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The map label for this gene is 156977440

Identifier: 156977440

GI number: 156977440

Start: 1408983

End: 1409423

Strand: Reverse

Name: 156977440

Synonym: VIBHAR_06227

Alternate gene names: NA

Gene position: 1409423-1408983 (Counterclockwise)

Preceding gene: 156977441

Following gene: 156977439

Centisome position: 63.95

GC content: 46.71

Gene sequence:

>441_bases
ATGCTGAACTTACCTGCAGAATTTGAACAATTCCATTGGATGGTCGACATGGTGCAGAATGTCGACATGGGTTTAGTTGT
GATCGATAAAGACTACAACGTTCAAGTGTGGAACGGCTTCATGACGCACCACAGCGGCTTACAATCTCACGAAGCCATTG
GGCGCTCAATCTTTGATATCTTTCCTGAGATCCCACAAGAGTGGTTCAAGCTAAAAACCAAGCCTGTTTATGATTTAGGG
TGTCGAAGCTTCATCACATGGCGCCAGCGTCCGTATTTGTTCCGTTGCCGCAACGTTCGACCAGTGACGCAACAAGCGGA
GTTCATGTATCAAAACGTGACGCTTAACCCAATGCGCACCCCAACAGGGAAAATCAACTCACTGTTTTTGTCGATTCAAG
ATGCAACGGCAGAAGCTTTGATGTCTCAGCAGCAAACTTGA

Upstream 100 bases:

>100_bases
TTGAAGGCACTTCCATCCGTTGTGACCTACTGTTTATGTTTGTTGATGAGTCACTGCCGTTGCTGGATAACAAATTGTCG
TACCTAATGGAGGATTTCTA

Downstream 100 bases:

>100_bases
TGTCGCAACAGCAAAAATAAAGCTTGAGAAAATAAACACAGCAAAAGCCGAGGTTCGCCTCGGCTTTTTCGTATACTTAA
ATCGTGTCTTTTGAACCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Diguanylate Cyclase With PAS/PAC Sensor; GGDEF Domain-Containing Protein; Sensory Box/GGDEF Family Protein; Sensory Box/GGDEF Protein; Sensor Histidine Kinase; PAS/PAC Sensor Protein; Response Regulator Receiver Domain Protein; Response Regulator; PAS/PAC Domain-Containing Protein; PAS/PAC Sensor Signal Transduction Histidine Kinase; GGDEF Domain Protein; Sensor Protein; GGDEF Protein; Sensory Box Protein; PAS Domain-Containing Protein; Signal Transduction Histidine Kinase; Response Regulator Receiver Protein

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MLNLPAEFEQFHWMVDMVQNVDMGLVVIDKDYNVQVWNGFMTHHSGLQSHEAIGRSIFDIFPEIPQEWFKLKTKPVYDLG
CRSFITWRQRPYLFRCRNVRPVTQQAEFMYQNVTLNPMRTPTGKINSLFLSIQDATAEALMSQQQT

Sequences:

>Translated_146_residues
MLNLPAEFEQFHWMVDMVQNVDMGLVVIDKDYNVQVWNGFMTHHSGLQSHEAIGRSIFDIFPEIPQEWFKLKTKPVYDLG
CRSFITWRQRPYLFRCRNVRPVTQQAEFMYQNVTLNPMRTPTGKINSLFLSIQDATAEALMSQQQT
>Mature_146_residues
MLNLPAEFEQFHWMVDMVQNVDMGLVVIDKDYNVQVWNGFMTHHSGLQSHEAIGRSIFDIFPEIPQEWFKLKTKPVYDLG
CRSFITWRQRPYLFRCRNVRPVTQQAEFMYQNVTLNPMRTPTGKINSLFLSIQDATAEALMSQQQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17176; Mature: 17176

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLPAEFEQFHWMVDMVQNVDMGLVVIDKDYNVQVWNGFMTHHSGLQSHEAIGRSIFDI
CCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECHHHHCCCCHHHHHHHHHHHHH
FPEIPQEWFKLKTKPVYDLGCRSFITWRQRPYLFRCRNVRPVTQQAEFMYQNVTLNPMRT
HHHCHHHHHHCCCCCCHHHCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCC
PTGKINSLFLSIQDATAEALMSQQQT
CCCCCEEEEEEECHHHHHHHHHCCCC
>Mature Secondary Structure
MLNLPAEFEQFHWMVDMVQNVDMGLVVIDKDYNVQVWNGFMTHHSGLQSHEAIGRSIFDI
CCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECHHHHCCCCHHHHHHHHHHHHH
FPEIPQEWFKLKTKPVYDLGCRSFITWRQRPYLFRCRNVRPVTQQAEFMYQNVTLNPMRT
HHHCHHHHHHCCCCCCHHHCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCC
PTGKINSLFLSIQDATAEALMSQQQT
CCCCCEEEEEEECHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA