| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977653
Identifier: 156977653
GI number: 156977653
Start: 1595505
End: 1597037
Strand: Reverse
Name: 156977653
Synonym: VIBHAR_06441
Alternate gene names: NA
Gene position: 1597037-1595505 (Counterclockwise)
Preceding gene: 156977654
Following gene: 156977646
Centisome position: 72.46
GC content: 48.53
Gene sequence:
>1533_bases ATGAAAAAAACGCCAGTTATCAACCCAGAAAGCCAAGATGTTGCCGAGCTACAAGCGATGGTGAAAGCGCTGATGGTGTC AGAAAGCCAATGGAAACAAGAGCGTCAATCTCTGCTTGAGCAACTCAAACTTGCTTTCGACCGTCAGTTCGCAAAACGCT CGGAGGCGTTAAAGCCTTACGATGAATCTCAAGGTGACCTCTTCAACGAAGTGGAATGTGAAGCCGCTAAGGAAGAAGAG GTTGAAGTGGTCACGACGACCACTACAACGAAGAAGCGTGGTAAACGCAAGCCCCTTCCAAAGACTTTGCCTCGTGAGGT TATCGAACTCGATTTAGACGACCATGAAAAACAGTGTGCCTGCTGCCAACATAGTCTGCATAAAATCGGTGAAGACCGTA GTGAGAAACTTGAGTTCTCACCAGCAGTGCTCAAAGTGCTGGAATATGTTCGTCCTAAGTATGCTTGTCGTCAGTGCGAG CAAACTGAAGACAACAGCCACATCGTTCAAAAGCCAGCGCCTCAGAGCATCATCCCTAAAAGCTTCGCGACAGAAAGCTT GCTGGCCAATATCATCCTTGGTAAATATCAATACGCAATGCCCCTTTACCGCCAAGAGTCGCTGTTTACTCAGTCGGGTA TTGAGCTATCGCGAACTACCATGGCAAGGTGGGTTATCCAAGTCAGTGAGAAGTTCAAACCCCTCTATGCCGCCTTAAAA GAGCATCTACTTCAACAAGTGGTGGTTCAGGCGGATGAAACGCCGCTCAATGTCCTTAAAGAAGATAAAAAGTGTTATAT GTGGCTCTACTGCTCGGGCGCAGACTCGCCCGACGCTGCACTGCCGAATGTAAAGAATATCGCCTTGTACGACTATCAAA ACAGTCGCGCGAGGGCATGCCCTGTTGCCTTCTTGGGGGATTACAGTGGTTATCTGCAAACCGATGGCTATGGTGCCTAT GATGGTCTTCATCACGTAACCAATGTGGGTTGCTTGGCGCATGCACGGCGTAAGTTCATGGATGCTAAGAAGCTTCAAGG TAAAGGTAAGTCAGGCAAAGCAGATAAAGCGCTGGCCAAAATCCAGAAGCTCTATGGGATAGAATCGTGCTTAAAAGGTG CGACTGTCGAAACACGAAAAGCAGAACGTCAACTGCATGCCAAGCCGATACTGGATGAGCTGCACGACTGGATGACGTCT CAACAAGTGCTAGCGTCTAGCTCGTTGGGCAAGGCGATAAAATACACGCTCGGCCAATGGCCCAAGCTCATCCGCTATAT CGATGATGGTCATTTATCTATCGATAATAATCGTGCTGAACGCGCCATTAAACCGCTGGTCATTGGCAGAAAAAATTGGC TGTTCTCAAACACACCAAATGGTGCTGATGCGAGCGCGATGCTTTACAGCATCGTCGAGACGGCGAAAGCCAACGGCCTT ATCCTCTACGACTACATGGTCAAGTGCATGAAAGAGCTCGCGAAAGCGGAGCCTGATATCGATGCGCTCCTACCTTGGAA CTTCAAATATTAA
Upstream 100 bases:
>100_bases GCCATAAACCCGTTAAAATAAACGATTTTACAATGACTTAATTGATAATAAAGCCTTATCTACCAAGCGTGAATGGCATG ATTTTAGTATAATAAATGCC
Downstream 100 bases:
>100_bases CAACATCGCCCCGTGGGTTCATGGGGCGTTTACGGTGTAAGCAACTTTGCTGTTCGTTGTTATGGGTGCGCACCAATGAA GCGGCTAATCAAAGCAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MKKTPVINPESQDVAELQAMVKALMVSESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLFNEVECEAAKEEE VEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHEKQCACCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCE QTEDNSHIVQKPAPQSIIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLYAALK EHLLQQVVVQADETPLNVLKEDKKCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARACPVAFLGDYSGYLQTDGYGAY DGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAKIQKLYGIESCLKGATVETRKAERQLHAKPILDELHDWMTS QQVLASSSLGKAIKYTLGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAKANGL ILYDYMVKCMKELAKAEPDIDALLPWNFKY
Sequences:
>Translated_510_residues MKKTPVINPESQDVAELQAMVKALMVSESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLFNEVECEAAKEEE VEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHEKQCACCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCE QTEDNSHIVQKPAPQSIIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLYAALK EHLLQQVVVQADETPLNVLKEDKKCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARACPVAFLGDYSGYLQTDGYGAY DGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAKIQKLYGIESCLKGATVETRKAERQLHAKPILDELHDWMTS QQVLASSSLGKAIKYTLGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAKANGL ILYDYMVKCMKELAKAEPDIDALLPWNFKY >Mature_510_residues MKKTPVINPESQDVAELQAMVKALMVSESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLFNEVECEAAKEEE VEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHEKQCACCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCE QTEDNSHIVQKPAPQSIIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLYAALK EHLLQQVVVQADETPLNVLKEDKKCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARACPVAFLGDYSGYLQTDGYGAY DGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAKIQKLYGIESCLKGATVETRKAERQLHAKPILDELHDWMTS QQVLASSSLGKAIKYTLGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAKANGL ILYDYMVKCMKELAKAEPDIDALLPWNFKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004291 [H]
Pfam domain/function: PF03050 Transposase_25 [H]
EC number: NA
Molecular weight: Translated: 57719; Mature: 57719
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTPVINPESQDVAELQAMVKALMVSESQWKQERQSLLEQLKLAFDRQFAKRSEALKPY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DESQGDLFNEVECEAAKEEEVEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHEKQCA CCCCCCHHHHHHHCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHH CCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCEQTEDNSHIVQKPAPQSIIPK HHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCEEECCCCCCCCCCH SFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLYAALK HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EHLLQQVVVQADETPLNVLKEDKKCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARAC HHHHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCC PVAFLGDYSGYLQTDGYGAYDGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAK CCCEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH IQKLYGIESCLKGATVETRKAERQLHAKPILDELHDWMTSQQVLASSSLGKAIKYTLGQW HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAKANGL HHHHHHHCCCCEEECCCHHHHHHHHHEECCCCCEECCCCCCCHHHHHHHHHHHHHCCCCE ILYDYMVKCMKELAKAEPDIDALLPWNFKY EEHHHHHHHHHHHHHCCCCCCEECCCCCCC >Mature Secondary Structure MKKTPVINPESQDVAELQAMVKALMVSESQWKQERQSLLEQLKLAFDRQFAKRSEALKPY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DESQGDLFNEVECEAAKEEEVEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHEKQCA CCCCCCHHHHHHHCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHH CCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCEQTEDNSHIVQKPAPQSIIPK HHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCEEECCCCCCCCCCH SFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLYAALK HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EHLLQQVVVQADETPLNVLKEDKKCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARAC HHHHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCC PVAFLGDYSGYLQTDGYGAYDGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAK CCCEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH IQKLYGIESCLKGATVETRKAERQLHAKPILDELHDWMTSQQVLASSSLGKAIKYTLGQW HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAKANGL HHHHHHHCCCCEEECCCHHHHHHHHHEECCCCCEECCCCCCCHHHHHHHHHHHHHCCCCE ILYDYMVKCMKELAKAEPDIDALLPWNFKY EEHHHHHHHHHHHHHCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]