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The map label for this gene is rimK [H]

Identifier: 156977939

GI number: 156977939

Start: 1866972

End: 1867400

Strand: Direct

Name: rimK [H]

Synonym: VIBHAR_06735

Alternate gene names: 156977939

Gene position: 1866972-1867400 (Clockwise)

Preceding gene: 156977938

Following gene: 156977941

Centisome position: 84.71

GC content: 48.02

Gene sequence:

>429_bases
ATGAATCAGAAAATGATCATTGGGAACGCCGAAGCAATTTGCTTACCTGAGTTAGGGATTACTCATCTTGAAGCGCGTAT
TGATACAGGCGCACAGACTTCTTCTCTGCACGTAGCTAACCTAGAGTGCACAGAGCAAGACGGTCAGTCATACGTAGAAT
TCGATCTACACCCAGATGTTTACCACTTAGAACAAGTGGTTCGCTGTAAAGCTCCACTGAAGGCGAACCGCAAAGTGAAA
TCATCAAACGGAACGTTCGAGCACCGCTGCGTGATCACGACGATGCTACGCATGGGCGACCAAGAGTGGCCTATCGACAT
CACGCTGACTAACCGTGAAAAGATGACCTACATGATGTTGCTAGGTCGTCAGGGTATGGCAGACAAAGTTCTGGTAGACC
CGAGCCAATCTCACTTATTGGCTCCATAA

Upstream 100 bases:

>100_bases
AAAACCAAACGCTAACCGTACACGCGGTAAAGGCTGATAATTGTTTGAGTGAGAGCCTATAAACCGGGCTCTCTTTATCA
CTCATCGCTAGGATGACACT

Downstream 100 bases:

>100_bases
TCCCCGTAGCTTCAGATGAGCGAACTCCGTGGTCGCTCATCTGGCTCTTAAATACAATTCTAACTGCCCTTCTCCTGTTT
ATCGTTCTTTCTTCTCAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MNQKMIIGNAEAICLPELGITHLEARIDTGAQTSSLHVANLECTEQDGQSYVEFDLHPDVYHLEQVVRCKAPLKANRKVK
SSNGTFEHRCVITTMLRMGDQEWPIDITLTNREKMTYMMLLGRQGMADKVLVDPSQSHLLAP

Sequences:

>Translated_142_residues
MNQKMIIGNAEAICLPELGITHLEARIDTGAQTSSLHVANLECTEQDGQSYVEFDLHPDVYHLEQVVRCKAPLKANRKVK
SSNGTFEHRCVITTMLRMGDQEWPIDITLTNREKMTYMMLLGRQGMADKVLVDPSQSHLLAP
>Mature_142_residues
MNQKMIIGNAEAICLPELGITHLEARIDTGAQTSSLHVANLECTEQDGQSYVEFDLHPDVYHLEQVVRCKAPLKANRKVK
SSNGTFEHRCVITTMLRMGDQEWPIDITLTNREKMTYMMLLGRQGMADKVLVDPSQSHLLAP

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: COG4067

COG function: function code O; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR008503
- InterPro:   IPR009007
- InterPro:   IPR004666 [H]

Pfam domain/function: PF05618 DUF785; PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 15980; Mature: 15980

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQKMIIGNAEAICLPELGITHLEARIDTGAQTSSLHVANLECTEQDGQSYVEFDLHPDV
CCCEEEECCCCEEEECCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCEEEEEECCCCH
YHLEQVVRCKAPLKANRKVKSSNGTFEHRCVITTMLRMGDQEWPIDITLTNREKMTYMML
HHHHHHHHHCCCCCCCCEEECCCCCEEHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEE
LGRQGMADKVLVDPSQSHLLAP
ECCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MNQKMIIGNAEAICLPELGITHLEARIDTGAQTSSLHVANLECTEQDGQSYVEFDLHPDV
CCCEEEECCCCEEEECCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCEEEEEECCCCH
YHLEQVVRCKAPLKANRKVKSSNGTFEHRCVITTMLRMGDQEWPIDITLTNREKMTYMML
HHHHHHHHHCCCCCCCCEEECCCCCEEHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEE
LGRQGMADKVLVDPSQSHLLAP
ECCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA