| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yeiJ [C]
Identifier: 157368904
GI number: 157368904
Start: 723924
End: 725201
Strand: Direct
Name: yeiJ [C]
Synonym: Spro_0659
Alternate gene names: 157368904
Gene position: 723924-725201 (Clockwise)
Preceding gene: 157368903
Following gene: 157368905
Centisome position: 13.29
GC content: 59.47
Gene sequence:
>1278_bases ATGCAACTCATCATGAGCCTGGTCGGCATGGCGGCGCTGATCGCCATCGCCGTGCTGCTCTCCAGCAACCGCCGCGCGAT TAAGTTTCGCACCGTTGGCTGGGCATTCGTTCTTCAGGTCGCCATCGGCGCGCTGGTGCTGTACGTCCCGGTAGGCCGCG CCATTCTTGGCGGCATGTCGGCCGGCGTGGCTAACGTAATCGCCTACGGTAATCAGGGTATTTCATTTATCTTCGGCGGT CTGGTTTCCGACAAGATGTTTGAAGTCTTTGGCGGCGGCGGCTTTGTTTTTGCGCTGCGCGTCCTGCCGGTGATCGTGTT CTTCTCCTCGCTGATTGCGGTGCTTTACTACCTCGGCATCATGCAACTGGTGATCCGTGTGCTGGGCGGCGGCGTGCAAA AATTGCTGGGTACCTCGCGGACAGAATCGCTGTCGGCGACCGCCAATATCTTTGTTGGCCAAACTGAAGCTCCGCTGGTG GTGCGTCCGTATATCGCCACCATGACCCAATCTGAGTTGTTCACCGTGATGTGTGGCGGCCTGGCCTCGGTGGCCGGTTC GGTGCTGGCAGGTTATGCCCAGATGGGCGTACCGCTGGAATACCTGATTGCGGCTTCGTTCATGGCCGCACCGGGTGGCC TGCTGTTTGCCAAACTGATGGTGCCGGAAACCGAAAAAACCCACGACAGGGACGATGCAACGAAGTTGATCGCGGAAGAA GACCGCCCGGCCAACGTGATTGACGCAGCGGCTTCCGGTGCAGCTTCCGGCATGCAGTTGGCGCTGAACGTGGGCGCAAT GCTGCTGGCGTTTATCGCGCTGATCGCCCTGTTGAACGGCATTCTCGGCGGTATTGGCGGCTGGTTCGACTATCCGCAGC TGTCGCTGGAGCTGATCCTCGGTTGGGTGTTCTCACCTATTGCCTTCCTGATCGGCGTGCCATGGCATGAAGCGATGACC GCCGGTTCGTTTATCGGCCAGAAGATCATCGTGAATGAATTTGTTGCCTACATGAACTTTGGTGCTTATTTGCGTCCGGA CGACGTGGTGGCGGCAGAGGGGCTGCAGGTGCTGTCGACGCATACCAAGGCGATTATCTCCTTTGCCCTGTGCGGCTTTG CCAACCTGTCATCGGTGGCGATCCTGCTCGGTGGTCTGGGCAGCATGGCACCGAATCGTCGTCACGACATCGCGCGTTTC GGTCTGAAAGCCGTGGCGGCGGGGACGCTCTCCAACCTGATGAGCGCGACCATCGCCGGGTTCTTCCTGGCGCTGTAA
Upstream 100 bases:
>100_bases TCCCGCTCCGTATAATCGCACCCCGAAAACACTCATAAGCAACCCTCGCGGGACAACCGGACAGGGATGCATTTCTTTTT TCGCAACAGGGATACTTTGC
Downstream 100 bases:
>100_bases TCCCCGGGCTGTCCTGCATAGGGCAACAGGCTCTATTGCAGGACAGCGCCTATACTTCTAACACGGGCACAGAATGCTGT GCCCGCTATCTTTGCCCGTT
Product: nucleoside transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MQLIMSLVGMAALIAIAVLLSSNRRAIKFRTVGWAFVLQVAIGALVLYVPVGRAILGGMSAGVANVIAYGNQGISFIFGG LVSDKMFEVFGGGGFVFALRVLPVIVFFSSLIAVLYYLGIMQLVIRVLGGGVQKLLGTSRTESLSATANIFVGQTEAPLV VRPYIATMTQSELFTVMCGGLASVAGSVLAGYAQMGVPLEYLIAASFMAAPGGLLFAKLMVPETEKTHDRDDATKLIAEE DRPANVIDAAASGAASGMQLALNVGAMLLAFIALIALLNGILGGIGGWFDYPQLSLELILGWVFSPIAFLIGVPWHEAMT AGSFIGQKIIVNEFVAYMNFGAYLRPDDVVAAEGLQVLSTHTKAIISFALCGFANLSSVAILLGGLGSMAPNRRHDIARF GLKAVAAGTLSNLMSATIAGFFLAL
Sequences:
>Translated_425_residues MQLIMSLVGMAALIAIAVLLSSNRRAIKFRTVGWAFVLQVAIGALVLYVPVGRAILGGMSAGVANVIAYGNQGISFIFGG LVSDKMFEVFGGGGFVFALRVLPVIVFFSSLIAVLYYLGIMQLVIRVLGGGVQKLLGTSRTESLSATANIFVGQTEAPLV VRPYIATMTQSELFTVMCGGLASVAGSVLAGYAQMGVPLEYLIAASFMAAPGGLLFAKLMVPETEKTHDRDDATKLIAEE DRPANVIDAAASGAASGMQLALNVGAMLLAFIALIALLNGILGGIGGWFDYPQLSLELILGWVFSPIAFLIGVPWHEAMT AGSFIGQKIIVNEFVAYMNFGAYLRPDDVVAAEGLQVLSTHTKAIISFALCGFANLSSVAILLGGLGSMAPNRRHDIARF GLKAVAAGTLSNLMSATIAGFFLAL >Mature_425_residues MQLIMSLVGMAALIAIAVLLSSNRRAIKFRTVGWAFVLQVAIGALVLYVPVGRAILGGMSAGVANVIAYGNQGISFIFGG LVSDKMFEVFGGGGFVFALRVLPVIVFFSSLIAVLYYLGIMQLVIRVLGGGVQKLLGTSRTESLSATANIFVGQTEAPLV VRPYIATMTQSELFTVMCGGLASVAGSVLAGYAQMGVPLEYLIAASFMAAPGGLLFAKLMVPETEKTHDRDDATKLIAEE DRPANVIDAAASGAASGMQLALNVGAMLLAFIALIALLNGILGGIGGWFDYPQLSLELILGWVFSPIAFLIGVPWHEAMT AGSFIGQKIIVNEFVAYMNFGAYLRPDDVVAAEGLQVLSTHTKAIISFALCGFANLSSVAILLGGLGSMAPNRRHDIARF GLKAVAAGTLSNLMSATIAGFFLAL
Specific function: Unknown
COG id: COG1972
COG function: function code F; Nucleoside permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]
Homologues:
Organism=Homo sapiens, GI11545853, Length=426, Percent_Identity=39.6713615023474, Blast_Score=291, Evalue=1e-78, Organism=Homo sapiens, GI42542381, Length=425, Percent_Identity=38.8235294117647, Blast_Score=288, Evalue=6e-78, Organism=Homo sapiens, GI227116277, Length=426, Percent_Identity=36.3849765258216, Blast_Score=266, Evalue=2e-71, Organism=Escherichia coli, GI1788485, Length=425, Percent_Identity=49.6470588235294, Blast_Score=391, Evalue=1e-110, Organism=Escherichia coli, GI1788488, Length=425, Percent_Identity=50.1176470588235, Blast_Score=379, Evalue=1e-106, Organism=Escherichia coli, GI1788737, Length=430, Percent_Identity=30.6976744186047, Blast_Score=181, Evalue=8e-47, Organism=Caenorhabditis elegans, GI17560276, Length=406, Percent_Identity=31.0344827586207, Blast_Score=204, Evalue=6e-53, Organism=Caenorhabditis elegans, GI71991794, Length=409, Percent_Identity=29.5843520782396, Blast_Score=191, Evalue=9e-49, Organism=Caenorhabditis elegans, GI25146537, Length=201, Percent_Identity=30.3482587064677, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI45552519, Length=423, Percent_Identity=37.8250591016548, Blast_Score=274, Evalue=8e-74, Organism=Drosophila melanogaster, GI45552517, Length=423, Percent_Identity=37.8250591016548, Blast_Score=274, Evalue=9e-74, Organism=Drosophila melanogaster, GI19921868, Length=423, Percent_Identity=37.8250591016548, Blast_Score=274, Evalue=9e-74, Organism=Drosophila melanogaster, GI281360430, Length=414, Percent_Identity=37.1980676328502, Blast_Score=254, Evalue=8e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008276 - InterPro: IPR018270 - InterPro: IPR011642 - InterPro: IPR011657 - InterPro: IPR002668 [H]
Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]
EC number: NA
Molecular weight: Translated: 44441; Mature: 44441
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLIMSLVGMAALIAIAVLLSSNRRAIKFRTVGWAFVLQVAIGALVLYVPVGRAILGGMS CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGVANVIAYGNQGISFIFGGLVSDKMFEVFGGGGFVFALRVLPVIVFFSSLIAVLYYLGI HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MQLVIRVLGGGVQKLLGTSRTESLSATANIFVGQTEAPLVVRPYIATMTQSELFTVMCGG HHHHHHHHCCHHHHHHCCCCCCCCCCHHEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHH LASVAGSVLAGYAQMGVPLEYLIAASFMAAPGGLLFAKLMVPETEKTHDRDDATKLIAEE HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCC DRPANVIDAAASGAASGMQLALNVGAMLLAFIALIALLNGILGGIGGWFDYPQLSLELIL CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH GWVFSPIAFLIGVPWHEAMTAGSFIGQKIIVNEFVAYMNFGAYLRPDDVVAAEGLQVLST HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH HTKAIISFALCGFANLSSVAILLGGLGSMAPNRRHDIARFGLKAVAAGTLSNLMSATIAG HHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FFLAL HHHCC >Mature Secondary Structure MQLIMSLVGMAALIAIAVLLSSNRRAIKFRTVGWAFVLQVAIGALVLYVPVGRAILGGMS CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGVANVIAYGNQGISFIFGGLVSDKMFEVFGGGGFVFALRVLPVIVFFSSLIAVLYYLGI HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MQLVIRVLGGGVQKLLGTSRTESLSATANIFVGQTEAPLVVRPYIATMTQSELFTVMCGG HHHHHHHHCCHHHHHHCCCCCCCCCCHHEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHH LASVAGSVLAGYAQMGVPLEYLIAASFMAAPGGLLFAKLMVPETEKTHDRDDATKLIAEE HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCC DRPANVIDAAASGAASGMQLALNVGAMLLAFIALIALLNGILGGIGGWFDYPQLSLELIL CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH GWVFSPIAFLIGVPWHEAMTAGSFIGQKIIVNEFVAYMNFGAYLRPDDVVAAEGLQVLST HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH HTKAIISFALCGFANLSSVAILLGGLGSMAPNRRHDIARFGLKAVAAGTLSNLMSATIAG HHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FFLAL HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]