Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

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The map label for this gene is nadR [H]

Identifier: 157368913

GI number: 157368913

Start: 734613

End: 735872

Strand: Direct

Name: nadR [H]

Synonym: Spro_0668

Alternate gene names: 157368913

Gene position: 734613-735872 (Clockwise)

Preceding gene: 157368912

Following gene: 157368915

Centisome position: 13.48

GC content: 54.05

Gene sequence:

>1260_bases
ATGCGGCAATTCGATTACCTGAAGGCGTCGATTAAGCAGAAGAGCTGCACTCTGCAGCAGGTGGCGGATGCCAGTGGTAT
GACCAAAGGCTATCTCAGCCAGTTACTGAACGACAAAATCAAAAGTCCGAGCGCCCAGAAACTGGAGGCGCTGCACCGTT
ACCTTGGCCTGGAGTTTCCACGGCGTGAGAAAAAGGTCGGCGTGGTGTTTGGTAAATTTTACCCTTTGCACACCGGCCAC
ATTTACCTGATCCAGCGCGCCTGCAGCCAGGTAGATGAGCTGCACGTGATCCTGTGTCACGACGAACCCCGCGACCGGGA
GCTGTTCGAAAACAGTTCAATGTCGCAACAGCCGACGGTCAGCGATCGTCTGCGCTGGCTGCTGCAAACCTTTAAGTACC
AGAAAAACATCCATATTCATTCCTTCGACGAACAGGGTATTGAACCCTATCCGCATGGCTGGAACGTCTGGAGCGATGGG
GTGAAGGCTTTTCTGGAACAGAAAGCTATTGTGCCGAGCTTTATCTATTCCAGCGAAGCGCAGGATGCCCCGCGCTACCG
TGAACATCTGGGGATTGAAACCGTTCTGATTGATCCCGAACGTTCATTTATGAATATCAGCGGCCGCCAGATCCGTCAGG
ATCCGTTCCTTTATTGGGATTATATTCCAACCGAAGTGAAGCCGTTCTTTGTTCGTACCGTGGCGATCCTCGGCGGTGAG
TCGAGCGGCAAATCGACGCTGGTGAATAAGCTGGCAAACATCTTTAACACCACCAGTGCCTGGGAATATGGCCGCGACTA
TGTGTTCTCGCACCTCGGTGGGGATGAGATGGCGCTGCAGTATTCCGACTACGACAAGATTGCTCTTGGGCAGGCGCAGT
ACGTCGACTTTGCGGTGAAGTACGCCAATAAAGTGGCCTTTATCGACACCGACTTCGTCACCACTCAGGCCTTTTGTAAA
AAGTACGAAGGGCGAGAGCACCCCTTTGTGCAGGCGCTGATCGACGAGTACCGGTTTGATCTGGTGATCCTGCTGGAAAA
CAACACCCCCTGGGTGGCGGATGGCCTGCGCAGCCTGGGTAACCCCAAGGATCGCAAAGTGTTCCAGCATTTGTTGGAAG
AGATGCTGCGGGCCAATAACATCGAGTATGTACACGTGGAGTCCAGCGACTATGACGAACGCTTCCTGCGCTGCGTCGAG
CTGGTAAAACAACTGCTGGCGGCCGATGCCAGTCGGCTGCTCGGTGTTGCGGCGGTATAA

Upstream 100 bases:

>100_bases
AGAAACTGGCGGACGCATTGGACGTGCTGGAACAGTTTTATTAATTGCCACGCGGTGTGCAGATTATGCTATTTTGTTTA
GCATATTAAACGGAGGGGCT

Downstream 100 bases:

>100_bases
GCCATCGGGGCGCAGCGTGCTGCGCCCCGTCTGCCATCAGTAAACAATCACCAGTTTGCCCTGCATATGCCCGTCGAGCA
GTTTTTTATGCGCGGCGGTC

Product: nicotinamide-nucleotide adenylyltransferase

Products: NA

Alternate protein names: Transcriptional regulator NadR; Nicotinamide mononucleotide adenylyltransferase; NMN adenylyltransferase; NMN-AT; NMNAT; Nicotinamide ribonucleotide adenylyltransferase; Nicotinamide-nucleotide adenylyltransferase; Ribosylnicotinamide kinase; RNK; Nicotinamide riboside kinase; NRK; NmR-K [H]

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MRQFDYLKASIKQKSCTLQQVADASGMTKGYLSQLLNDKIKSPSAQKLEALHRYLGLEFPRREKKVGVVFGKFYPLHTGH
IYLIQRACSQVDELHVILCHDEPRDRELFENSSMSQQPTVSDRLRWLLQTFKYQKNIHIHSFDEQGIEPYPHGWNVWSDG
VKAFLEQKAIVPSFIYSSEAQDAPRYREHLGIETVLIDPERSFMNISGRQIRQDPFLYWDYIPTEVKPFFVRTVAILGGE
SSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDEMALQYSDYDKIALGQAQYVDFAVKYANKVAFIDTDFVTTQAFCK
KYEGREHPFVQALIDEYRFDLVILLENNTPWVADGLRSLGNPKDRKVFQHLLEEMLRANNIEYVHVESSDYDERFLRCVE
LVKQLLAADASRLLGVAAV

