| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is rmlA2 [H]
Identifier: 157368415
GI number: 157368415
Start: 187911
End: 188792
Strand: Direct
Name: rmlA2 [H]
Synonym: Spro_0166
Alternate gene names: 157368415
Gene position: 187911-188792 (Clockwise)
Preceding gene: 157368414
Following gene: 157368416
Centisome position: 3.45
GC content: 53.74
Gene sequence:
>882_bases ATGAAAGGTATTATTCTGGCGGGCGGTTCCGGCACACGCTTGCATCCGATTACCCGCGGCGTATCCAAACAGCTATTACC TATTTACGACAAGCCGATGATTTATTATCCACTGTCAGTTTTGATGCTGGCGGGGATCCGCGACATTTTAATCATCTCTA CCCCAGAAGATTTACCCTCGTTCAAACGCTTATTGGGCAGCGGCGAAGAGTTCGGCATTAACCTCAGTTATGCCGAACAA CCCAGTCCTGACGGCCTGGCGCAGGCATTTTTGATTGGCGAAGAATTCCTCGCCGGCGAGCCGAGCTGCCTGGTGCTGGG TGACAACATTTACTTTGGCCAGGGCTTTAGTCCGAAACTGAAGACGGTTGCCGCCCGTACGCAGGGCGCTACCGTGTTCG GTTATCAGGTAATGGATCCCGAGCGCTTTGGCGTGGTGGAGTTTGATGATAATTTCCGCGCGCTGTCGATCGAAGAAAAG CCGAAAGCGCCTAAATCCAATTGGGCGGTGACCGGGCTGTATTTCTACGACAGCCAGGTTGTGGAGTTCGCCAAACAGGT GAAACCTTCGGAGCGCGGCGAACTGGAGATCACCAGCATTAACCAGATGTATCTGGAGCGTGGTGAACTGACGGTTGAAC TGTTGGGGCGCGGTTTCGCCTGGCTGGATACCGGCACACATGACAGCCTGCTGGAAGCCAGCAGCTTTGTGCAGACGGTG GAAAAACGTCAGGGCTTTAAAATTGCCTGTCTGGAAGAAATTGCCTGGCGTAACGGCTGGCTGGACGATGAGGGCGTGAA ACGCGCCGCACAATCGTTGCTCAAAACCGGTTATGGAAAATATCTGCTGGATCTGCTGCATGCACGCCCACGCCAGTATT GA
Upstream 100 bases:
>100_bases CGTTCAGGACGGTTCCTATGCGGGTGAACGATTAGGTTTATCCGACTAAATTTAGCGAGGCCACCGCTTAAGCGGTAGCC CTGTGGATTCTGGAGTGAGT
Downstream 100 bases:
>100_bases GCCATTAGCCTGGGAAACTGAGTTTTTCGCCCTTAATAGCGCCAAACTCAACTTCTCTACGGCGGCTCCGATGCTCACTG AGGCCGAACTGGATGGCTAC
Product: glucose-1-phosphate thymidylyltransferase
Products: NA
Alternate protein names: G1P-TT 2; dTDP-glucose pyrophosphorylase 2; dTDP-glucose synthase 2 [H]
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLAGIRDILIISTPEDLPSFKRLLGSGEEFGINLSYAEQ PSPDGLAQAFLIGEEFLAGEPSCLVLGDNIYFGQGFSPKLKTVAARTQGATVFGYQVMDPERFGVVEFDDNFRALSIEEK PKAPKSNWAVTGLYFYDSQVVEFAKQVKPSERGELEITSINQMYLERGELTVELLGRGFAWLDTGTHDSLLEASSFVQTV EKRQGFKIACLEEIAWRNGWLDDEGVKRAAQSLLKTGYGKYLLDLLHARPRQY
Sequences:
>Translated_293_residues MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLAGIRDILIISTPEDLPSFKRLLGSGEEFGINLSYAEQ PSPDGLAQAFLIGEEFLAGEPSCLVLGDNIYFGQGFSPKLKTVAARTQGATVFGYQVMDPERFGVVEFDDNFRALSIEEK PKAPKSNWAVTGLYFYDSQVVEFAKQVKPSERGELEITSINQMYLERGELTVELLGRGFAWLDTGTHDSLLEASSFVQTV EKRQGFKIACLEEIAWRNGWLDDEGVKRAAQSLLKTGYGKYLLDLLHARPRQY >Mature_293_residues MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLAGIRDILIISTPEDLPSFKRLLGSGEEFGINLSYAEQ PSPDGLAQAFLIGEEFLAGEPSCLVLGDNIYFGQGFSPKLKTVAARTQGATVFGYQVMDPERFGVVEFDDNFRALSIEEK PKAPKSNWAVTGLYFYDSQVVEFAKQVKPSERGELEITSINQMYLERGELTVELLGRGFAWLDTGTHDSLLEASSFVQTV EKRQGFKIACLEEIAWRNGWLDDEGVKRAAQSLLKTGYGKYLLDLLHARPRQY
Specific function: Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis [H]
COG id: COG1209
COG function: function code M; dTDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-1-phosphate thymidylyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI11761619, Length=253, Percent_Identity=26.0869565217391, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI11761621, Length=253, Percent_Identity=26.0869565217391, Blast_Score=72, Evalue=6e-13, Organism=Escherichia coli, GI1790224, Length=293, Percent_Identity=89.419795221843, Blast_Score=543, Evalue=1e-156, Organism=Escherichia coli, GI1788351, Length=284, Percent_Identity=64.7887323943662, Blast_Score=395, Evalue=1e-111, Organism=Caenorhabditis elegans, GI133931050, Length=240, Percent_Identity=24.5833333333333, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320148, Length=254, Percent_Identity=27.5590551181102, Blast_Score=83, Evalue=5e-17, Organism=Drosophila melanogaster, GI21355443, Length=250, Percent_Identity=25.2, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24644084, Length=250, Percent_Identity=25.2, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005907 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.24 [H]
Molecular weight: Translated: 32613; Mature: 32613
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLAGIRDILIISTPEDLPS CCCEEEECCCCCEECHHHHCHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHH FKRLLGSGEEFGINLSYAEQPSPDGLAQAFLIGEEFLAGEPSCLVLGDNIYFGQGFSPKL HHHHHCCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCCCHH KTVAARTQGATVFGYQVMDPERFGVVEFDDNFRALSIEEKPKAPKSNWAVTGLYFYDSQV HHHHHHCCCCEEEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCEEEEEEEEECHHH VEFAKQVKPSERGELEITSINQMYLERGELTVELLGRGFAWLDTGTHDSLLEASSFVQTV HHHHHHCCCCCCCCEEEEEHHHHHHHCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHH EKRQGFKIACLEEIAWRNGWLDDEGVKRAAQSLLKTGYGKYLLDLLHARPRQY HHHCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC >Mature Secondary Structure MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLAGIRDILIISTPEDLPS CCCEEEECCCCCEECHHHHCHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHH FKRLLGSGEEFGINLSYAEQPSPDGLAQAFLIGEEFLAGEPSCLVLGDNIYFGQGFSPKL HHHHHCCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCCCHH KTVAARTQGATVFGYQVMDPERFGVVEFDDNFRALSIEEKPKAPKSNWAVTGLYFYDSQV HHHHHHCCCCEEEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCEEEEEEEEECHHH VEFAKQVKPSERGELEITSINQMYLERGELTVELLGRGFAWLDTGTHDSLLEASSFVQTV HHHHHHCCCCCCCCEEEEEHHHHHHHCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHH EKRQGFKIACLEEIAWRNGWLDDEGVKRAAQSLLKTGYGKYLLDLLHARPRQY HHHCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503; 7559340 [H]