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The map label for this gene is rffC [H]

Identifier: 157368416

GI number: 157368416

Start: 188770

End: 189501

Strand: Direct

Name: rffC [H]

Synonym: Spro_0167

Alternate gene names: 157368416

Gene position: 188770-189501 (Clockwise)

Preceding gene: 157368415

Following gene: 157368417

Centisome position: 3.46

GC content: 57.65

Gene sequence:

>732_bases
ATGCACGCCCACGCCAGTATTGAGCCATTAGCCTGGGAAACTGAGTTTTTCGCCCTTAATAGCGCCAAACTCAACTTCTC
TACGGCGGCTCCGATGCTCACTGAGGCCGAACTGGATGGCTACGCATTAGTGCAGGCCAAAATTCCGGCGCATCAGACTG
CTTTGGTGGACGGCTTGACCCGTTTGGGCTTCCAACTGGTTGAGGGTGAAGTCGATCTGGTGCTGAATATCGGCACGGAA
TGTGCATCACTTCATACCGAGGCTACGCAGGCCATTCGCCCGGCGGTACCGGCCGATATCCCGATGTTGCGCGCAGCGGC
AGCCGGTGTATTCACCGCCAGCCGTTTCCGCGCCCCCTGGTATCACGCCCAGGACAGCGGCCGCTTTTATGCTGAATGGA
TCGAAAAGGCGGTATTGGGAACCTTTGACCATCAATGCCTGCTGGTACTCGACGATACTGGGCAGCCGGAAGGCTTTGTC
AGCCTGCGCGAACTCGGTGGCTCGGAGGCCCGCATCGGTCTGCTGGCGGCGTTCCCCGGCGCAGCAGGCAAAGGAATTGG
CTCTCGATTAATGACGGCGGTTATTGCAGAGTGCCGCCAACGGTCACTGCAGCGTCTGCGGGTTGCGACCCAGTTCGGTA
ACATCGCCGCACTACGGCTCTATCAACGACAGGGTGCTGCTATTGAAAGCACCTCGTATTGGTTATACAGAGGAAGACAT
GATCCCATTTAA

Upstream 100 bases:

>100_bases
ATTGCCTGGCGTAACGGCTGGCTGGACGATGAGGGCGTGAAACGCGCCGCACAATCGTTGCTCAAAACCGGTTATGGAAA
ATATCTGCTGGATCTGCTGC

Downstream 100 bases:

>100_bases
CGCACCACCGGTTGTTGGCACTGAACTTGACTATATGCAGGCTGCGATGGGCAGTGGCAAGCTGTGTGGTGACGGTGGCT
TTACCCGTCGTTGCCAGCAG

Product: TDP-fucosamine acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MHAHASIEPLAWETEFFALNSAKLNFSTAAPMLTEAELDGYALVQAKIPAHQTALVDGLTRLGFQLVEGEVDLVLNIGTE
CASLHTEATQAIRPAVPADIPMLRAAAAGVFTASRFRAPWYHAQDSGRFYAEWIEKAVLGTFDHQCLLVLDDTGQPEGFV
SLRELGGSEARIGLLAAFPGAAGKGIGSRLMTAVIAECRQRSLQRLRVATQFGNIAALRLYQRQGAAIESTSYWLYRGRH
DPI

Sequences:

>Translated_243_residues
MHAHASIEPLAWETEFFALNSAKLNFSTAAPMLTEAELDGYALVQAKIPAHQTALVDGLTRLGFQLVEGEVDLVLNIGTE
CASLHTEATQAIRPAVPADIPMLRAAAAGVFTASRFRAPWYHAQDSGRFYAEWIEKAVLGTFDHQCLLVLDDTGQPEGFV
SLRELGGSEARIGLLAAFPGAAGKGIGSRLMTAVIAECRQRSLQRLRVATQFGNIAALRLYQRQGAAIESTSYWLYRGRH
DPI
>Mature_243_residues
MHAHASIEPLAWETEFFALNSAKLNFSTAAPMLTEAELDGYALVQAKIPAHQTALVDGLTRLGFQLVEGEVDLVLNIGTE
CASLHTEATQAIRPAVPADIPMLRAAAAGVFTASRFRAPWYHAQDSGRFYAEWIEKAVLGTFDHQCLLVLDDTGQPEGFV
SLRELGGSEARIGLLAAFPGAAGKGIGSRLMTAVIAECRQRSLQRLRVATQFGNIAALRLYQRQGAAIESTSYWLYRGRH
DPI

Specific function: Transaminase converting thymidine diphosphate(TDP)-4- keto-6-deoxy-D-glucose to TDP-4-amino-4,6-dideoxy-D-galactose, the immediate precursor of the ECA sugar TDP-Fuc4NAc [H]

COG id: COG0454

COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI145693203, Length=237, Percent_Identity=49.789029535865, Blast_Score=217, Evalue=4e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR012752
- InterPro:   IPR016181
- InterPro:   IPR002110
- InterPro:   IPR020683 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: NA

Molecular weight: Translated: 26408; Mature: 26408

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAHASIEPLAWETEFFALNSAKLNFSTAAPMLTEAELDGYALVQAKIPAHQTALVDGLT
CCCCCCCCCCEECEEEEEEECCEEECCCCCCCEEECCCCCEEEEEEECCCHHHHHHHHHH
RLGFQLVEGEVDLVLNIGTECASLHTEATQAIRPAVPADIPMLRAAAAGVFTASRFRAPW
HHCCEEECCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
YHAQDSGRFYAEWIEKAVLGTFDHQCLLVLDDTGQPEGFVSLRELGGSEARIGLLAAFPG
CCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCEEEEEEECCC
AAGKGIGSRLMTAVIAECRQRSLQRLRVATQFGNIAALRLYQRQGAAIESTSYWLYRGRH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCEEECCCEEEEECCC
DPI
CCC
>Mature Secondary Structure
MHAHASIEPLAWETEFFALNSAKLNFSTAAPMLTEAELDGYALVQAKIPAHQTALVDGLT
CCCCCCCCCCEECEEEEEEECCEEECCCCCCCEEECCCCCEEEEEEECCCHHHHHHHHHH
RLGFQLVEGEVDLVLNIGTECASLHTEATQAIRPAVPADIPMLRAAAAGVFTASRFRAPW
HHCCEEECCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
YHAQDSGRFYAEWIEKAVLGTFDHQCLLVLDDTGQPEGFVSLRELGGSEARIGLLAAFPG
CCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCEEEEEEECCC
AAGKGIGSRLMTAVIAECRQRSLQRLRVATQFGNIAALRLYQRQGAAIESTSYWLYRGRH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCEEECCCEEEEECCC
DPI
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1379743; 9278503; 8366065 [H]