| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is fabG [H]
Identifier: 157368370
GI number: 157368370
Start: 129225
End: 129986
Strand: Reverse
Name: fabG [H]
Synonym: Spro_0121
Alternate gene names: 157368370
Gene position: 129986-129225 (Counterclockwise)
Preceding gene: 157368371
Following gene: 157368369
Centisome position: 2.39
GC content: 60.5
Gene sequence:
>762_bases ATGTTCTCTGATTTAACCAACAAACGCGTGTTGATCACCGGTTCCACCGCCGGTATCGGATTGGCAACCGCCGCCCTGTT CGCCCAACACGGCGCCAGGGTGGGGATTAACGGCATGCGCAGCGAACCGCCGGCAGAAATCGCCGCCTTCCCCGGCGAAT GCGCGTTCTTCTCCGCCGACCTATCGCGTTCCGCCGGTTGTGAAGCGTTGGTGGAAGCCTTTGTCGCCCGCTTCGGCGGC ATCGACATCCTGATCAATAACGCCGGTGGGCTGGGCGGGCGCAACGGGCTGGAAGCGATAGACGACGAGTTCTTTGATCG AGTGATGGATCTGAACTGCCGCTCGGCGCTGATGGTAACCAAATTCGCTATCCCTCACCTGCGCGCTTCGGCACGCGAGA GCGGCGCTACCGCCAGCGTGATCAGCACCGGCTCCATCGCTGCACGCGAAGGTGGCGGCATCGGCGCCGGTCTGTATGCC AGCGCCAAAGCCTGGTTGCACAATATTCATCGCAACTGGGTGAAGGAGTTCACCCAGGACAACATCCGTTTCAATATTGT GTCGCCGGGCAGCATCGACACCGCCTTCCATCAGGGTAAAAGTGAAGAAGTGCTGGGCAAGATGTGCGCCTCGATCCCGA TGGGCCGCTTTGGTCGCAGCGAGGAAGTGGCACCCACTTACCTGTTCCTGGCATCGCATAACTGCAGCGGCTACATCACC GGGCAGATTATCGACGTCAACGGCGGGCAGATTGCGCCCTAA
Upstream 100 bases:
>100_bases CATCCTGCTCGGCATCATTGTTATCGCGCTGTTCCCGGCGCTCACCACCTGGCTGCCCACGCGGCTGGGCTACTGATTTT CTCAAGCAAGGAGTCATACC
Downstream 100 bases:
>100_bases GGGTCTGTGACTCACTTTCGGCCGCGTGATAAAGTCAGGGTAATGGGCTAATGCAAAACGGGAATGTAATGGCGAATATA CGTGATGTGGCACGTCATGC
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MFSDLTNKRVLITGSTAGIGLATAALFAQHGARVGINGMRSEPPAEIAAFPGECAFFSADLSRSAGCEALVEAFVARFGG IDILINNAGGLGGRNGLEAIDDEFFDRVMDLNCRSALMVTKFAIPHLRASARESGATASVISTGSIAAREGGGIGAGLYA SAKAWLHNIHRNWVKEFTQDNIRFNIVSPGSIDTAFHQGKSEEVLGKMCASIPMGRFGRSEEVAPTYLFLASHNCSGYIT GQIIDVNGGQIAP
Sequences:
>Translated_253_residues MFSDLTNKRVLITGSTAGIGLATAALFAQHGARVGINGMRSEPPAEIAAFPGECAFFSADLSRSAGCEALVEAFVARFGG IDILINNAGGLGGRNGLEAIDDEFFDRVMDLNCRSALMVTKFAIPHLRASARESGATASVISTGSIAAREGGGIGAGLYA SAKAWLHNIHRNWVKEFTQDNIRFNIVSPGSIDTAFHQGKSEEVLGKMCASIPMGRFGRSEEVAPTYLFLASHNCSGYIT GQIIDVNGGQIAP >Mature_253_residues MFSDLTNKRVLITGSTAGIGLATAALFAQHGARVGINGMRSEPPAEIAAFPGECAFFSADLSRSAGCEALVEAFVARFGG IDILINNAGGLGGRNGLEAIDDEFFDRVMDLNCRSALMVTKFAIPHLRASARESGATASVISTGSIAAREGGGIGAGLYA SAKAWLHNIHRNWVKEFTQDNIRFNIVSPGSIDTAFHQGKSEEVLGKMCASIPMGRFGRSEEVAPTYLFLASHNCSGYIT GQIIDVNGGQIAP
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=270, Percent_Identity=30.3703703703704, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=30.6772908366534, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI40254992, Length=251, Percent_Identity=30.2788844621514, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI66933014, Length=251, Percent_Identity=28.2868525896414, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI5031737, Length=250, Percent_Identity=27.6, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI126723750, Length=256, Percent_Identity=29.296875, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI7705925, Length=251, Percent_Identity=29.8804780876494, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI10190704, Length=258, Percent_Identity=30.2325581395349, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI59889578, Length=210, Percent_Identity=28.0952380952381, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI33667109, Length=198, Percent_Identity=28.2828282828283, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI126723191, Length=185, Percent_Identity=30.2702702702703, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1787335, Length=244, Percent_Identity=33.1967213114754, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1789378, Length=254, Percent_Identity=30.7086614173228, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1789208, Length=252, Percent_Identity=31.7460317460317, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI87082100, Length=260, Percent_Identity=30.7692307692308, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI2367175, Length=246, Percent_Identity=30.0813008130081, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=31.2, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1790717, Length=258, Percent_Identity=26.7441860465116, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786812, Length=257, Percent_Identity=29.1828793774319, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1788459, Length=244, Percent_Identity=27.4590163934426, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI87082160, Length=259, Percent_Identity=26.2548262548263, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI2367365, Length=248, Percent_Identity=29.8387096774194, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1787526, Length=259, Percent_Identity=25.8687258687259, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI1787820, Length=213, Percent_Identity=25.8215962441315, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17562910, Length=268, Percent_Identity=36.9402985074627, Blast_Score=127, Evalue=5e-30, Organism=Caenorhabditis elegans, GI17544670, Length=263, Percent_Identity=32.6996197718631, Blast_Score=122, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17560332, Length=270, Percent_Identity=33.3333333333333, Blast_Score=120, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17551412, Length=270, Percent_Identity=33.7037037037037, Blast_Score=119, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=33.969465648855, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17538480, Length=270, Percent_Identity=32.962962962963, Blast_Score=117, Evalue=5e-27, Organism=Caenorhabditis elegans, GI17562904, Length=266, Percent_Identity=33.4586466165414, Blast_Score=117, Evalue=6e-27, Organism=Caenorhabditis elegans, GI17562906, Length=268, Percent_Identity=32.8358208955224, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17562908, Length=269, Percent_Identity=32.3420074349442, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17560150, Length=260, Percent_Identity=32.6923076923077, Blast_Score=114, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17565030, Length=271, Percent_Identity=33.9483394833948, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17562990, Length=261, Percent_Identity=32.183908045977, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17560220, Length=267, Percent_Identity=34.4569288389513, Blast_Score=111, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17563726, Length=261, Percent_Identity=32.5670498084291, Blast_Score=109, Evalue=1e-24, Organism=Caenorhabditis elegans, GI193204405, Length=272, Percent_Identity=33.4558823529412, Blast_Score=107, Evalue=6e-24, Organism=Caenorhabditis elegans, GI25147288, Length=242, Percent_Identity=31.8181818181818, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI72000259, Length=260, Percent_Identity=31.1538461538462, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI71994600, Length=256, Percent_Identity=31.640625, Blast_Score=103, Evalue=7e-23, Organism=Caenorhabditis elegans, GI17560676, Length=252, Percent_Identity=32.9365079365079, Blast_Score=103, Evalue=9e-23, Organism=Caenorhabditis elegans, GI17531453, Length=262, Percent_Identity=33.206106870229, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=30.5660377358491, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17555706, Length=249, Percent_Identity=30.5220883534137, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=29.7619047619048, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71994604, Length=253, Percent_Identity=27.2727272727273, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17536025, Length=257, Percent_Identity=31.1284046692607, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17536651, Length=254, Percent_Identity=29.9212598425197, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI115534694, Length=253, Percent_Identity=27.6679841897233, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17561272, Length=240, Percent_Identity=30, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17538182, Length=251, Percent_Identity=26.2948207171315, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323882, Length=253, Percent_Identity=26.8774703557312, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI23397609, Length=254, Percent_Identity=34.6456692913386, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI21355319, Length=254, Percent_Identity=30.3149606299213, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI28571526, Length=271, Percent_Identity=30.6273062730627, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24644339, Length=257, Percent_Identity=31.9066147859922, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI21357041, Length=255, Percent_Identity=32.156862745098, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI24639444, Length=247, Percent_Identity=27.9352226720648, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24643142, Length=252, Percent_Identity=29.7619047619048, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI17737361, Length=254, Percent_Identity=25.1968503937008, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26599; Mature: 26599
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSDLTNKRVLITGSTAGIGLATAALFAQHGARVGINGMRSEPPAEIAAFPGECAFFSAD CCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEECCCCCCCCCCHHHHCCCCCCEEEECC LSRSAGCEALVEAFVARFGGIDILINNAGGLGGRNGLEAIDDEFFDRVMDLNCRSALMVT CCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH KFAIPHLRASARESGATASVISTGSIAAREGGGIGAGLYASAKAWLHNIHRNWVKEFTQD HHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC NIRFNIVSPGSIDTAFHQGKSEEVLGKMCASIPMGRFGRSEEVAPTYLFLASHNCSGYIT CCEEEEECCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEE GQIIDVNGGQIAP EEEEECCCCCCCC >Mature Secondary Structure MFSDLTNKRVLITGSTAGIGLATAALFAQHGARVGINGMRSEPPAEIAAFPGECAFFSAD CCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEECCCCCCCCCCHHHHCCCCCCEEEECC LSRSAGCEALVEAFVARFGGIDILINNAGGLGGRNGLEAIDDEFFDRVMDLNCRSALMVT CCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH KFAIPHLRASARESGATASVISTGSIAAREGGGIGAGLYASAKAWLHNIHRNWVKEFTQD HHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC NIRFNIVSPGSIDTAFHQGKSEEVLGKMCASIPMGRFGRSEEVAPTYLFLASHNCSGYIT CCEEEEECCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEE GQIIDVNGGQIAP EEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]