Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156978228

Identifier: 156978228

GI number: 156978228

Start: 2108797

End: 2109807

Strand: Direct

Name: 156978228

Synonym: VIBHAR_07033

Alternate gene names: NA

Gene position: 2108797-2109807 (Clockwise)

Preceding gene: 156978227

Following gene: 156978229

Centisome position: 95.68

GC content: 47.87

Gene sequence:

>1011_bases
ATGTGGACCTTCGAAAGCCTGTTTCAAAGTCGTTCTGAGCGCAATGAAGCACTGCGTGTCGCCCTTACTGTGACAATTTG
TATGGTGCTAGGCAAACTGCTGAACCTTGATTCTCCAGTTTATCTGGCGCTGTACCCAACCATCATCATGACCAAGAACA
AAGACTACTCTTGGCTTGGTCTGCTTCGCACCTTGCTACCTACGTTATTAGCAGCAAGTACAGCATTGGTGGTAACTGAA
GTGTTTTCACAGCATCCGTTTGTGGTGTGGACCATTAGCTTGTTCTTCTTCGACTTTATGCGCCGCAGAGCGACCACGCC
GCCGAAGAAAGGTCAGATGCTAATGCCAACCTTTAACTGGATTTTGATTGTGGTGTTTGCTCAGCACACCACCATGGACA
TGCCGATGCGCATTCATGAAATCTTGCTATCGATGCTGATTACCATGGTCGTCGCAAAAACCATGGTAGCTCTATTCCCT
GTTGAACGTGGCGGCAAACCACCAGCATTTGAAGAAGAGCCTGTTACGTTTGAGAACCGAGCGATTTCACTCGCGTTGAT
TGGTCTTGGTGTGGCGTTCTTAATGATTGTCGACATCATCTCAGCAACGTTTTGTTTGGTGCCTGTGATTGCCGCAGCAA
CGCAAACCACACACAAAAGCTTTATCGACGTGGTTGACCGCCGTTTTCAAACTCAAGTGGGCGGCTGTGCATTAGCTTCA
GTGTTCACCTTTTTGATGGCTGGGCATCAGTCCACGTTCGGTTACTACACCATCGTATTAGGTCTGCTTGCCTTTATGAT
CACCGCATCAATGGCAAAAGCGAAAGGTCCAGCCAAAGACGTTCATGCTGATGCGTTATTAGCGACCATGCTGCCGATTC
AACTCTACATGACCAGTAAAGAGTTAGGCTTGGAAAGCACTTTCCTTCGAGCTTGGGAGCTTACCGTGACTTTGTTTGTA
CTGTGGGCGTTATACCATTTCACGCACAAACCAGAAAAAGCCCAAGCCTAA

Upstream 100 bases:

>100_bases
AGTGTGATCGTTGAAAGCGGCAATCCAATCATGGATGTCATTGGCTCAGCTTGGATTCACTTGGTAGCGATGTTCCGCTA
CATCTACTAGGGGGTGAACC

Downstream 100 bases:

>100_bases
TCATGCCATCGCCTTAAGTGCTCAATACTTAAGGCGACTCTTGTTCTTATCGCGCTCATTTCATTGCGCTGTCTGTACCA
ATTTCCATTTCAACCTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MWTFESLFQSRSERNEALRVALTVTICMVLGKLLNLDSPVYLALYPTIIMTKNKDYSWLGLLRTLLPTLLAASTALVVTE
VFSQHPFVVWTISLFFFDFMRRRATTPPKKGQMLMPTFNWILIVVFAQHTTMDMPMRIHEILLSMLITMVVAKTMVALFP
VERGGKPPAFEEEPVTFENRAISLALIGLGVAFLMIVDIISATFCLVPVIAAATQTTHKSFIDVVDRRFQTQVGGCALAS
VFTFLMAGHQSTFGYYTIVLGLLAFMITASMAKAKGPAKDVHADALLATMLPIQLYMTSKELGLESTFLRAWELTVTLFV
LWALYHFTHKPEKAQA

Sequences:

>Translated_336_residues
MWTFESLFQSRSERNEALRVALTVTICMVLGKLLNLDSPVYLALYPTIIMTKNKDYSWLGLLRTLLPTLLAASTALVVTE
VFSQHPFVVWTISLFFFDFMRRRATTPPKKGQMLMPTFNWILIVVFAQHTTMDMPMRIHEILLSMLITMVVAKTMVALFP
VERGGKPPAFEEEPVTFENRAISLALIGLGVAFLMIVDIISATFCLVPVIAAATQTTHKSFIDVVDRRFQTQVGGCALAS
VFTFLMAGHQSTFGYYTIVLGLLAFMITASMAKAKGPAKDVHADALLATMLPIQLYMTSKELGLESTFLRAWELTVTLFV
LWALYHFTHKPEKAQA
>Mature_336_residues
MWTFESLFQSRSERNEALRVALTVTICMVLGKLLNLDSPVYLALYPTIIMTKNKDYSWLGLLRTLLPTLLAASTALVVTE
VFSQHPFVVWTISLFFFDFMRRRATTPPKKGQMLMPTFNWILIVVFAQHTTMDMPMRIHEILLSMLITMVVAKTMVALFP
VERGGKPPAFEEEPVTFENRAISLALIGLGVAFLMIVDIISATFCLVPVIAAATQTTHKSFIDVVDRRFQTQVGGCALAS
VFTFLMAGHQSTFGYYTIVLGLLAFMITASMAKAKGPAKDVHADALLATMLPIQLYMTSKELGLESTFLRAWELTVTLFV
LWALYHFTHKPEKAQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37631; Mature: 37631

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWTFESLFQSRSERNEALRVALTVTICMVLGKLLNLDSPVYLALYPTIIMTKNKDYSWLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEEECCCCCHHHH
LLRTLLPTLLAASTALVVTEVFSQHPFVVWTISLFFFDFMRRRATTPPKKGQMLMPTFNW
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHH
ILIVVFAQHTTMDMPMRIHEILLSMLITMVVAKTMVALFPVERGGKPPAFEEEPVTFENR
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
AISLALIGLGVAFLMIVDIISATFCLVPVIAAATQTTHKSFIDVVDRRFQTQVGGCALAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
VFTFLMAGHQSTFGYYTIVLGLLAFMITASMAKAKGPAKDVHADALLATMLPIQLYMTSK
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEHH
ELGLESTFLRAWELTVTLFVLWALYHFTHKPEKAQA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MWTFESLFQSRSERNEALRVALTVTICMVLGKLLNLDSPVYLALYPTIIMTKNKDYSWLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEEECCCCCHHHH
LLRTLLPTLLAASTALVVTEVFSQHPFVVWTISLFFFDFMRRRATTPPKKGQMLMPTFNW
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHH
ILIVVFAQHTTMDMPMRIHEILLSMLITMVVAKTMVALFPVERGGKPPAFEEEPVTFENR
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
AISLALIGLGVAFLMIVDIISATFCLVPVIAAATQTTHKSFIDVVDRRFQTQVGGCALAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
VFTFLMAGHQSTFGYYTIVLGLLAFMITASMAKAKGPAKDVHADALLATMLPIQLYMTSK
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEHH
ELGLESTFLRAWELTVTLFVLWALYHFTHKPEKAQA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA