| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977908
Identifier: 156977908
GI number: 156977908
Start: 1835908
End: 1836993
Strand: Direct
Name: 156977908
Synonym: VIBHAR_06701
Alternate gene names: NA
Gene position: 1835908-1836993 (Clockwise)
Preceding gene: 156977907
Following gene: 156977913
Centisome position: 83.3
GC content: 47.7
Gene sequence:
>1086_bases ATGCGTATCAGACCTATCAGCTTAGCCGTGTTGCTCTCCTGTTCACTGGCTTTTCAGGCGCAAGCCTCTCAAGAGGCACC GGTTTTAACCTATTCACAGTCCGCACAGTTGATCAAAGATACGTACGAATCGCAGCTATATACCTTGCCTGCGTTTCGAG AGGGGCATTTCGGCCTTCGTATGTATCGCCAAACGTTAAATGACAAGTATCTACCCGCCGTTTGGACAGACATGGCACAA GTCGCGAACCGTCTCAATCATTTTGCCAATGAAGTCACTGCACCCGAGCAAATTTTTCTCTACTCAGAAGCACGTTTAGC CACTTACCACGATAAAGAAGACGAGCGAAGCCAACGTCGCTACACCGTTACCAAGCACCAACCAGAATACCTCTACTTAG GCATCGATCTGATTGGAGCAATGGCAAGAGCGGACGAGTACGGCTTAAAGCACAAACAAGACAAATCGCTAAGGAGTGTT TTACGTCGATACGATTTCGCACGCTACGCCACTGACCCAGAGATGATAGAAGCTTGGGCGGCGCAATTGGCGAACCAAGT CTACTGGCTACGTCAGCTCGGCGAACAAGATGTGGTCAATGCATTTACCGATGCATTTCGCACGACCTACCCAGACAACC AAGACAAAAAACTGTCACCGCAGCAATACAGTAATAAGATCTACGGTATGACACACATTATTTTGGGTGATTCGCAGTAT TACCAAAAACAGGTGAATGAAGCTGACCATCAGTGGATTTATGACTACTTCCGCGACAATATCGACACCATCATTTTGCG TTCCAAAGAGGATGTAATTGCCGAGGTCGGGATTTCATTTCTCCTTGCGGGGTTGGATAGTGACCCAGTCGTCGAAAAAA CTCGTCAAGCAATCCAAAGTGCCATTAATACGCAACAAGGGATGATCCCTTCCGTGGAAGGGGACTACGACTTGAAATAT GGTGAACACCGCAATGTGTTGGCCATCATGCTGCTGGATTGGCAAGGTGTACACCAAGCCCCAACAATACAAAACCAGCC CCAAGTGTTTGAGTCTCTGCCTTATGGGTTAGTGTCAAAGCATTGA
Upstream 100 bases:
>100_bases GACTTTCCGCCATATCGTGACCAACTATTGACTGAGTCATTACATATCAAAATTGCATTAATGCTAGGCTTGAATCTTGG CTCCCAATCGGAATGTGTTT
Downstream 100 bases:
>100_bases TATCAACGCAGGTTACTGGATCGAATGGGCAGGCTTAAAAGCTTTACTTTTCAACATTTGCTCGTATCGAACCAATCGAA AATCTTGGAACCCCTGCATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MRIRPISLAVLLSCSLAFQAQASQEAPVLTYSQSAQLIKDTYESQLYTLPAFREGHFGLRMYRQTLNDKYLPAVWTDMAQ VANRLNHFANEVTAPEQIFLYSEARLATYHDKEDERSQRRYTVTKHQPEYLYLGIDLIGAMARADEYGLKHKQDKSLRSV LRRYDFARYATDPEMIEAWAAQLANQVYWLRQLGEQDVVNAFTDAFRTTYPDNQDKKLSPQQYSNKIYGMTHIILGDSQY YQKQVNEADHQWIYDYFRDNIDTIILRSKEDVIAEVGISFLLAGLDSDPVVEKTRQAIQSAINTQQGMIPSVEGDYDLKY GEHRNVLAIMLLDWQGVHQAPTIQNQPQVFESLPYGLVSKH
Sequences:
>Translated_361_residues MRIRPISLAVLLSCSLAFQAQASQEAPVLTYSQSAQLIKDTYESQLYTLPAFREGHFGLRMYRQTLNDKYLPAVWTDMAQ VANRLNHFANEVTAPEQIFLYSEARLATYHDKEDERSQRRYTVTKHQPEYLYLGIDLIGAMARADEYGLKHKQDKSLRSV LRRYDFARYATDPEMIEAWAAQLANQVYWLRQLGEQDVVNAFTDAFRTTYPDNQDKKLSPQQYSNKIYGMTHIILGDSQY YQKQVNEADHQWIYDYFRDNIDTIILRSKEDVIAEVGISFLLAGLDSDPVVEKTRQAIQSAINTQQGMIPSVEGDYDLKY GEHRNVLAIMLLDWQGVHQAPTIQNQPQVFESLPYGLVSKH >Mature_361_residues MRIRPISLAVLLSCSLAFQAQASQEAPVLTYSQSAQLIKDTYESQLYTLPAFREGHFGLRMYRQTLNDKYLPAVWTDMAQ VANRLNHFANEVTAPEQIFLYSEARLATYHDKEDERSQRRYTVTKHQPEYLYLGIDLIGAMARADEYGLKHKQDKSLRSV LRRYDFARYATDPEMIEAWAAQLANQVYWLRQLGEQDVVNAFTDAFRTTYPDNQDKKLSPQQYSNKIYGMTHIILGDSQY YQKQVNEADHQWIYDYFRDNIDTIILRSKEDVIAEVGISFLLAGLDSDPVVEKTRQAIQSAINTQQGMIPSVEGDYDLKY GEHRNVLAIMLLDWQGVHQAPTIQNQPQVFESLPYGLVSKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41712; Mature: 41712
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRPISLAVLLSCSLAFQAQASQEAPVLTYSQSAQLIKDTYESQLYTLPAFREGHFGLR CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHEEECCCCCCCCHHHH MYRQTLNDKYLPAVWTDMAQVANRLNHFANEVTAPEQIFLYSEARLATYHDKEDERSQRR HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHEECCCCHHHHHHHC YTVTKHQPEYLYLGIDLIGAMARADEYGLKHKQDKSLRSVLRRYDFARYATDPEMIEAWA EEECCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH AQLANQVYWLRQLGEQDVVNAFTDAFRTTYPDNQDKKLSPQQYSNKIYGMTHIILGDSQY HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEEEEECCHHH YQKQVNEADHQWIYDYFRDNIDTIILRSKEDVIAEVGISFLLAGLDSDPVVEKTRQAIQS HHHHHCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AINTQQGMIPSVEGDYDLKYGEHRNVLAIMLLDWQGVHQAPTIQNQPQVFESLPYGLVSK HHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCHHHCC H C >Mature Secondary Structure MRIRPISLAVLLSCSLAFQAQASQEAPVLTYSQSAQLIKDTYESQLYTLPAFREGHFGLR CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHEEECCCCCCCCHHHH MYRQTLNDKYLPAVWTDMAQVANRLNHFANEVTAPEQIFLYSEARLATYHDKEDERSQRR HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHEECCCCHHHHHHHC YTVTKHQPEYLYLGIDLIGAMARADEYGLKHKQDKSLRSVLRRYDFARYATDPEMIEAWA EEECCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH AQLANQVYWLRQLGEQDVVNAFTDAFRTTYPDNQDKKLSPQQYSNKIYGMTHIILGDSQY HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEEEEECCHHH YQKQVNEADHQWIYDYFRDNIDTIILRSKEDVIAEVGISFLLAGLDSDPVVEKTRQAIQS HHHHHCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AINTQQGMIPSVEGDYDLKYGEHRNVLAIMLLDWQGVHQAPTIQNQPQVFESLPYGLVSK HHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCHHHCC H C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA