Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977913

Identifier: 156977913

GI number: 156977913

Start: 1842819

End: 1843430

Strand: Direct

Name: 156977913

Synonym: VIBHAR_06708

Alternate gene names: NA

Gene position: 1842819-1843430 (Clockwise)

Preceding gene: 156977908

Following gene: 156977915

Centisome position: 83.61

GC content: 44.93

Gene sequence:

>612_bases
ATGCAAAGTTCTAAACAGGCAAAACAATCCGCTGACGCTAACCAACTACTTAGCGAGCTCGCGGTGCACGCCTTATTACA
CCTGCACTTCAAAATCCGCGCATCATCGCGAATGCTTCCCCTTAAAGAACGCAACGATCTATTGCAAAAGTGGCTCAAGC
CTAAGCTCAAAAGCAATCGCTACAAACTGATTAAAAAGCCATTAAAGTCTTTGACTCAACAAGCAAAAGGGGAAAATGGC
AATTTAGAAGCTTTACTTGAACGTTGTGTAGGTGCCGATAAACCTGGTAACCCGCAGCCTCACCTTGATAGCTACCTGCT
GCTGATCAACGAAGTCGAGAAAAAATTAGGCACGACGGTAATGCTATCTCGTCCTAAAGATGTCGACTTATCTCACGACC
AACACGGTTGTTTGCTGTGTGTGCTGTCTGATAACTTAAACCAACACTTCGACGATAATAACGCCCTAATCGCACCTATT
TCGATGCTTTTCCGTGGCCCTATGAGTCAACGCTCTCTGTTCCTAGGCAGTATATACGCGAGCAATACCTTCAATTACGA
AGTGCTGTACCAAGACGAGCAATTTGTGCGAATAACGCTAGATTTGGCGTAA

Upstream 100 bases:

>100_bases
AATTGGTAGACACGCTAGCATGAGGTGCTAGTGCCTTAGGTGTGAGGGTTCGAGTCCCTCTCTCGGCACCATTCCTTTCT
TTCAAAGAATTTAGAGTGTA

Downstream 100 bases:

>100_bases
TACGACACTCAGATGAATCAAAAAAAGCCGCGAAATTCGCGGCTTTTTGCTTAATTAACGTTTATCAATGTCATTAACGA
CCCACAGAATTATTAATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MQSSKQAKQSADANQLLSELAVHALLHLHFKIRASSRMLPLKERNDLLQKWLKPKLKSNRYKLIKKPLKSLTQQAKGENG
NLEALLERCVGADKPGNPQPHLDSYLLLINEVEKKLGTTVMLSRPKDVDLSHDQHGCLLCVLSDNLNQHFDDNNALIAPI
SMLFRGPMSQRSLFLGSIYASNTFNYEVLYQDEQFVRITLDLA

Sequences:

>Translated_203_residues
MQSSKQAKQSADANQLLSELAVHALLHLHFKIRASSRMLPLKERNDLLQKWLKPKLKSNRYKLIKKPLKSLTQQAKGENG
NLEALLERCVGADKPGNPQPHLDSYLLLINEVEKKLGTTVMLSRPKDVDLSHDQHGCLLCVLSDNLNQHFDDNNALIAPI
SMLFRGPMSQRSLFLGSIYASNTFNYEVLYQDEQFVRITLDLA
>Mature_203_residues
MQSSKQAKQSADANQLLSELAVHALLHLHFKIRASSRMLPLKERNDLLQKWLKPKLKSNRYKLIKKPLKSLTQQAKGENG
NLEALLERCVGADKPGNPQPHLDSYLLLINEVEKKLGTTVMLSRPKDVDLSHDQHGCLLCVLSDNLNQHFDDNNALIAPI
SMLFRGPMSQRSLFLGSIYASNTFNYEVLYQDEQFVRITLDLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23005; Mature: 23005

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSSKQAKQSADANQLLSELAVHALLHLHFKIRASSRMLPLKERNDLLQKWLKPKLKSNR
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHCHHHCCCH
YKLIKKPLKSLTQQAKGENGNLEALLERCVGADKPGNPQPHLDSYLLLINEVEKKLGTTV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCEE
MLSRPKDVDLSHDQHGCLLCVLSDNLNQHFDDNNALIAPISMLFRGPMSQRSLFLGSIYA
EEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHEE
SNTFNYEVLYQDEQFVRITLDLA
CCCCCEEEEECCCEEEEEEEEEC
>Mature Secondary Structure
MQSSKQAKQSADANQLLSELAVHALLHLHFKIRASSRMLPLKERNDLLQKWLKPKLKSNR
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHCHHHCCCH
YKLIKKPLKSLTQQAKGENGNLEALLERCVGADKPGNPQPHLDSYLLLINEVEKKLGTTV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCEE
MLSRPKDVDLSHDQHGCLLCVLSDNLNQHFDDNNALIAPISMLFRGPMSQRSLFLGSIYA
EEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHEE
SNTFNYEVLYQDEQFVRITLDLA
CCCCCEEEEECCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA