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The map label for this gene is ykgB

Identifier: 157159807

GI number: 157159807

Start: 368323

End: 368916

Strand: Reverse

Name: ykgB

Synonym: EcHS_A0355

Alternate gene names: 157159807

Gene position: 368916-368323 (Counterclockwise)

Preceding gene: 157159809

Following gene: 157159805

Centisome position: 7.94

GC content: 44.95

Gene sequence:

>594_bases
ATGGAAAAATACCTGCACCTGTTAAGTCGGGGAGATAAAATTGGCCTGACATTGATTCGTCTGAGTATTGCAATTGTTTT
TATGTGGATTGGGTTATTAAAGTTTGTCCCTTACGAGGCAGACAGCATTACACCATTCGTCGCAAACAGTCCACTAATGT
CGTTCTTTTATGAACACCCGGAAGACTATAAACAGTATCTGACTCACGAAGGCGAATACAAACCAGAAGCAAGGGCATGG
CAAACGGCCAATAATACCTATGGTTTTTCCAACGGTCTTGGCGTCGTGGAGGTGATTATTGCTCTGCTGGTTTTGGCTAA
TCCTGTCAATCGCTGGTTAGGTTTATTGGGAGGACTGATGGCATTTACCACGCCGCTGGTAACACTCTCATTTTTAATCA
CCACCCCGGAGGCATGGGTACCCGCATTGGGTGACGCTCATCATGGTTTCCCTTATTTATCCGGTGCTGGTCGCCTGGTA
TTGAAAGATACTCTGATGCTGGCAGGTGCTGTCATGATAATGGCAGATTCGGCGCGGGAAATTCTTAAACAACGCAGTAA
TGAATCCAGTTCAACGTTAAAAACTGAATATTGA

Upstream 100 bases:

>100_bases
TAGCCAGAAAATATAATGCTTCATCCTGGAAAGTCACATCGATGCGAATTGATAATAATTCAACCGCAACAGCAGTATTG
TATAAATAAGGATGTTCACA

Downstream 100 bases:

>100_bases
TAATCCGAACACTGTCTGTTGTTCACTTTTTCAGGCGTCAGGCCCCCTTTCTGATGATGAAGCCTGACGCCATATTACCG
GAGATATGACAGAGTGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MEKYLHLLSRGDKIGLTLIRLSIAIVFMWIGLLKFVPYEADSITPFVANSPLMSFFYEHPEDYKQYLTHEGEYKPEARAW
QTANNTYGFSNGLGVVEVIIALLVLANPVNRWLGLLGGLMAFTTPLVTLSFLITTPEAWVPALGDAHHGFPYLSGAGRLV
LKDTLMLAGAVMIMADSAREILKQRSNESSSTLKTEY

Sequences:

>Translated_197_residues
MEKYLHLLSRGDKIGLTLIRLSIAIVFMWIGLLKFVPYEADSITPFVANSPLMSFFYEHPEDYKQYLTHEGEYKPEARAW
QTANNTYGFSNGLGVVEVIIALLVLANPVNRWLGLLGGLMAFTTPLVTLSFLITTPEAWVPALGDAHHGFPYLSGAGRLV
LKDTLMLAGAVMIMADSAREILKQRSNESSSTLKTEY
>Mature_197_residues
MEKYLHLLSRGDKIGLTLIRLSIAIVFMWIGLLKFVPYEADSITPFVANSPLMSFFYEHPEDYKQYLTHEGEYKPEARAW
QTANNTYGFSNGLGVVEVIIALLVLANPVNRWLGLLGGLMAFTTPLVTLSFLITTPEAWVPALGDAHHGFPYLSGAGRLV
LKDTLMLAGAVMIMADSAREILKQRSNESSSTLKTEY

Specific function: Unknown

COG id: COG3059

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081715, Length=197, Percent_Identity=100, Blast_Score=403, Evalue=1e-114,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKGB_ECOLI (P75685)

Other databases:

- EMBL:   U73857
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   E64756
- RefSeq:   AP_000956.1
- RefSeq:   NP_414835.2
- ProteinModelPortal:   P75685
- STRING:   P75685
- EnsemblBacteria:   EBESCT00000004639
- EnsemblBacteria:   EBESCT00000016418
- GeneID:   944974
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5038
- KEGG:   eco:b0301
- EchoBASE:   EB3349
- EcoGene:   EG13579
- eggNOG:   COG3059
- GeneTree:   EBGT00050000010469
- HOGENOM:   HBG353491
- OMA:   FTMEKYL
- ProtClustDB:   CLSK872380
- BioCyc:   EcoCyc:G6171-MONOMER
- Genevestigator:   P75685
- InterPro:   IPR007339

Pfam domain/function: PF04224 DUF417

EC number: NA

Molecular weight: Translated: 21900; Mature: 21900

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf051bb0)-; HASH(0x12046804)-; HASH(0x11fb441c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKYLHLLSRGDKIGLTLIRLSIAIVFMWIGLLKFVPYEADSITPFVANSPLMSFFYEHP
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHCC
EDYKQYLTHEGEYKPEARAWQTANNTYGFSNGLGVVEVIIALLVLANPVNRWLGLLGGLM
HHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHH
AFTTPLVTLSFLITTPEAWVPALGDAHHGFPYLSGAGRLVLKDTLMLAGAVMIMADSARE
HHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ILKQRSNESSSTLKTEY
HHHHHCCCCCCCCCCCH
>Mature Secondary Structure
MEKYLHLLSRGDKIGLTLIRLSIAIVFMWIGLLKFVPYEADSITPFVANSPLMSFFYEHP
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHCC
EDYKQYLTHEGEYKPEARAWQTANNTYGFSNGLGVVEVIIALLVLANPVNRWLGLLGGLM
HHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHH
AFTTPLVTLSFLITTPEAWVPALGDAHHGFPYLSGAGRLVLKDTLMLAGAVMIMADSARE
HHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ILKQRSNESSSTLKTEY
HHHHHCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503