEEEEEEECCHHHHHHHHHCCHHHHHCCEEHHHHHHHHHCCCEEEEECC
EDGPNGPLVPELKAQFPDAPFIPRPGQINAWDNDDFVKAVKATGRKQLIIAGVVTEVCVA
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHH
FPALSALSEGFEVFVVTDASGTFNELTRQSAWSRMEAEGAQLMTWFGVACELHRDWRNDV
HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
EGLGALFANHIPDYRNLMTSYSTLTSGK
HHHHHHHHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TANYKRLDKDQAAVLLVDHQAGLLSLVRDIDPDRFKNNVLALGDLAKYFNLPTILTTSF
CCCCCCCCCCCEEEEEEECCHHHHHHHHHCCHHHHHCCEEHHHHHHHHHCCCEEEEECC
EDGPNGPLVPELKAQFPDAPFIPRPGQINAWDNDDFVKAVKATGRKQLIIAGVVTEVCVA
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHH
FPALSALSEGFEVFVVTDASGTFNELTRQSAWSRMEAEGAQLMTWFGVACELHRDWRNDV
HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
EGLGALFANHIPDYRNLMTSYSTLTSGK
HHHHHHHHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]