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The map label for this gene is yjeF [H]

Identifier: 156977439

GI number: 156977439

Start: 1407334

End: 1408872

Strand: Reverse

Name: yjeF [H]

Synonym: VIBHAR_06226

Alternate gene names: 156977439

Gene position: 1408872-1407334 (Counterclockwise)

Preceding gene: 156977440

Following gene: 156977437

Centisome position: 63.92

GC content: 48.67

Gene sequence:

>1539_bases
ATGGATTTTAATCTCGCCCTCAAGCTCTATACCGCAGAGCAAGTCAGAAACGGAGAAGTGATCGCAGCTCAAATGGCTGG
AGTCTCAATGTACAGTTTGATGCAGCGTGCTGGCATGGCGGTTTACGAGCAATTTCTCCACCTTTATCCAAAGGCGCGAA
CTGTGCTGGTGGTTTGTGGAAAAGGGAACAACGGGGGGGATGGGTATGTGTTTGCTACTCTTGCAAAACAGGCGCAGCTA
AACGTCCGAGTCTTCCAGTTAGGGGACACCACAGCATTGAAAGGGGATGCGCTGCGAGCATTCGAAGATTGGCAAACGAT
CGATGGTGAGAACAGCAGCTGGAGCGATTGGCACACAGCGCTTTTGGAGGCGGACGTTATCATTGATGCCATGCTTGGTA
CAGGGCTTTCTGGTGAAGTAAGGCATGAGTATCGCCGCTACATTGATCAAGTTAATCAAATTCATTGTCCAGTCATCTCC
ATCGATATTCCTTCTGGTTTAAGTGCGGACACCGGTGCTGTGCTCGGAGATGCCATACAAGCGGATCATACGGTGACCTT
TATTGGTGTGAAGCAAGGCTTATGCACAGGGCAGGCGAGAGACTACGTTGGTGAGCTGCATTTTTCTGGCTTGGGTGTAA
ACGTTGAGTTTGAGTCGATTGAAGAAGAAAGTGCGTTGGGCATTGACCATCGAATCATCAAAAGGCTACTACCAAAAAGA
AAAGCCACAGCCCACAAAGGGAATAATGGCAAGCTCTTATGTATAGGTGGTAATCAAGGCATGTCTGGCGCCATTCGTTT
GTGCGCCTCAGCCGCAGCAAGAACAGGGGCAGGACTTACGGCTGCTCTGACACACCCGAGCTCTTTATTGCCACTGCAAG
TTGGTGCGCCAGAAGTCATGAGTCAGGCTATTACGTTTGATGAGTTAAAAGAGGTAGATAACGCACTGATTAAACGGACA
CGTTGGGCGGATACCTTAGCTTTCGGTCCTGGTTTCGGTGAGGATGAATGGGCGCATCAGGCATACCAGCTCTTATCTCA
GCAACACAAACCTAAGGTCGTGGATGCTGATGGACTCAATATTCTTGCGATGCTGAGTCAGCGTAACGACGTAGTGGTTT
TACGAGATGAGCAACGCGTTATGACACCACACCCAGGAGAGGCAGCCCGTTTACTTAATGTCTCAACTAAGGAAATAGAG
CAAGACCGTTTTGCCGCCGCAAGACAACTTCATGAACGTTATGGTGGTGTTGTTGTTCTTAAAGGGGCGGGTACGCTTAT
CTATGATGGTGTGAGAATGTACATTTGTCTTGCCGGAAATCCGGGAATGGCCAGTGGCGGTATGGGGGATGTGTTATCCG
GTGTGATTGCCGCACTGCTTGCCAAAGGGTTACCTATTGCTGTTGCTGCACGTTTGGGAGTGATGCTCCATAGTCACGCT
GCGGACATTAATGTTCAACAAAAAGGCGAAATTGGGTTATTAGCAAGTGATGTTATTGAATCACTTCGAGACGCCATTAA
CTTAAAAAACGATGATTGA

Upstream 100 bases:

>100_bases
GCAAAAATAAAGCTTGAGAAAATAAACACAGCAAAAGCCGAGGTTCGCCTCGGCTTTTTCGTATACTTAAATCGTGTCTT
TTGAACCGTAGAATATCGTT

Downstream 100 bases:

>100_bases
ACGGAGAAAACAGCGCTAAAAATGGCAAAAGAGTGATGTGAAGCGTGAAAAAATCAGGAAATATTTTTGTTTGAACCAAG
GATTAAAGACCGTTTGATGC

Product: sugar kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MDFNLALKLYTAEQVRNGEVIAAQMAGVSMYSLMQRAGMAVYEQFLHLYPKARTVLVVCGKGNNGGDGYVFATLAKQAQL
NVRVFQLGDTTALKGDALRAFEDWQTIDGENSSWSDWHTALLEADVIIDAMLGTGLSGEVRHEYRRYIDQVNQIHCPVIS
IDIPSGLSADTGAVLGDAIQADHTVTFIGVKQGLCTGQARDYVGELHFSGLGVNVEFESIEEESALGIDHRIIKRLLPKR
KATAHKGNNGKLLCIGGNQGMSGAIRLCASAAARTGAGLTAALTHPSSLLPLQVGAPEVMSQAITFDELKEVDNALIKRT
RWADTLAFGPGFGEDEWAHQAYQLLSQQHKPKVVDADGLNILAMLSQRNDVVVLRDEQRVMTPHPGEAARLLNVSTKEIE
QDRFAAARQLHERYGGVVVLKGAGTLIYDGVRMYICLAGNPGMASGGMGDVLSGVIAALLAKGLPIAVAARLGVMLHSHA
ADINVQQKGEIGLLASDVIESLRDAINLKNDD

Sequences:

>Translated_512_residues
MDFNLALKLYTAEQVRNGEVIAAQMAGVSMYSLMQRAGMAVYEQFLHLYPKARTVLVVCGKGNNGGDGYVFATLAKQAQL
NVRVFQLGDTTALKGDALRAFEDWQTIDGENSSWSDWHTALLEADVIIDAMLGTGLSGEVRHEYRRYIDQVNQIHCPVIS
IDIPSGLSADTGAVLGDAIQADHTVTFIGVKQGLCTGQARDYVGELHFSGLGVNVEFESIEEESALGIDHRIIKRLLPKR
KATAHKGNNGKLLCIGGNQGMSGAIRLCASAAARTGAGLTAALTHPSSLLPLQVGAPEVMSQAITFDELKEVDNALIKRT
RWADTLAFGPGFGEDEWAHQAYQLLSQQHKPKVVDADGLNILAMLSQRNDVVVLRDEQRVMTPHPGEAARLLNVSTKEIE
QDRFAAARQLHERYGGVVVLKGAGTLIYDGVRMYICLAGNPGMASGGMGDVLSGVIAALLAKGLPIAVAARLGVMLHSHA
ADINVQQKGEIGLLASDVIESLRDAINLKNDD
>Mature_512_residues
MDFNLALKLYTAEQVRNGEVIAAQMAGVSMYSLMQRAGMAVYEQFLHLYPKARTVLVVCGKGNNGGDGYVFATLAKQAQL
NVRVFQLGDTTALKGDALRAFEDWQTIDGENSSWSDWHTALLEADVIIDAMLGTGLSGEVRHEYRRYIDQVNQIHCPVIS
IDIPSGLSADTGAVLGDAIQADHTVTFIGVKQGLCTGQARDYVGELHFSGLGVNVEFESIEEESALGIDHRIIKRLLPKR
KATAHKGNNGKLLCIGGNQGMSGAIRLCASAAARTGAGLTAALTHPSSLLPLQVGAPEVMSQAITFDELKEVDNALIKRT
RWADTLAFGPGFGEDEWAHQAYQLLSQQHKPKVVDADGLNILAMLSQRNDVVVLRDEQRVMTPHPGEAARLLNVSTKEIE
QDRFAAARQLHERYGGVVVLKGAGTLIYDGVRMYICLAGNPGMASGGMGDVLSGVIAALLAKGLPIAVAARLGVMLHSHA
ADINVQQKGEIGLLASDVIESLRDAINLKNDD

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI119709830, Length=240, Percent_Identity=25.4166666666667, Blast_Score=72, Evalue=9e-13,
Organism=Escherichia coli, GI1790609, Length=513, Percent_Identity=42.8849902534113, Blast_Score=375, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 55000; Mature: 55000

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFNLALKLYTAEQVRNGEVIAAQMAGVSMYSLMQRAGMAVYEQFLHLYPKARTVLVVCG
CCCEEEEEEEEHHHCCCCCEEEEHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEEE
KGNNGGDGYVFATLAKQAQLNVRVFQLGDTTALKGDALRAFEDWQTIDGENSSWSDWHTA
CCCCCCCCEEEEEEHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHH
LLEADVIIDAMLGTGLSGEVRHEYRRYIDQVNQIHCPVISIDIPSGLSADTGAVLGDAIQ
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEECCEEEEECCCCCCCCCCHHHHHHHC
ADHTVTFIGVKQGLCTGQARDYVGELHFSGLGVNVEFESIEEESALGIDHRIIKRLLPKR
CCCEEEEEEECCCCCCCCHHHHHHHHEECEEEEEEEHHCCCCHHHCCHHHHHHHHHCCCH
KATAHKGNNGKLLCIGGNQGMSGAIRLCASAAARTGAGLTAALTHPSSLLPLQVGAPEVM
HHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCHHHH
SQAITFDELKEVDNALIKRTRWADTLAFGPGFGEDEWAHQAYQLLSQQHKPKVVDADGLN
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCE
ILAMLSQRNDVVVLRDEQRVMTPHPGEAARLLNVSTKEIEQDRFAAARQLHERYGGVVVL
EEEEECCCCCEEEEECCCEECCCCCCCHHHEECCHHHHHHHHHHHHHHHHHHHHCCEEEE
KGAGTLIYDGVRMYICLAGNPGMASGGMGDVLSGVIAALLAKGLPIAVAARLGVMLHSHA
ECCCCEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
ADINVQQKGEIGLLASDVIESLRDAINLKNDD
CCCCEECCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDFNLALKLYTAEQVRNGEVIAAQMAGVSMYSLMQRAGMAVYEQFLHLYPKARTVLVVCG
CCCEEEEEEEEHHHCCCCCEEEEHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEEE
KGNNGGDGYVFATLAKQAQLNVRVFQLGDTTALKGDALRAFEDWQTIDGENSSWSDWHTA
CCCCCCCCEEEEEEHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHH
LLEADVIIDAMLGTGLSGEVRHEYRRYIDQVNQIHCPVISIDIPSGLSADTGAVLGDAIQ
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEECCEEEEECCCCCCCCCCHHHHHHHC
ADHTVTFIGVKQGLCTGQARDYVGELHFSGLGVNVEFESIEEESALGIDHRIIKRLLPKR
CCCEEEEEEECCCCCCCCHHHHHHHHEECEEEEEEEHHCCCCHHHCCHHHHHHHHHCCCH
KATAHKGNNGKLLCIGGNQGMSGAIRLCASAAARTGAGLTAALTHPSSLLPLQVGAPEVM
HHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCHHHH
SQAITFDELKEVDNALIKRTRWADTLAFGPGFGEDEWAHQAYQLLSQQHKPKVVDADGLN
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCE
ILAMLSQRNDVVVLRDEQRVMTPHPGEAARLLNVSTKEIEQDRFAAARQLHERYGGVVVL
EEEEECCCCCEEEEECCCEECCCCCCCHHHEECCHHHHHHHHHHHHHHHHHHHHCCEEEE
KGAGTLIYDGVRMYICLAGNPGMASGGMGDVLSGVIAALLAKGLPIAVAARLGVMLHSHA
ECCCCEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
ADINVQQKGEIGLLASDVIESLRDAINLKNDD
CCCCEECCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7511774 [H]