Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

Click here to switch to the map view.

The map label for this gene is yjjJ [H]

Identifier: 157368909

GI number: 157368909

Start: 729982

End: 731325

Strand: Direct

Name: yjjJ [H]

Synonym: Spro_0664

Alternate gene names: 157368909

Gene position: 729982-731325 (Clockwise)

Preceding gene: 157368908

Following gene: 157368911

Centisome position: 13.4

GC content: 54.09

Gene sequence:

>1344_bases
ATGACGGGCATCGAGCAATTACTACGTAATGGCCCAGCGACATCTACAGCACTTACTGAAGCGCTGGGTATCAGTCAACC
GACATTATCGCGCCGTATTCGCAATTTGGCAGGAAGCGTACTGGTGATGGGCAAAGGCCGGGCCACCCGCTATGCGTTGC
TCAGAAGCGTGGCAGGTGAAGGGCATTTTCCGCTGTATCAGGTGGATGAGCAGGGTAAGGCACATAAGTTTGCCACGCTT
TATCCTGTCTATCCGGCTGAAGGATGCGCGGTACAAAATGAGCAAAATGGTGAATGGCAACTTTATGATGGTCTGCCTTG
GTATCTTAACGATCTGCGGCCGATAGGTTTTCTTAGCCGGGCATGGGGGAAGGCGGTTTCTCAAGTATTGCGCCTGCCGG
AAGATACTCTGCTTTGGAACGAAGAGCAGCGACTGTGGGCGCTTTGTCACTTTGGTGACGACATGAGCGGTAACCTGCTG
CCTGGCAACGGCAGCTATCAACGCTGGCTGGTACATGACCTGGAGCAGGCAGTGCCGATGGCGGAAAAAACAGCCCGTTA
CGCAGAGCTGGCTGAGAAGGCGCTTGCAGGGGAACTGGTCGGGTCTTCTGCCGGTGGTGAGCAACCCAAGTTTATTGCTT
ATGCTGAACTGAGGGACGAGCGACAAGGTCATGTATTGGTTAAATTCAGTACGGCCCCGGAAAACCCCAATGCGCAGCGT
TGGAGTGATTTGCTGATCGCAGAGTCACTGGCGTTACAGGTCGTGGCGGAAGCGGGGTTGCCTGCGGCACGAAGTGAAAT
CTTGTTGGGTGAAAATCAGCAGTGTTTTCTGGAAATTGAACGGTTCGATCGCATCGGCCCGTTTGGCCGGGTGGCGATGG
TTTCACTCGAAGCATTGGATGCCGAGTTTAGCGGTAGCGGCAATGCCAATTGGGTTACGGCGGCGCAAGGGTTATTGCAG
CATGGTGTGATAGACAACCCCACCTGTCAGAGAATGGCTCTGTATTGGGCATTCGGCAGGTTGATTGCCAATAGCGATAT
GCATCAGGGGAACTTGTCGTTTCTGCACCCCGAACAGCGACCGGTGGTTTTAGCCCCTTTGTATGACATGTTGCCGATGG
CATTTGCGCCAACCAGCAGCGGTAATATGCGCCATCAAGCGTTGGAAATCCGATTGGGTCATGAAGTCAGCGGTGCCGTT
TGGCGGCAGGCGGAATTGATGGCGCTGGAGTTTTGGCAACGTGTGGCACGGCATACACTTATCAGCGAAGATTTTCGCGT
TATCGCCGACCAGATGCTGGCACAGGTTCAGGGGCTGAACGAGCGTATTCAGCGAATGGCTTAA

Upstream 100 bases:

>100_bases
TCTATTCACCTTCCCTAAATCATTTCCTGAAAATACTTTACCTGACAGCTAATTAGCGCTATTACTCTATTCATAAATCT
ATTCACGAATCTATTCATCT

Downstream 100 bases:

>100_bases
GAACCGCTCTCGGGCTTCTTCTCTTCTTCTTTATTCGCATCCGGCCGCGCGTCGTCATCGTCATTTTCTACCGTGTTACC
TTCTTCCAATGGCGTATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MTGIEQLLRNGPATSTALTEALGISQPTLSRRIRNLAGSVLVMGKGRATRYALLRSVAGEGHFPLYQVDEQGKAHKFATL
YPVYPAEGCAVQNEQNGEWQLYDGLPWYLNDLRPIGFLSRAWGKAVSQVLRLPEDTLLWNEEQRLWALCHFGDDMSGNLL
PGNGSYQRWLVHDLEQAVPMAEKTARYAELAEKALAGELVGSSAGGEQPKFIAYAELRDERQGHVLVKFSTAPENPNAQR
WSDLLIAESLALQVVAEAGLPAARSEILLGENQQCFLEIERFDRIGPFGRVAMVSLEALDAEFSGSGNANWVTAAQGLLQ
HGVIDNPTCQRMALYWAFGRLIANSDMHQGNLSFLHPEQRPVVLAPLYDMLPMAFAPTSSGNMRHQALEIRLGHEVSGAV
WRQAELMALEFWQRVARHTLISEDFRVIADQMLAQVQGLNERIQRMA

Sequences:

>Translated_447_residues
MTGIEQLLRNGPATSTALTEALGISQPTLSRRIRNLAGSVLVMGKGRATRYALLRSVAGEGHFPLYQVDEQGKAHKFATL
YPVYPAEGCAVQNEQNGEWQLYDGLPWYLNDLRPIGFLSRAWGKAVSQVLRLPEDTLLWNEEQRLWALCHFGDDMSGNLL
PGNGSYQRWLVHDLEQAVPMAEKTARYAELAEKALAGELVGSSAGGEQPKFIAYAELRDERQGHVLVKFSTAPENPNAQR
WSDLLIAESLALQVVAEAGLPAARSEILLGENQQCFLEIERFDRIGPFGRVAMVSLEALDAEFSGSGNANWVTAAQGLLQ
HGVIDNPTCQRMALYWAFGRLIANSDMHQGNLSFLHPEQRPVVLAPLYDMLPMAFAPTSSGNMRHQALEIRLGHEVSGAV
WRQAELMALEFWQRVARHTLISEDFRVIADQMLAQVQGLNERIQRMA
>Mature_446_residues
TGIEQLLRNGPATSTALTEALGISQPTLSRRIRNLAGSVLVMGKGRATRYALLRSVAGEGHFPLYQVDEQGKAHKFATLY
PVYPAEGCAVQNEQNGEWQLYDGLPWYLNDLRPIGFLSRAWGKAVSQVLRLPEDTLLWNEEQRLWALCHFGDDMSGNLLP
GNGSYQRWLVHDLEQAVPMAEKTARYAELAEKALAGELVGSSAGGEQPKFIAYAELRDERQGHVLVKFSTAPENPNAQRW
SDLLIAESLALQVVAEAGLPAARSEILLGENQQCFLEIERFDRIGPFGRVAMVSLEALDAEFSGSGNANWVTAAQGLLQH
GVIDNPTCQRMALYWAFGRLIANSDMHQGNLSFLHPEQRPVVLAPLYDMLPMAFAPTSSGNMRHQALEIRLGHEVSGAVW
RQAELMALEFWQRVARHTLISEDFRVIADQMLAQVQGLNERIQRMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790845, Length=446, Percent_Identity=45.7399103139013, Blast_Score=378, Evalue=1e-106,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012893
- InterPro:   IPR012894 [H]

Pfam domain/function: PF07804 HipA_C; PF07805 HipA_N [H]

EC number: NA

Molecular weight: Translated: 49641; Mature: 49510

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGIEQLLRNGPATSTALTEALGISQPTLSRRIRNLAGSVLVMGKGRATRYALLRSVAGE
CCCHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCC
GHFPLYQVDEQGKAHKFATLYPVYPAEGCAVQNEQNGEWQLYDGLPWYLNDLRPIGFLSR
CCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCHHHHHHH
AWGKAVSQVLRLPEDTLLWNEEQRLWALCHFGDDMSGNLLPGNGSYQRWLVHDLEQAVPM
HHHHHHHHHHHCCCHHEEECCCCCEEEEEECCCCCCCCEECCCCCCHHHHHHHHHHHCCH
AEKTARYAELAEKALAGELVGSSAGGEQPKFIAYAELRDERQGHVLVKFSTAPENPNAQR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHCCCCCCEEEEEEECCCCCCCHHH
WSDLLIAESLALQVVAEAGLPAARSEILLGENQQCFLEIERFDRIGPFGRVAMVSLEALD
HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEHHHHCCCCCCHHHHEEHHHHC
AEFSGSGNANWVTAAQGLLQHGVIDNPTCQRMALYWAFGRLIANSDMHQGNLSFLHPEQR
CCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC
PVVLAPLYDMLPMAFAPTSSGNMRHQALEIRLGHEVSGAVWRQAELMALEFWQRVARHTL
CEEEECHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
ISEDFRVIADQMLAQVQGLNERIQRMA
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGIEQLLRNGPATSTALTEALGISQPTLSRRIRNLAGSVLVMGKGRATRYALLRSVAGE
CCHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCC
GHFPLYQVDEQGKAHKFATLYPVYPAEGCAVQNEQNGEWQLYDGLPWYLNDLRPIGFLSR
CCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCHHHHHHH
AWGKAVSQVLRLPEDTLLWNEEQRLWALCHFGDDMSGNLLPGNGSYQRWLVHDLEQAVPM
HHHHHHHHHHHCCCHHEEECCCCCEEEEEECCCCCCCCEECCCCCCHHHHHHHHHHHCCH
AEKTARYAELAEKALAGELVGSSAGGEQPKFIAYAELRDERQGHVLVKFSTAPENPNAQR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHCCCCCCEEEEEEECCCCCCCHHH
WSDLLIAESLALQVVAEAGLPAARSEILLGENQQCFLEIERFDRIGPFGRVAMVSLEALD
HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEHHHHCCCCCCHHHHEEHHHHC
AEFSGSGNANWVTAAQGLLQHGVIDNPTCQRMALYWAFGRLIANSDMHQGNLSFLHPEQR
CCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC
PVVLAPLYDMLPMAFAPTSSGNMRHQALEIRLGHEVSGAVWRQAELMALEFWQRVARHTL
CEEEECHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
ISEDFRVIADQMLAQVQGLNERIQRMA
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 3299264 [H]