Sequences:

>Translated_419_residues
MRQFDYLKASIKQKSCTLQQVADASGMTKGYLSQLLNDKIKSPSAQKLEALHRYLGLEFPRREKKVGVVFGKFYPLHTGH
IYLIQRACSQVDELHVILCHDEPRDRELFENSSMSQQPTVSDRLRWLLQTFKYQKNIHIHSFDEQGIEPYPHGWNVWSDG
VKAFLEQKAIVPSFIYSSEAQDAPRYREHLGIETVLIDPERSFMNISGRQIRQDPFLYWDYIPTEVKPFFVRTVAILGGE
SSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDEMALQYSDYDKIALGQAQYVDFAVKYANKVAFIDTDFVTTQAFCK
KYEGREHPFVQALIDEYRFDLVILLENNTPWVADGLRSLGNPKDRKVFQHLLEEMLRANNIEYVHVESSDYDERFLRCVE
LVKQLLAADASRLLGVAAV
>Mature_419_residues
MRQFDYLKASIKQKSCTLQQVADASGMTKGYLSQLLNDKIKSPSAQKLEALHRYLGLEFPRREKKVGVVFGKFYPLHTGH
IYLIQRACSQVDELHVILCHDEPRDRELFENSSMSQQPTVSDRLRWLLQTFKYQKNIHIHSFDEQGIEPYPHGWNVWSDG
VKAFLEQKAIVPSFIYSSEAQDAPRYREHLGIETVLIDPERSFMNISGRQIRQDPFLYWDYIPTEVKPFFVRTVAILGGE
SSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDEMALQYSDYDKIALGQAQYVDFAVKYANKVAFIDTDFVTTQAFCK
KYEGREHPFVQALIDEYRFDLVILLENNTPWVADGLRSLGNPKDRKVFQHLLEEMLRANNIEYVHVESSDYDERFLRCVE
LVKQLLAADASRLLGVAAV

Specific function: This enzyme has three activities:DNA binding, nicotinamide mononucleotide (NMN) adenylyltransferase and ribosylnicotinamide (RN) kinase. The DNA-binding domain binds to the nadB operator sequence in an NAD- and ATP-dependent manner. As NAD levels increase

COG id: COG3172

COG function: function code H; Predicted ATPase/kinase involved in NAD metabolism

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein. Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082440, Length=407, Percent_Identity=82.0638820638821, Blast_Score=722, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016429
- InterPro:   IPR004821
- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR006417
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: =2.7.7.1; =2.7.1.22 [H]

Molecular weight: Translated: 48351; Mature: 48351

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS50943 HTH_CROC1 ; PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQFDYLKASIKQKSCTLQQVADASGMTKGYLSQLLNDKIKSPSAQKLEALHRYLGLEFP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
RREKKVGVVFGKFYPLHTGHIYLIQRACSQVDELHVILCHDEPRDRELFENSSMSQQPTV
CCCCCEEEEEECEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHCCCCCCCCCH
SDRLRWLLQTFKYQKNIHIHSFDEQGIEPYPHGWNVWSDGVKAFLEQKAIVPSFIYSSEA
HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCC
QDAPRYREHLGIETVLIDPERSFMNISGRQIRQDPFLYWDYIPTEVKPFFVRTVAILGGE
CCCHHHHHHCCCEEEEECCCHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCC
SSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDEMALQYSDYDKIALGQAQYVDFAVK
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCHHHHHHHHH
YANKVAFIDTDFVTTQAFCKKYEGREHPFVQALIDEYRFDLVILLENNTPWVADGLRSLG
HHCEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHC
NPKDRKVFQHLLEEMLRANNIEYVHVESSDYDERFLRCVELVKQLLAADASRLLGVAAV
CCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRQFDYLKASIKQKSCTLQQVADASGMTKGYLSQLLNDKIKSPSAQKLEALHRYLGLEFP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
RREKKVGVVFGKFYPLHTGHIYLIQRACSQVDELHVILCHDEPRDRELFENSSMSQQPTV
CCCCCEEEEEECEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHCCCCCCCCCH
SDRLRWLLQTFKYQKNIHIHSFDEQGIEPYPHGWNVWSDGVKAFLEQKAIVPSFIYSSEA
HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCC
QDAPRYREHLGIETVLIDPERSFMNISGRQIRQDPFLYWDYIPTEVKPFFVRTVAILGGE
CCCHHHHHHCCCEEEEECCCHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCC
SSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDEMALQYSDYDKIALGQAQYVDFAVK
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCHHHHHHHHH
YANKVAFIDTDFVTTQAFCKKYEGREHPFVQALIDEYRFDLVILLENNTPWVADGLRSLG
HHCEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHC
NPKDRKVFQHLLEEMLRANNIEYVHVESSDYDERFLRCVELVKQLLAADASRLLGVAAV
CCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1327967 [H]